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FFCP PHASE1:Mm9::chr11:46624294..46624311,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:46624294..46624311,+
|DHSsupport=NA
|short_description=p1@Timd4
|DPIdataset=NA
|description=CAGE_peak_1_at_Timd4_5end
|association_with_transcript=0bp_to_ENSMUST00000068877,NM_178759,uc007iox.1_5end
|EntrezGene=276891
|EntrezGene=276891
|HGNC=
|HGNC=
|MCL_coexpression_id=63
|TSSclassifier=NA
|UniProt=Q6U7R4
|UniProt=Q6U7R4
|association_with_transcript=0bp_to_ENSMUST00000068877,NM_178759,uc007iox.1_5end
|cluster_id=chr11:46624294..46624311,+
|description=CAGE_peak_1_at_Timd4_5end
|id=chr11:46624294..46624311,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001041!5.89e-14!92;UBERON:0004921!7.96e-14!126;UBERON:0004185!7.96e-14!126;UBERON:0001007!1.00e-13!128;UBERON:0001555!1.00e-13!128;UBERON:0007026!1.00e-13!128;UBERON:0000077!4.55e-13!97;UBERON:0004119!7.74e-13!130;UBERON:0000925!7.74e-13!130;UBERON:0006595!7.74e-13!130;UBERON:0002365!1.29e-12!25;UBERON:0002330!1.29e-12!25;UBERON:0005057!4.35e-12!51;UBERON:0002405!1.93e-11!70;UBERON:0005172!3.10e-11!49;UBERON:0005173!3.10e-11!49;UBERON:0002417!3.10e-11!49;UBERON:0000916!3.10e-11!49;UBERON:0003104!3.72e-11!131;UBERON:0009142!3.72e-11!131;UBERON:0000926!6.34e-11!193;UBERON:0004120!6.34e-11!193;UBERON:0006603!6.34e-11!193;UBERON:0002107!6.53e-11!22;UBERON:0007499!6.53e-11!22;UBERON:0006925!6.53e-11!22;UBERON:0009497!6.53e-11!22;UBERON:0000015!6.53e-11!22;UBERON:0002423!6.53e-11!22;UBERON:0006235!6.53e-11!22;UBERON:0008835!6.53e-11!22;UBERON:0003894!6.53e-11!22;UBERON:0004161!6.53e-11!22;UBERON:0008836!6.53e-11!22;UBERON:0009854!7.06e-11!23;UBERON:0009856!7.06e-11!23;UBERON:0005177!8.30e-10!85;UBERON:0000466!1.11e-09!79;UBERON:0009569!6.63e-09!66;UBERON:0000949!1.26e-08!72;UBERON:0001048!1.57e-08!147;UBERON:0002530!6.98e-08!65;UBERON:0003914!9.58e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.74e-14,25;UBERON:0002330,9.74e-14,25;UBERON:0001041,5.57e-13,80;UBERON:0004921,9.68e-13,114;UBERON:0001007,4.42e-12,116;UBERON:0001555,4.42e-12,116;UBERON:0007026,4.42e-12,116;UBERON:0002107,9.85e-12,22;UBERON:0007499,9.85e-12,22;UBERON:0006925,9.85e-12,22;UBERON:0009497,9.85e-12,22;UBERON:0000015,9.85e-12,22;UBERON:0002423,9.85e-12,22;UBERON:0006235,9.85e-12,22;UBERON:0008835,9.85e-12,22;UBERON:0003894,9.85e-12,22;UBERON:0004161,9.85e-12,22;UBERON:0008836,9.85e-12,22;UBERON:0009854,1.03e-11,23;UBERON:0009856,1.03e-11,23;UBERON:0004119,1.88e-11,118;UBERON:0000925,1.88e-11,118;UBERON:0006595,1.88e-11,118;UBERON:0000949,1.65e-10,72;UBERON:0002530,2.95e-10,65;UBERON:0005177,4.60e-10,79;UBERON:0005172,4.85e-10,49;UBERON:0005173,4.85e-10,49;UBERON:0002417,4.85e-10,49;UBERON:0000916,4.85e-10,49;UBERON:0002368,1.19e-08,60;UBERON:0009569,6.39e-08,66;UBERON:0005256,2.64e-07,45;UBERON:0003929,3.93e-07,55;UBERON:0002100,4.17e-07,90
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,3.66420737997229,6.2767332890846,5.59649502502517,4.73193248037357,3.42786084014347,5.94145512517242,1.78590909317247,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0.579728977403356,18.9293252935905,0.679971333707751,0,11.695975514058,4.03224198387602,14.1848864333069,0,0,0,0,0,0,0,0,0,0,12.7885945285347,1105.14688740613,2.22663208597237,1.21439728736295,3.34912026143355,1.84492397804847,1.3565037649736,2.4693628498498,4.77533047052767,0.247194967734374,26.172483602504,3.5384422077995,2.58826959915855,7.28777010919299,4.363877278217,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,1.01839363850316,3.6078021476927,1.0108910337347,1.26265113531884,0,0,0.180062129805349,0.60281927134286,0.136072998302656,0.2562274405697,0.468508622798644,0.517406741478031,0.431135985865684,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.925602677324269,0.232533944750408,0.804820204198858,0.467061369468678,0.493679549740441,2.79084688934462,2.59420190546738,3.36259971078264,14.7098577245004,3.75777972529041,0.420579897128254,0,0.991256348951394,3.70230793328962,0.426576501070468,0.232236671860439,1.15980715189884,3.22693639397348,3.7804267453628,3.04361001780095,8.54152310780121,4.11747386810027,6.78605063760728,5.57078121715222,5.8489226135736,5.39291645192533,4.53889904736858,3.98282546508734,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.701358198903186,0.379419222745544,0.442830443938806,0.784993639206874,0,32.0168837254121,7.34118465150814,8.84515478009414,16.1900720917095,26.7775360232824,25.0824246142514,24.9533334745791,25.892652370573,20.1047681201044,24.9850886001154,41.6927798929328,74.8003304813692,53.3584421025899,28.5414132080236,25.8332275471554,33.7710464954357,2.77129785249907,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,2.83743259391144,2.21464689648775,2.07291199254733,4.58817281204066,12.0879487306127,2.74833211304872,0,7.61467957346193,11.8023425524569,17.3840150171981,0.642202359951168,0,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,0.35613120733451,1.14020871547503,0.659880491890142,3.98235415019888,0.242780636154981,0.302323556964751,0.377210159511796,2.65771703592696,4.30409207121498,2.84271122485043,1.09060118843252,7.84294232446387,9.48110273807448,6.32511651449993,12.3762651897824,0,0,0,0,0.709360934569094,0,0,0,0,0,1.32317038832977,9.72828892354732,1.13025098687134,2.65376869683886,1.3130957840345,1.47726809770555,4.66369338607761,0.370850604021019,42.888591080261,3.50857675537478,7.77817014952789,22.9809517545723,44.5623182370542,55.8218742623915,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,1.88179466413022,1.52853794622324,2.02296519577231,9.17453358551229,5.49687478166462,2.59229946583586,11.1841076355647,0.56369293868419,0,0,0,0.387479470433193,0,0,1.69265700297135,1.15345278868282,1.20792060413003,1.44015003128933,5.05617793005085,0.608175645870493,1.33524244314275,4.15746633528944,4.11761400035207,7.3512101269068,10.6973950072772,8.71368210330006,8.98601404538514,7.69688747215498,8.77187810690513,12.2796929732088,8.46664206434899,10.4020442941596,6.12172035761071,0,0,0,3.67060228661162,1.12609485270709,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,3.40349403895612,5.44994222832754,2.20612210140017,2.00022055021454,2.26638562962784,1.92551525755089,4.54854981174835,2.5347929989024,2.26351609663291,3.09016974650612,2.43295579138503,3.38869266838118,2.38146845641537,2.20180219295225,1.92909220463705,0.412085900803307,1.32479028120958,0.685738504770831,2.12970967391205,2.14592570952589,1.45346416632329,2.4468438907986,2.36920902096694,1.09756783723664,2.10455769150274,2.30866993537965,1.12228454331548,1.18635018124174,1.87158516513571,0.409231043169689,3.56354734727722,3.66522560864169,0.749431733813838,2.8071793013449,4.51229213501426,0.57386499620653,4.41182838239031,6.02856372613096
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,3.66420737997229,6.2767332890846,5.59649502502517,4.73193248037357,3.42786084014347,5.94145512517242,1.78590909317247,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0.294628585473668,0.284743361598206,0,0,0,0.579728977403356,18.9293252935905,0.679971333707751,0,11.695975514058,4.03224198387602,14.1848864333069,0,0,0,0,0,0,0,0,0,0,12.7885945285347,1105.14688740613,2.22663208597237,1.21439728736295,3.34912026143355,1.84492397804847,1.3565037649736,2.4693628498498,4.77533047052767,0.247194967734374,26.172483602504,3.5384422077995,2.58826959915855,7.28777010919299,4.363877278217,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,1.01839363850316,3.6078021476927,1.0108910337347,1.26265113531884,0,0,0.180062129805349,0.60281927134286,0.136072998302656,0.2562274405697,0.468508622798644,0.517406741478031,0.431135985865684,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.925602677324269,0.232533944750408,0.804820204198858,0.467061369468678,0.493679549740441,2.79084688934462,2.59420190546738,3.36259971078264,14.7098577245004,3.75777972529041,0.420579897128254,0,0.991256348951394,3.70230793328962,0.426576501070468,0.232236671860439,1.15980715189884,3.22693639397348,3.7804267453628,3.04361001780095,8.54152310780121,4.11747386810027,6.78605063760728,5.57078121715222,5.8489226135736,5.39291645192533,4.53889904736858,3.98282546508734,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.701358198903186,0.379419222745544,0.442830443938806,0.784993639206874,0,32.0168837254121,7.34118465150814,8.84515478009414,16.1900720917095,26.7775360232824,25.0824246142514,24.9533334745791,25.892652370573,20.1047681201044,24.9850886001154,41.6927798929328,74.8003304813692,53.3584421025899,28.5414132080236,25.8332275471554,33.7710464954357,2.77129785249907,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,2.83743259391144,2.21464689648775,2.07291199254733,4.58817281204066,12.0879487306127,2.74833211304872,0,7.61467957346193,11.8023425524569,17.3840150171981,0.642202359951168,0,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,0.35613120733451,1.14020871547503,0.659880491890142,3.98235415019888,0.242780636154981,0.302323556964751,0.377210159511796,2.65771703592696,4.30409207121498,2.84271122485043,1.09060118843252,7.84294232446387,9.48110273807448,6.32511651449993,12.3762651897824,0,0,0,0,0.709360934569094,0,0,0,0,0,1.32317038832977,9.72828892354732,1.13025098687134,2.65376869683886,1.3130957840345,1.47726809770555,4.66369338607761,0.370850604021019,42.888591080261,3.50857675537478,7.77817014952789,22.9809517545723,44.5623182370542,55.8218742623915,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,1.88179466413022,1.52853794622324,2.02296519577231,9.17453358551229,5.49687478166462,2.59229946583586,11.1841076355647,0.56369293868419,0,0,0,0.387479470433193,0,0,1.69265700297135,1.15345278868282,1.20792060413003,1.44015003128933,5.05617793005085,0.608175645870493,1.33524244314275,4.15746633528944,4.11761400035207,7.3512101269068,10.6973950072772,8.71368210330006,8.98601404538514,7.69688747215498,8.77187810690513,12.2796929732088,8.46664206434899,10.4020442941596,6.12172035761071,0,0,0,3.67060228661162,1.12609485270709,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,3.40349403895612,5.44994222832754,2.20612210140017,2.00022055021454,2.26638562962784,1.92551525755089,4.54854981174835,2.5347929989024,2.26351609663291,3.09016974650612,2.43295579138503,3.38869266838118,2.38146845641537,2.20180219295225,1.92909220463705,0.412085900803307,1.32479028120958,0.685738504770831,2.12970967391205,2.14592570952589,1.45346416632329,2.4468438907986,2.36920902096694,1.09756783723664,2.10455769150274,2.30866993537965,1.12228454331548,1.18635018124174,1.87158516513571,0.409231043169689,3.56354734727722,3.66522560864169,0.749431733813838,2.8071793013449,4.51229213501426,0.57386499620653,4.41182838239031,6.02856372613096
|short_description=p1@Timd4
}}
}}

Latest revision as of 13:39, 1 October 2015

Short description:p1@Timd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Timd4_5end
Coexpression cluster:MCL_coexpression_mm9:63
Association with transcript: 0bp_to_ENSMUST00000068877, NM_178759, uc007iox.1_5end
EntrezGene:Timd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Timd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.79
accessory axillary lymph node, adult.CNhs10475.1063-29H91105.15
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H126.17
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D314.71
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B232.02
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E116.19
liver, embryo E15.CNhs10520.433-16D726.78
liver, embryo E16.CNhs10523.462-17F525.08
liver, embryo E17.CNhs10510.481-18A324.95
liver, embryo E18.CNhs10579.499-43G425.89
liver, neonate N00.CNhs11117.641-24F420.10
liver, neonate N03.CNhs11123.1345-25G224.99
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H274.80
liver, neonate N10.CNhs11115.751-24B953.36
liver, neonate N20.CNhs11220.823-25A328.54
liver, neonate N25.CNhs11198.1368-26H125.83
liver, neonate N30.CNhs11106.1382-42D133.77
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H217.38
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G242.89
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D122.98
spleen, neonate N20.CNhs11112.824-19H144.56
spleen, neonate N25.CNhs11099.1354-25G355.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A99.17
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F810.70
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C48.99
thymus, neonate N07.CNhs11211.713-19D37.70
thymus, neonate N10.CNhs11194.748-24E48.77
thymus, neonate N20.CNhs11186.820-7A212.28
thymus, neonate N25.CNhs11125.1362-25G78.47
thymus, neonate N30.CNhs11132.1393-42G210.40
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland9.74e-1425
exocrine system9.74e-1425
foregut5.57e-1380
subdivision of digestive tract9.68e-13114
digestive system4.42e-12116
digestive tract4.42e-12116
primitive gut4.42e-12116
liver9.85e-1222
epithelial sac9.85e-1222
digestive gland9.85e-1222
epithelium of foregut-midgut junction9.85e-1222
anatomical boundary9.85e-1222
hepatobiliary system9.85e-1222
foregut-midgut junction9.85e-1222
hepatic diverticulum9.85e-1222
liver primordium9.85e-1222
septum transversum9.85e-1222
liver bud9.85e-1222
digestive tract diverticulum1.03e-1123
sac1.03e-1123
endoderm-derived structure1.88e-11118
endoderm1.88e-11118
presumptive endoderm1.88e-11118
endocrine system1.65e-1072
gland2.95e-1065
trunk region element4.60e-1079
abdomen element4.85e-1049
abdominal segment element4.85e-1049
abdominal segment of trunk4.85e-1049
abdomen4.85e-1049
endocrine gland1.19e-0860
subdivision of trunk6.39e-0866
trunk mesenchyme2.64e-0745
gut epithelium3.93e-0755
trunk4.17e-0790
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