FFCP PHASE1:Mm9::chrX:54646206..54646217,-: Difference between revisions
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{{FFCP|EntrezGene=19655|HGNC=|UniProt=Q9WV02,A2AFI3|association_with_transcript=0bp_to_ENSMUST00000033470,ENSMUST00000098470,ENSMUST00000114726,NM_001166623,NM_011252,NR_029425,uc009thg.2,uc009thh.2,uc009thi.2,uc009thj.2_5end|description=CAGE_peak_2_at_Rbmx_5end|id=chrX:54646206..54646217,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.08e-09!29;UBERON:0001004!9.99e-09!42;UBERON:0000065!1.04e-08!41;UBERON:0002370!2.98e-07!23;UBERON:0000974!2.98e-07!23;UBERON:0004807!2.98e-07!23;UBERON:0005058!2.98e-07!23;UBERON:0003351!2.98e-07!23;UBERON:0009113!2.98e-07!23;UBERON:0003295!2.98e-07!23;UBERON:0009722!2.98e-07!23;UBERON:0005562!2.98e-07!23;UBERON:0007690!2.98e-07!23;UBERON:0003408!3.17e-07!24;UBERON:0003081!4.81e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.94e-09,29;UBERON:0005057,1.94e-09,29;UBERON:0000077,4.56e-09,35;UBERON:0001004,9.41e-09,42;UBERON:0000065,9.83e-09,41;UBERON:0001041,1.96e-07,80;UBERON:0002370,2.78e-07,23;UBERON:0000974,2.78e-07,23;UBERON:0004807,2.78e-07,23;UBERON:0005058,2.78e-07,23;UBERON:0003351,2.78e-07,23;UBERON:0009113,2.78e-07,23;UBERON:0003295,2.78e-07,23;UBERON:0009722,2.78e-07,23;UBERON:0005562,2.78e-07,23;UBERON:0007690,2.78e-07,23;UBERON:0003408,2.96e-07,24;UBERON:0001048,4.46e-07,134|phase1_expression=3.20297694209588,3.48975407639361,5.45999087267443,3.32710632437513,4.50806156951712,2.35030980676646,3.97141489012394,13.0414556675992,14.9236045480767,14.0438715793196,9.93064215707929,7.8974437405383,16.0928686135333,16.9595580692855,5.66286595086627,9.31386229993199,2.79824751251259,16.8772258466657,15.0825876966313,11.0341309467488,5.01755411891312,11.2198774857,9.92559198727954,6.39969691173627,5.04700418347774,2.29692785646008,2.58457197695445,3.44753972297422,4.75058548640935,2.77233142735924,4.43461021310609,5.71527606113668,4.92051830067656,0,7.22129049378186,7.14808975041517,7.14592746918292,12.5559489221072,15.626706890476,16.7527598071615,22.9410280332096,13.6609096991689,15.5363312969969,4.78407908307194,2.83855407414641,2.9367480345869,0.782391344348039,2.18025156380447,0.878744730937887,1.94429899074283,3.07970127575798,1.43752564364972,10.5703041816374,6.5282592781021,7.39406358113421,6.68874533693462,5.15760191889762,2.06268836910977,5.05791152148994,5.81890077199236,3.80298842103708,4.40497891689872,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,7.98410014775278,6.34527910158946,6.09942387919008,1.42825492201902,1.98781686856452,5.87955836231779,6.80502844229478,5.51531271966013,7.70811166995721,4.85211884723713,3.5329502648936,5.80299666012853,4.66586982372289,3.12548022334056,5.862842979029,3.37657566019008,4.43114918552749,5.00868595305235,3.41692033917847,4.28718725398191,3.71058347332602,7.55715601067855,6.08715426273523,9.46466264679525,0.679971333707751,2.69851595818909,3.89865850468601,2.68816132258401,5.47733238513832,6.47635225796619,5.71529210126311,6.00677276667578,2.53518155598025,2.56652954828636,0,0,2.16491041011214,2.02687892380079,2.52762222507392,3.9964357901671,21.4918443427153,4.75014845007439,3.99016251562112,3.65358573974569,1.84492397804847,5.42601505989441,4.23319345688537,5.40366342717605,7.41584903203122,9.83275627055399,7.07688441559899,8.41187619726528,7.72945314611377,10.1823803158397,1.86391761218122,13.7606974595427,8.16842156572475,4.85368404896324,9.4653948359677,7.7987355029143,6.86179226194549,5.69204429738326,3.66000482254901,2.76439574648302,4.69325664519146,4.60287823194595,3.94797284663164,4.38051410282946,6.41587992256993,6.84238338355512,5.55990068554084,5.26104639716185,5.59517904739626,9.42598628177239,7.38254732201932,8.43946979880004,7.41597840749474,8.45550553880009,7.77724313845749,7.76110112217047,7.32931175971664,5.8622884852024,5.63043597324636,4.82230611340665,4.17070873838397,6.268538997399,4.32142486456681,6.76716507182877,7.02213187313235,8.74982884190032,8.24074148247219,6.42089894860056,7.27030785941398,8.4629168886677,8.75955521665278,9.83821158737019,10.181629450567,6.27841650826101,7.24338183778972,7.35621656913168,9.70903114489535,6.07419617092652,5.18840381093477,4.67839959761063,7.68425403518677,7.64976586934119,8.20130799400096,5.14523061896422,3.63460661282178,4.49565963328025,7.67837701926842,7.19933682767359,6.82997545007095,5.64713868945359,5.33707305227689,7.60902504450237,6.64340686162316,3.95277491337626,6.78605063760728,5.57078121715222,7.01870713628832,9.88701349519644,5.40345124686736,5.97423819763102,7.58671603812327,6.39791670614481,12.3978509240388,8.5533557695032,8.92181440971078,6.94344616914154,8.85311519739602,8.11855813887812,9.41992367048249,8.39100714668244,4.15033677922008,9.34332592010127,7.27268281918851,9.89393294493356,8.11440485554012,10.1294407096015,11.7127891819453,7.48009957372108,3.72911021582581,5.76578967694971,7.18841032636773,4.46569137202204,6.86482880852033,6.56705082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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19655 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9WV02,A2AFI3 | |||
|association_with_transcript=0bp_to_ENSMUST00000033470,ENSMUST00000098470,ENSMUST00000114726,NM_001166623,NM_011252,NR_029425,uc009thg.2,uc009thh.2,uc009thi.2,uc009thj.2_5end | |||
|cluster_id=chrX:54646206..54646217,- | |||
|description=CAGE_peak_2_at_Rbmx_5end | |||
|id=chrX:54646206..54646217,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.08e-09!29;UBERON:0001004!9.99e-09!42;UBERON:0000065!1.04e-08!41;UBERON:0002370!2.98e-07!23;UBERON:0000974!2.98e-07!23;UBERON:0004807!2.98e-07!23;UBERON:0005058!2.98e-07!23;UBERON:0003351!2.98e-07!23;UBERON:0009113!2.98e-07!23;UBERON:0003295!2.98e-07!23;UBERON:0009722!2.98e-07!23;UBERON:0005562!2.98e-07!23;UBERON:0007690!2.98e-07!23;UBERON:0003408!3.17e-07!24;UBERON:0003081!4.81e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.94e-09,29;UBERON:0005057,1.94e-09,29;UBERON:0000077,4.56e-09,35;UBERON:0001004,9.41e-09,42;UBERON:0000065,9.83e-09,41;UBERON:0001041,1.96e-07,80;UBERON:0002370,2.78e-07,23;UBERON:0000974,2.78e-07,23;UBERON:0004807,2.78e-07,23;UBERON:0005058,2.78e-07,23;UBERON:0003351,2.78e-07,23;UBERON:0009113,2.78e-07,23;UBERON:0003295,2.78e-07,23;UBERON:0009722,2.78e-07,23;UBERON:0005562,2.78e-07,23;UBERON:0007690,2.78e-07,23;UBERON:0003408,2.96e-07,24;UBERON:0001048,4.46e-07,134 | |||
|phase1_expression=3.20297694209588,3.48975407639361,5.45999087267443,3.32710632437513,4.50806156951712,2.35030980676646,3.97141489012394,13.0414556675992,14.9236045480767,14.0438715793196,9.93064215707929,7.8974437405383,16.0928686135333,16.9595580692855,5.66286595086627,9.31386229993199,2.79824751251259,16.8772258466657,15.0825876966313,11.0341309467488,5.01755411891312,11.2198774857,9.92559198727954,6.39969691173627,5.04700418347774,2.29692785646008,2.58457197695445,3.44753972297422,4.75058548640935,2.77233142735924,4.43461021310609,5.71527606113668,4.92051830067656,0,7.22129049378186,7.14808975041517,7.14592746918292,12.5559489221072,15.626706890476,16.7527598071615,22.9410280332096,13.6609096991689,15.5363312969969,4.78407908307194,2.83855407414641,2.9367480345869,0.782391344348039,2.18025156380447,0.878744730937887,1.94429899074283,3.07970127575798,1.43752564364972,10.5703041816374,6.5282592781021,7.39406358113421,6.68874533693462,5.15760191889762,2.06268836910977,5.05791152148994,5.81890077199236,3.80298842103708,4.40497891689872,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,7.98410014775278,6.34527910158946,6.09942387919008,1.42825492201902,1.98781686856452,5.87955836231779,6.80502844229478,5.51531271966013,7.70811166995721,4.85211884723713,3.5329502648936,5.80299666012853,4.66586982372289,3.12548022334056,5.862842979029,3.37657566019008,4.43114918552749,5.00868595305235,3.41692033917847,4.28718725398191,3.71058347332602,7.55715601067855,6.08715426273523,9.46466264679525,0.679971333707751,2.69851595818909,3.89865850468601,2.68816132258401,5.47733238513832,6.47635225796619,5.71529210126311,6.00677276667578,2.53518155598025,2.56652954828636,0,0,2.16491041011214,2.02687892380079,2.52762222507392,3.9964357901671,21.4918443427153,4.75014845007439,3.99016251562112,3.65358573974569,1.84492397804847,5.42601505989441,4.23319345688537,5.40366342717605,7.41584903203122,9.83275627055399,7.07688441559899,8.41187619726528,7.72945314611377,10.1823803158397,1.86391761218122,13.7606974595427,8.16842156572475,4.85368404896324,9.4653948359677,7.7987355029143,6.86179226194549,5.69204429738326,3.66000482254901,2.76439574648302,4.69325664519146,4.60287823194595,3.94797284663164,4.38051410282946,6.41587992256993,6.84238338355512,5.55990068554084,5.26104639716185,5.59517904739626,9.42598628177239,7.38254732201932,8.43946979880004,7.41597840749474,8.45550553880009,7.77724313845749,7.76110112217047,7.32931175971664,5.8622884852024,5.63043597324636,4.82230611340665,4.17070873838397,6.268538997399,4.32142486456681,6.76716507182877,7.02213187313235,8.74982884190032,8.24074148247219,6.42089894860056,7.27030785941398,8.4629168886677,8.75955521665278,9.83821158737019,10.181629450567,6.27841650826101,7.24338183778972,7.35621656913168,9.70903114489535,6.07419617092652,5.18840381093477,4.67839959761063,7.68425403518677,7.64976586934119,8.20130799400096,5.14523061896422,3.63460661282178,4.49565963328025,7.67837701926842,7.19933682767359,6.82997545007095,5.64713868945359,5.33707305227689,7.60902504450237,6.64340686162316,3.95277491337626,6.78605063760728,5.57078121715222,7.01870713628832,9.88701349519644,5.40345124686736,5.97423819763102,7.58671603812327,6.39791670614481,12.3978509240388,8.5533557695032,8.92181440971078,6.94344616914154,8.85311519739602,8.11855813887812,9.41992367048249,8.39100714668244,4.15033677922008,9.34332592010127,7.27268281918851,9.89393294493356,8.11440485554012,10.1294407096015,11.7127891819453,7.48009957372108,3.72911021582581,5.76578967694971,7.18841032636773,4.46569137202204,6.86482880852033,6.56705082662491,4.30553792452589,3.85954817090694,9.79191907883005,7.39016505904891,9.28900365719548,9.84521497496091,10.3263709246941,11.8929442783689,9.75978927632656,6.82967767502296,9.61574379047765,9.30151696524855,8.29164797018933,9.34020893879707,10.7064688756855,11.4272756279394,6.03165135757089,7.07077388964322,7.37646409528554,9.10591262805617,6.26147300952389,5.62616095642575,3.44263385291018,7.32165688892682,4.10160685241134,2.34263246577983,5.17016154558717,4.06246956519338,2.45078541490634,0.849229592366497,4.85772842009873,2.92255857911312,3.95287777946523,11.8888887076069,6.81312408999689,3.5613120733451,4.88660878060728,8.41347627159931,1.32745138339963,4.37005145078967,6.34879469625977,6.03536255218874,4.13422650033082,6.7635732547664,5.16856586336442,5.08947221268508,6.06045543254026,7.9009189483954,4.21674434299995,11.3449097573006,5.44703369206061,6.12207719706455,4.01011919726539,3.21505552547388,3.90148514013002,2.14042581122485,3.45552943264454,3.65357938937519,12.4376005273766,11.4389318266463,4.6310963591542,5.11147384118588,3.55221738730992,6.45348296731268,4.53614907211919,5.41664969158702,5.53813589596716,5.7481843623258,10.7648654902647,8.2554747185289,9.07453184111587,8.66494902221579,10.2520670790769,10.066239621087,7.13909405974192,8.81694149639045,8.29199842826543,6.68269432610579,6.64305586520384,6.50622294805916,5.0762510186246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| |||
|short_description=p2@Rbmx | |||
}} |
Latest revision as of 22:20, 1 October 2015
Short description: | p2@Rbmx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rbmx_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000033470, ENSMUST00000098470, ENSMUST00000114726, NM_001166623, NM_011252, NR_029425, uc009thg.2, uc009thh.2, uc009thi.2, uc009thj.2_5end |
EntrezGene: | Rbmx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.94e-09 | 29 |
immune organ | 1.94e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 4.56e-09 | 35 |
respiratory system | 9.41e-09 | 42 |
respiratory tract | 9.83e-09 | 41 |
foregut | 1.96e-07 | 80 |
thymus | 2.78e-07 | 23 |
neck | 2.78e-07 | 23 |
respiratory system epithelium | 2.78e-07 | 23 |
hemolymphoid system gland | 2.78e-07 | 23 |
pharyngeal epithelium | 2.78e-07 | 23 |
thymic region | 2.78e-07 | 23 |
pharyngeal gland | 2.78e-07 | 23 |
entire pharyngeal arch endoderm | 2.78e-07 | 23 |
thymus primordium | 2.78e-07 | 23 |
early pharyngeal endoderm | 2.78e-07 | 23 |
gland of gut | 2.96e-07 | 24 |
primordium | 4.46e-07 | 134 |