FFCP PHASE1:Mm9::chr11:30097993..30098009,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:30097993..30098009,-
|short_description=p9@Spnb2
|description=CAGE_peak_9_at_Spnb2_5end
|association_with_transcript=223bp_to_ENSMUST00000039018_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20742 | |EntrezGene=20742 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1960 | |||
|TSSclassifier=NA | |||
|UniProt=F6VV16 | |UniProt=F6VV16 | ||
|association_with_transcript=223bp_to_ENSMUST00000039018_5end | |||
|cluster_id=chr11:30097993..30098009,- | |||
|description=CAGE_peak_9_at_Spnb2_5end | |||
|id=chr11:30097993..30098009,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.91e-07,9;CL:0002251,6.91e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.46e-13!59;UBERON:0000160!1.22e-12!43;UBERON:0004119!4.18e-12!130;UBERON:0000925!4.18e-12!130;UBERON:0006595!4.18e-12!130;UBERON:0001007!8.85e-12!128;UBERON:0001555!8.85e-12!128;UBERON:0007026!8.85e-12!128;UBERON:0004921!5.57e-11!126;UBERON:0004185!5.57e-11!126;UBERON:0004923!5.12e-09!24;UBERON:0000344!7.03e-09!15;UBERON:0001242!5.97e-08!13;UBERON:0000060!5.97e-08!13;UBERON:0001262!5.97e-08!13;UBERON:0004786!5.97e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-21,31;UBERON:0005409,4.20e-20,47;UBERON:0000344,5.58e-12,15;UBERON:0004923,1.52e-11,24;UBERON:0004119,8.16e-11,118;UBERON:0000925,8.16e-11,118;UBERON:0006595,8.16e-11,118;UBERON:0001007,9.42e-11,116;UBERON:0001555,9.42e-11,116;UBERON:0007026,9.42e-11,116;UBERON:0001242,1.16e-10,13;UBERON:0001262,1.16e-10,13;UBERON:0004786,1.16e-10,13;UBERON:0004921,8.06e-10,114;UBERON:0003350,6.91e-07,9;UBERON:0004808,6.91e-07,9;UBERON:0001277,6.91e-07,9 | |||
|phase1_expression=0.960893082628764,10.4692622291808,5.91499011206397,8.16653370528441,10.0179145989269,4.53274034162102,2.80335168714631,1.80772652818207,0.140788722151667,0.936258105287974,0,0,2.56801094896809,3.2345548895029,0,1.01237633694913,0.699561878128147,2.68142840554502,3.97631857456642,1.69755860719212,0.340173160604279,2.6808556824239,1.30599894569468,3.51983330145495,2.98232065387321,5.7423196411502,4.30761996159075,4.09395342103189,10.8313349090133,13.3575968772763,9.09095093686749,0,0,0,1.1554064790051,1.32987716286794,1.42918549383658,8.37063261473815,1.5626706890476,5.75876118371178,5.88231488031014,6.83045484958446,4.85510353031154,0,0,0,0,0,0.219686182734472,0.194429899074283,0.55994568650145,0,2.68452169692378,2.90144856804538,2.35265659399725,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,2.719885334831,0,1.29955283489534,0.896053774194671,1.12355536105401,0,0,0,0.704217098883403,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,1.48439043634778,5.69663344023778,0,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,6.42706916109372,0.144599356919912,5.30766331169925,0.647067399789637,0.441683036920787,2.42437626567611,14.9113408974498,0.878342391034642,1.04723353406728,11.7510245395952,1.07833612055328,0.599902730993408,1.65191295194984,0,0,0,0,0,0,0,0,1.99051152976149,0.252722758433675,2.10441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.612328492361951,0.768682321709099,0.655912071918102,2.06962696591213,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.823128545631774,0.199034266818493,2.1066395619397,0.772043721344145,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0,0.462801338662135,0,0.536546802799238,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.420579897128254,0.205809224758569,11.2342386214491,8.19796756656987,0.213288250535234,0.232236671860439,1.9330119198314,3.63030344322017,3.7804267453628,5.51654315726422,9.49058123089023,4.77626968699632,4.02136334080431,2.78539060857611,4.874102177978,8.98819408654222,6.48414149624083,5.57595565112228,0.758671603812327,0.685491075658373,0,0.407302655690628,1.74557238450863,1.26244475802573,1.45444035385792,1.62371162777562,0.784993639206874,2.22114895059241,0.592905254174298,0,0.196558995113203,0.224862112384854,1.01430060694251,0.72353147925725,0.763877555344259,0.575392274901621,1.29708181420028,1.09824565275233,0,0.372140947668503,0.624075346229121,0.757736633841335,0.358794827043824,0.964887042726734,0.923765950833023,0,0,0.169745085775188,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.827810238914197,0,0,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,2.06742634534577,0.363533729477506,0.356497378384721,1.26414703174326,0,1.03135543248187,0.680879211507576,0.540183282093931,0.388076051348264,0.428674070063185,1.06404140185364,1.24858172321449,0,0.913394847343798,0.704015124191131,1.48282449604674,1.7642271844397,1.48397627647332,0.968786560175433,0.904693873922338,1.43246812803764,1.80554989719567,7.57850175237612,0,1.36696704638282,1.03193433981611,0.555583582109135,0,1.77702496037333,2.28778173206523,2.71965487990169,2.6590775941495,1.79659965945751,0,0.158167996790568,0.609958401380546,1.18805874903981,1.25452977608681,1.9652630737156,0.809186078308924,1.40510874733071,1.30877970992015,17.3684064211002,4.97071450469541,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0,2.8441000856536,2.02725215290164,0.718976700153791,1.55904987573354,0.537080087002444,0.596044064343795,0.961563596159751,1.77227432609493,1.71642964911851,1.21930890648,0.907435666231565,2.0466154955348,0.865906574762965,1.63627663054197,1.36038230169127,3.10780334723691,8.25367480807176,3.18980771091749,1.35232715822533,0.93841237725591,2.56412273974171,1.71494703263253,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0,0.412070114477788,1.28367683836726,0.252697211763798,1.77435509923168,0.943131706930381,0.468207537349412,0.512201219238954,0.34461281373368,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,0.715308569841963,0.872078499793971,0.846984423737976,0.761531471025089,1.09756783723664,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.689531376628944,0,0.464810523557898,0.771626443924566,0,0.93572643378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| ||
|short_description=p9@Spnb2 | |||
}} | }} |
Latest revision as of 06:30, 27 September 2015
Short description: | p9@Spnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Spnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1960 |
Association with transcript: | 223bp_to_ENSMUST00000039018_5end |
EntrezGene: | Spnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.91e-07 | 9 |
epithelial cell of alimentary canal | 6.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.11e-21 | 31 |
gastrointestinal system | 4.20e-20 | 47 |
mucosa | 5.58e-12 | 15 |
organ component layer | 1.52e-11 | 24 |
endoderm-derived structure | 8.16e-11 | 118 |
endoderm | 8.16e-11 | 118 |
presumptive endoderm | 8.16e-11 | 118 |
digestive system | 9.42e-11 | 116 |
digestive tract | 9.42e-11 | 116 |
primitive gut | 9.42e-11 | 116 |
intestinal mucosa | 1.16e-10 | 13 |
wall of intestine | 1.16e-10 | 13 |
gastrointestinal system mucosa | 1.16e-10 | 13 |
subdivision of digestive tract | 8.06e-10 | 114 |
epithelium of mucosa | 6.91e-07 | 9 |
gastrointestinal system epithelium | 6.91e-07 | 9 |
intestinal epithelium | 6.91e-07 | 9 |