FFCP PHASE1:Mm9::chr8:93842016..93842018,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=243|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:93842016..93842018,+|id=chr8:93842016..93842018,+|ontology_enrichment_celltype=CL:0000393!9.93e-15!39;CL:0000211!9.93e-15!39;CL:0000540!3.68e-12!33;CL:0000047!3.68e-12!33;CL:0000031!3.68e-12!33;CL:0000404!3.68e-12!33;CL:0000055!9.38e-11!50;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0002319!5.38e-09!43;CL:0000117!8.64e-08!23;CL:0000337!8.64e-08!23;CL:0002321!1.70e-07!70;CL:0000220!1.70e-07!70|ontology_enrichment_celltype_v019_2=CL:0000107,8.26e-18,9;CL:0000393,6.19e-10,39;CL:0000211,6.19e-10,39;CL:0000540,9.43e-10,33;CL:0000047,9.43e-10,33;CL:0000031,9.43e-10,33;CL:0000404,9.43e-10,33;CL:0002321,8.53e-09,70;CL:0000723,1.46e-08,91;CL:0000048,1.46e-08,91;CL:0000034,7.07e-08,97;CL:0002293,1.97e-07,3;CL:0002319,3.48e-07,43;CL:0000221,5.43e-07,44;CL:0000133,5.43e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.26e-18,9;UBERON:0000010,1.71e-14,11;UBERON:0010313,3.29e-14,3;UBERON:0002342,3.29e-14,3;UBERON:0002005,3.29e-14,3;UBERON:0005428,3.29e-14,3;UBERON:0005062,3.29e-14,3;UBERON:0000013,3.01e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.93684985162364,0.140788722151667,1.40438715793196,0.171217968225505,0.398860794976682,0.171200729931206,1.31130603628496,0,0.202475267389826,0,0.315462165358238,0,0,2.21112554392781,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.917733760808408,0,0,0,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,0,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.958454710182364,0.919218786610021,0,0.638436690425939,0.614426133024974,0.659431438650969,0.365950574409639,1.56274011167028,0.279182999001381,0.56276261003168,1.06958773443767,0.883885756421003,0.427115042397309,0.372798891650601,0.37863096666592,0.226714680320357,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.842666520790511,0.511290967734173,0.779358013808606,0.70667914902068,0.422530259330042,2.56652954828636,10.1922095882658,0,0,0.253359865475099,0,0.79928715803342,0,0.29688427812965,0,0.304465478312141,0.461230994512117,0.301445281105245,0,0,0.247194967734374,0,0,0.323533699894818,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0,0.36012412292203,0,0.196764231747404,0.462801338662135,0,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0.678980343100753,0.469380496577004,0.837531287209079,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,1.26203287766503,2.34263246577983,1.50796378412959,1.19484398976276,0.668396022247182,0.566153061577665,2.42886421004937,2.04579100537918,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.87345025498471,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=243 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:93842016..93842018,+ | |||
|description=CAGE_peak_at_chr8:93842016..93842018,+ | |||
|id=chr8:93842016..93842018,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.93e-15!39;CL:0000211!9.93e-15!39;CL:0000540!3.68e-12!33;CL:0000047!3.68e-12!33;CL:0000031!3.68e-12!33;CL:0000404!3.68e-12!33;CL:0000055!9.38e-11!50;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0002319!5.38e-09!43;CL:0000117!8.64e-08!23;CL:0000337!8.64e-08!23;CL:0002321!1.70e-07!70;CL:0000220!1.70e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.26e-18,9;CL:0000393,6.19e-10,39;CL:0000211,6.19e-10,39;CL:0000540,9.43e-10,33;CL:0000047,9.43e-10,33;CL:0000031,9.43e-10,33;CL:0000404,9.43e-10,33;CL:0002321,8.53e-09,70;CL:0000723,1.46e-08,91;CL:0000048,1.46e-08,91;CL:0000034,7.07e-08,97;CL:0002293,1.97e-07,3;CL:0002319,3.48e-07,43;CL:0000221,5.43e-07,44;CL:0000133,5.43e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.26e-18,9;UBERON:0000010,1.71e-14,11;UBERON:0010313,3.29e-14,3;UBERON:0002342,3.29e-14,3;UBERON:0002005,3.29e-14,3;UBERON:0005428,3.29e-14,3;UBERON:0005062,3.29e-14,3;UBERON:0000013,3.01e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.93684985162364,0.140788722151667,1.40438715793196,0.171217968225505,0.398860794976682,0.171200729931206,1.31130603628496,0,0.202475267389826,0,0.315462165358238,0,0,2.21112554392781,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.917733760808408,0,0,0,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,0,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.958454710182364,0.919218786610021,0,0.638436690425939,0.614426133024974,0.659431438650969,0.365950574409639,1.56274011167028,0.279182999001381,0.56276261003168,1.06958773443767,0.883885756421003,0.427115042397309,0.372798891650601,0.37863096666592,0.226714680320357,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.842666520790511,0.511290967734173,0.779358013808606,0.70667914902068,0.422530259330042,2.56652954828636,10.1922095882658,0,0,0.253359865475099,0,0.79928715803342,0,0.29688427812965,0,0.304465478312141,0.461230994512117,0.301445281105245,0,0,0.247194967734374,0,0,0.323533699894818,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0,0.36012412292203,0,0.196764231747404,0.462801338662135,0,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0.678980343100753,0.469380496577004,0.837531287209079,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,1.26203287766503,2.34263246577983,1.50796378412959,1.19484398976276,0.668396022247182,0.566153061577665,2.42886421004937,2.04579100537918,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.87345025498471,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.256100609619477,0,0,0,0,0.412085900803307,0.294397840268795,0.685738504770831,0,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr8:93842016..93842018,+ | |||
}} |
Latest revision as of 08:18, 4 August 2015
Short description: | p@chr8:93842016..93842018, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:93842016..93842018, + |
Coexpression cluster: | MCL_coexpression_mm9:243 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.26e-18 | 9 |
electrically responsive cell | 6.19e-10 | 39 |
electrically active cell | 6.19e-10 | 39 |
neuron | 9.43e-10 | 33 |
neuronal stem cell | 9.43e-10 | 33 |
neuroblast | 9.43e-10 | 33 |
electrically signaling cell | 9.43e-10 | 33 |
embryonic cell | 8.53e-09 | 70 |
somatic stem cell | 1.46e-08 | 91 |
multi fate stem cell | 1.46e-08 | 91 |
stem cell | 7.07e-08 | 97 |
epithelial cell of thymus | 1.97e-07 | 3 |
neural cell | 3.48e-07 | 43 |
ectodermal cell | 5.43e-07 | 44 |
neurectodermal cell | 5.43e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.26e-18 | 9 |
peripheral nervous system | 1.71e-14 | 11 |
neural crest-derived structure | 3.29e-14 | 3 |
neural crest | 3.29e-14 | 3 |
enteric nervous system | 3.29e-14 | 3 |
vagal neural crest | 3.29e-14 | 3 |
neural fold | 3.29e-14 | 3 |
sympathetic nervous system | 3.01e-07 | 3 |