FFCP PHASE1:Mm9::chrX:20126906..20126922,+: Difference between revisions
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{{FFCP|EntrezGene=19733|HGNC=|MCL_coexpression_id=8|UniProt=Q64374|association_with_transcript=0bp_to_ENSMUST00000023832_5end|description=CAGE_peak_1_at_Rgn_5end|id=chrX:20126906..20126922,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.67e-17!22;UBERON:0007499!2.67e-17!22;UBERON:0006925!2.67e-17!22;UBERON:0009497!2.67e-17!22;UBERON:0000015!2.67e-17!22;UBERON:0002423!2.67e-17!22;UBERON:0006235!2.67e-17!22;UBERON:0008835!2.67e-17!22;UBERON:0003894!2.67e-17!22;UBERON:0004161!2.67e-17!22;UBERON:0008836!2.67e-17!22;UBERON:0005172!3.17e-16!49;UBERON:0005173!3.17e-16!49;UBERON:0002417!3.17e-16!49;UBERON:0000916!3.17e-16!49;UBERON:0009854!5.11e-16!23;UBERON:0009856!5.11e-16!23;UBERON:0002365!8.64e-14!25;UBERON:0002330!8.64e-14!25;UBERON:0009569!2.65e-11!66;UBERON:0005177!1.99e-09!85;UBERON:0001007!3.50e-09!128;UBERON:0001555!3.50e-09!128;UBERON:0007026!3.50e-09!128;UBERON:0005256!6.16e-09!47;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126;UBERON:0004119!1.16e-08!130;UBERON:0000925!1.16e-08!130;UBERON:0006595!1.16e-08!130;UBERON:0005409!1.59e-07!59;UBERON:0003914!3.70e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.97e-20,22;UBERON:0007499,9.97e-20,22;UBERON:0006925,9.97e-20,22;UBERON:0009497,9.97e-20,22;UBERON:0000015,9.97e-20,22;UBERON:0002423,9.97e-20,22;UBERON:0006235,9.97e-20,22;UBERON:0008835,9.97e-20,22;UBERON:0003894,9.97e-20,22;UBERON:0004161,9.97e-20,22;UBERON:0008836,9.97e-20,22;UBERON:0009854,1.86e-18,23;UBERON:0009856,1.86e-18,23;UBERON:0002365,3.09e-16,25;UBERON:0002330,3.09e-16,25;UBERON:0005172,5.88e-12,49;UBERON:0005173,5.88e-12,49;UBERON:0002417,5.88e-12,49;UBERON:0000916,5.88e-12,49;UBERON:0005256,1.82e-11,45;UBERON:0005177,1.66e-07,79;UBERON:0009569,3.64e-07,66;UBERON:0003104,6.04e-07,61;UBERON:0009142,6.04e-07,61;UBERON:0000949,9.25e-07,72|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,4.63978026100879,2.2940928106717,0,0.86152399231815,2.58565479223067,0.570070258369122,0.756090389279792,0,0,0,0,1.73310971850765,3.32469290716985,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,1415.39727763438,1162.07100930655,1341.16243121998,726.450034706494,810.48063875908,620.48344814208,0,0,0,0,0,0,0,0,0,0,845.074893800763,0,7.27366481417641,9.36820764537134,19.485790611977,31.59432312408,15.976599898578,5.40908052824242,12.0639927676488,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,1.0108910337347,0,0,0,0,8.28876498096433,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0,0,1.18058539048442,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0.658650345873152,0.671032093801859,0,0,1.32167513193519,2.3800550999719,2.13288250535234,4.87697010906921,9.14958975386863,30.2525286935014,24.016828735246,25.1097826468578,0.474529061544512,2.14108641141214,8.79673230800943,5.76973768919337,4.67913809085888,0,1.08069024937347,1.1948476395262,0.379335801906163,5.48392860526698,0,1.4255592949172,0.581857461502877,0.98190147846446,0.316182685621286,0.147610147979602,0.784993639206874,0,2722.91737979546,40.877050900443,76.461449099036,124.123886036439,151.333650555823,222.606518451481,337.888505313944,518.428439686361,158.73038701276,809.132484665276,935.931024493078,962.35649067075,1118.34302044259,1899.39316216228,1733.51720686224,1249.04627680976,0,1.70542270593436,0.488894929326078,0,0.469380496577004,0,2.61848004974615,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,1.57754109708128,0.390438744296638,0,0,0.891194696329576,0.849229592366497,0.809621403349789,0,0,0,0.141940085208269,3.5613120733451,0,0,0,4.61283208694465,3.62788268357701,0.377210159511796,0,4.30409207121498,3.6179961043551,1.45413491791002,2.85197902707777,1.58018378967908,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,2.68302928352189,0.925972636848558,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,3.81868247206045,1.73984796469624,4.06638934253697,6.48032044930808,2.09088296014469,12.6650286972783,22.9269388854195,72.6523875825703,2.6175594198403,0,0,0,0,0,0,0.258319646955462,0,0,17.4473875690893,0.104859344425711,0,0,0,1.41907650703115,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,3.59122386060928,15.0245573063638,27.2279523116489,50.5167721933437,49.2700602646038,38.8931773652827,39.1466608753899,36.9057091030588,43.4639204233732,38.021894983536,37.3480155944431,36.2392633908445,33.9973559269856,39.1709898277282,35.7220268462305,33.2588015461735,37.0385703290314,32.9668720642645,37.8301224745401,39.4299640243228,41.1743870289663,38.3882265815187,38.952839657464,43.2903149910521,37.399656688121,33.4758190357174,38.9343172928007,36.9387189660744,31.9851094844911,32.9805350385204,30.6348940188002,37.2400249284417,36.255220837516,32.6012172558129,0.249810577937946,50.0613642073174,24.495300161506,0.191288332068843,4.85301122062934,3.2461496986859|short_description=p1@Rgn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19733 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q64374 | |||
|association_with_transcript=0bp_to_ENSMUST00000023832_5end | |||
|cluster_id=chrX:20126906..20126922,+ | |||
|description=CAGE_peak_1_at_Rgn_5end | |||
|id=chrX:20126906..20126922,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.67e-17!22;UBERON:0007499!2.67e-17!22;UBERON:0006925!2.67e-17!22;UBERON:0009497!2.67e-17!22;UBERON:0000015!2.67e-17!22;UBERON:0002423!2.67e-17!22;UBERON:0006235!2.67e-17!22;UBERON:0008835!2.67e-17!22;UBERON:0003894!2.67e-17!22;UBERON:0004161!2.67e-17!22;UBERON:0008836!2.67e-17!22;UBERON:0005172!3.17e-16!49;UBERON:0005173!3.17e-16!49;UBERON:0002417!3.17e-16!49;UBERON:0000916!3.17e-16!49;UBERON:0009854!5.11e-16!23;UBERON:0009856!5.11e-16!23;UBERON:0002365!8.64e-14!25;UBERON:0002330!8.64e-14!25;UBERON:0009569!2.65e-11!66;UBERON:0005177!1.99e-09!85;UBERON:0001007!3.50e-09!128;UBERON:0001555!3.50e-09!128;UBERON:0007026!3.50e-09!128;UBERON:0005256!6.16e-09!47;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126;UBERON:0004119!1.16e-08!130;UBERON:0000925!1.16e-08!130;UBERON:0006595!1.16e-08!130;UBERON:0005409!1.59e-07!59;UBERON:0003914!3.70e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.97e-20,22;UBERON:0007499,9.97e-20,22;UBERON:0006925,9.97e-20,22;UBERON:0009497,9.97e-20,22;UBERON:0000015,9.97e-20,22;UBERON:0002423,9.97e-20,22;UBERON:0006235,9.97e-20,22;UBERON:0008835,9.97e-20,22;UBERON:0003894,9.97e-20,22;UBERON:0004161,9.97e-20,22;UBERON:0008836,9.97e-20,22;UBERON:0009854,1.86e-18,23;UBERON:0009856,1.86e-18,23;UBERON:0002365,3.09e-16,25;UBERON:0002330,3.09e-16,25;UBERON:0005172,5.88e-12,49;UBERON:0005173,5.88e-12,49;UBERON:0002417,5.88e-12,49;UBERON:0000916,5.88e-12,49;UBERON:0005256,1.82e-11,45;UBERON:0005177,1.66e-07,79;UBERON:0009569,3.64e-07,66;UBERON:0003104,6.04e-07,61;UBERON:0009142,6.04e-07,61;UBERON:0000949,9.25e-07,72 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,4.63978026100879,2.2940928106717,0,0.86152399231815,2.58565479223067,0.570070258369122,0.756090389279792,0,0,0,0,1.73310971850765,3.32469290716985,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,1415.39727763438,1162.07100930655,1341.16243121998,726.450034706494,810.48063875908,620.48344814208,0,0,0,0,0,0,0,0,0,0,845.074893800763,0,7.27366481417641,9.36820764537134,19.485790611977,31.59432312408,15.976599898578,5.40908052824242,12.0639927676488,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,1.0108910337347,0,0,0,0,8.28876498096433,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,0,0,1.18058539048442,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0.658650345873152,0.671032093801859,0,0,1.32167513193519,2.3800550999719,2.13288250535234,4.87697010906921,9.14958975386863,30.2525286935014,24.016828735246,25.1097826468578,0.474529061544512,2.14108641141214,8.79673230800943,5.76973768919337,4.67913809085888,0,1.08069024937347,1.1948476395262,0.379335801906163,5.48392860526698,0,1.4255592949172,0.581857461502877,0.98190147846446,0.316182685621286,0.147610147979602,0.784993639206874,0,2722.91737979546,40.877050900443,76.461449099036,124.123886036439,151.333650555823,222.606518451481,337.888505313944,518.428439686361,158.73038701276,809.132484665276,935.931024493078,962.35649067075,1118.34302044259,1899.39316216228,1733.51720686224,1249.04627680976,0,1.70542270593436,0.488894929326078,0,0.469380496577004,0,2.61848004974615,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,1.57754109708128,0.390438744296638,0,0,0.891194696329576,0.849229592366497,0.809621403349789,0,0,0,0.141940085208269,3.5613120733451,0,0,0,4.61283208694465,3.62788268357701,0.377210159511796,0,4.30409207121498,3.6179961043551,1.45413491791002,2.85197902707777,1.58018378967908,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,2.68302928352189,0.925972636848558,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,3.81868247206045,1.73984796469624,4.06638934253697,6.48032044930808,2.09088296014469,12.6650286972783,22.9269388854195,72.6523875825703,2.6175594198403,0,0,0,0,0,0,0.258319646955462,0,0,17.4473875690893,0.104859344425711,0,0,0,1.41907650703115,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,3.59122386060928,15.0245573063638,27.2279523116489,50.5167721933437,49.2700602646038,38.8931773652827,39.1466608753899,36.9057091030588,43.4639204233732,38.021894983536,37.3480155944431,36.2392633908445,33.9973559269856,39.1709898277282,35.7220268462305,33.2588015461735,37.0385703290314,32.9668720642645,37.8301224745401,39.4299640243228,41.1743870289663,38.3882265815187,38.952839657464,43.2903149910521,37.399656688121,33.4758190357174,38.9343172928007,36.9387189660744,31.9851094844911,32.9805350385204,30.6348940188002,37.2400249284417,36.255220837516,32.6012172558129,0.249810577937946,50.0613642073174,24.495300161506,0.191288332068843,4.85301122062934,3.2461496986859 | |||
|short_description=p1@Rgn | |||
}} |
Latest revision as of 19:22, 1 October 2015
Short description: | p1@Rgn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgn_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000023832_5end |
EntrezGene: | Rgn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 9.97e-20 | 22 |
epithelial sac | 9.97e-20 | 22 |
digestive gland | 9.97e-20 | 22 |
epithelium of foregut-midgut junction | 9.97e-20 | 22 |
anatomical boundary | 9.97e-20 | 22 |
hepatobiliary system | 9.97e-20 | 22 |
foregut-midgut junction | 9.97e-20 | 22 |
hepatic diverticulum | 9.97e-20 | 22 |
liver primordium | 9.97e-20 | 22 |
septum transversum | 9.97e-20 | 22 |
liver bud | 9.97e-20 | 22 |
digestive tract diverticulum | 1.86e-18 | 23 |
sac | 1.86e-18 | 23 |
exocrine gland | 3.09e-16 | 25 |
exocrine system | 3.09e-16 | 25 |
abdomen element | 5.88e-12 | 49 |
abdominal segment element | 5.88e-12 | 49 |
abdominal segment of trunk | 5.88e-12 | 49 |
abdomen | 5.88e-12 | 49 |
trunk mesenchyme | 1.82e-11 | 45 |
trunk region element | 1.66e-07 | 79 |
subdivision of trunk | 3.64e-07 | 66 |
mesenchyme | 6.04e-07 | 61 |
entire embryonic mesenchyme | 6.04e-07 | 61 |
endocrine system | 9.25e-07 | 72 |