FFCP PHASE1:Hg19::chr1:31229452..31229490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31229452..31229490,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_at_chr1:31229452..31229490,- | |description=CAGE_peak_at_chr1:31229452..31229490,- | ||
Latest revision as of 07:06, 28 July 2015
| Short description: | p@chr1:31229452..31229490, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:31229452..31229490, - |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:31229452..31229490- |
|---|
0
25
50
75
100
125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 3.03e-99 | 136 |
| hematopoietic lineage restricted progenitor cell | 2.44e-85 | 120 |
| hematopoietic stem cell | 5.65e-83 | 168 |
| nongranular leukocyte | 1.30e-82 | 115 |
| hematopoietic oligopotent progenitor cell | 6.23e-79 | 161 |
| hematopoietic multipotent progenitor cell | 6.23e-79 | 161 |
| hematopoietic cell | 8.56e-77 | 177 |
| myeloid leukocyte | 6.46e-74 | 72 |
| granulocyte monocyte progenitor cell | 1.91e-63 | 67 |
| myeloid lineage restricted progenitor cell | 1.57e-60 | 66 |
Showing 1 to 10 of 46 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.01e-64 | 98 |
| blood island | 2.01e-64 | 98 |
| hemolymphoid system | 3.14e-59 | 108 |
| bone marrow | 3.08e-53 | 76 |
| immune system | 9.12e-51 | 93 |
| bone element | 1.09e-47 | 82 |
| skeletal element | 1.85e-41 | 90 |
| skeletal system | 4.16e-35 | 100 |
| lateral plate mesoderm | 7.37e-21 | 203 |
| connective tissue | 6.63e-20 | 371 |
Showing 1 to 10 of 17 entries
