FFCP PHASE1:Mm9::chr11:70513607..70513672,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:70513607..70513672,-
|short_description=p1@Inca1
|description=CAGE_peak_1_at_Inca1_5end
|association_with_transcript=0bp_to_ENSMUST00000073625,ENSMUST0000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=103844 | |EntrezGene=103844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PKN7,Q5SX65,Q5SX64 | |UniProt=Q6PKN7,Q5SX65,Q5SX64 | ||
|association_with_transcript=0bp_to_ENSMUST00000073625,ENSMUST00000108541,ENSMUST00000108542,ENSMUST00000108543,ENSMUST00000127985,ENSMUST00000152446,NM_001252482,NM_001252483,NM_001252484,NM_001252485,NM_213729,uc007jwg.1,uc007jwh.1,uc007jwi.1,uc007jwj.1_5end | |||
|cluster_id=chr11:70513607..70513672,- | |||
|description=CAGE_peak_1_at_Inca1_5end | |||
|id=chr11:70513607..70513672,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!8.02e-09!25;UBERON:0002330!8.02e-09!25;UBERON:0009854!1.03e-08!23;UBERON:0009856!1.03e-08!23;UBERON:0002107!2.31e-08!22;UBERON:0007499!2.31e-08!22;UBERON:0006925!2.31e-08!22;UBERON:0009497!2.31e-08!22;UBERON:0000015!2.31e-08!22;UBERON:0002423!2.31e-08!22;UBERON:0006235!2.31e-08!22;UBERON:0008835!2.31e-08!22;UBERON:0003894!2.31e-08!22;UBERON:0004161!2.31e-08!22;UBERON:0008836!2.31e-08!22;UBERON:0005256!1.18e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.91e-09,25;UBERON:0002330,8.91e-09,25;UBERON:0009854,1.15e-08,23;UBERON:0009856,1.15e-08,23;UBERON:0002107,2.59e-08,22;UBERON:0007499,2.59e-08,22;UBERON:0006925,2.59e-08,22;UBERON:0009497,2.59e-08,22;UBERON:0000015,2.59e-08,22;UBERON:0002423,2.59e-08,22;UBERON:0006235,2.59e-08,22;UBERON:0008835,2.59e-08,22;UBERON:0003894,2.59e-08,22;UBERON:0004161,2.59e-08,22;UBERON:0008836,2.59e-08,22;UBERON:0005256,5.33e-08,45 | |||
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| |phase1_expression=2.40223270657191,1.39590163055744,2.27499619694768,5.44435580352294,6.01074875935617,2.35030980676646,2.33612640595526,2.45334314538995,1.54867594366833,1.17032263160997,0.856089841127525,0.717949430958028,1.88320802924326,1.57356724354195,0,0.202475267389826,0,2.05050407482854,2.19383093769182,1.69755860719212,9.86502165752409,0.297872853602656,0,1.11994695955385,1.14704640533585,1.14846392823004,0.86152399231815,1.72376986148711,1.90023419456374,1.00812051903972,1.10865255327652,2.54012269383853,2.46025915033828,0,2.02196133825892,0.997407872150954,3.47087905646027,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,5.16176953699867,7.40051597902456,4.77221555620372,5.47673941043627,5.01457859675027,8.34807494390993,4.86074747685709,5.17949760013841,8.62515386189829,3.35565212115473,3.62681071005672,3.6970317905671,1.28629718017973,2.29226751951005,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,0,2.66788438833342,0.899899717281399,0.988866362566974,0,3.89480143673926,10.7581125490035,0.518448061542388,0.675029691658453,0.210324961351382,2.57085885963423,2.20868540951614,0.244981598429908,0.191690942036473,0,4.40463523997555,4.21368215681119,3.5329502648936,0.527545150920775,0.823388792421687,1.04182674111352,2.51264699101243,3.37657566019008,3.81995619442025,1.76777151284201,2.13557521198654,0.559198337475902,0.757261933331841,1.20914496170857,5.79728977403356,32.6961073252927,15.6393406752783,51.8115063972304,73.4247351715866,74.3724632581577,10.9546647702766,1.36344258062446,3.37721805983729,1.7666978725517,2.53518155598025,5.13305909657271,5.09610479413291,7.11066703153331,1.08245520505607,0.253359865475099,1.51657333504435,20.3247305899927,10.0985774622397,8.90652834388949,2.08182392119363,5.48037860961854,5.30415643688935,10.0984169170257,12.2292255421133,11.8126595849895,7.41584903203122,61.5993260478824,0,1.94120219936891,0.883366073841574,3.87900202508178,5.59175283654366,6.73395833126558,5.44561437714983,1.78819938646014,0.239630249011841,0,0.381210681219194,5.09288173976397,5.03250663100489,1.13088916901578,4.51943232499919,4.34716277461562,4.98691306942944,4.86723789203273,3.56437773476107,6.34475550111474,19.7123751578266,3.36706969418358,1.43132487258974,1.60931473103431,1.44049703844279,3.31550599238573,3.81004395247436,2.8185018462667,1.68663104207512,5.69147415625834,1.07783996466421,1.70195472151037,1.58356011747554,1.09597866213787,0,2.089512999133,2.67516777330327,0.796137067273973,0,0.51469581422943,0.568326998791185,1.44988040774851,0.938104239924385,0.36012412292203,2.13070262026689,1.37734962223183,1.54267112887378,1.16266972375204,0,2.56883753207773,2.13927804887525,2.46251196118643,3.89130285820108,3.21639972335731,3.29325172936576,2.28150911892632,10.3042074796422,2.16099685996497,3.30418782983798,1.58670339998127,1.06644125267617,0.696710015581316,2.19074684247559,1.61346819698674,3.11329261382818,2.66315876557583,2.84717436926707,4.28217282282428,6.03204501120647,5.37182474511107,4.28920991662064,3.59527763461689,2.16138049874694,2.38969527905241,1.70701110857774,1.48523066392647,0,2.24016460629846,2.13347735884388,3.57692681440625,4.11037491307672,5.31396532726568,3.45397201251025,6.16985819609003,25.1984733024077,0.83422552858047,1.96558995113203,2.9232074610031,2.23146133527353,5.06472035480075,3.8193877767213,5.4662266115654,32.4270453550071,25.8087728396797,60.3826467414889,42.4240680342094,49.3019523521006,59.6086151955184,56.8689800864462,69.4718670763249,2.40179147216586,1.51593129416388,0.977789858652155,1.18821560042632,1.87752198630802,2.68010011906905,4.28478553594825,5.07347484430277,3.4679731703362,4.4292937929755,2.55127629851979,4.26044618260919,2.59027472798843,5.20736610893442,3.01582567878545,2.71952841909355,3.44234991113325,5.79467167239938,7.06422595946285,6.32943107597897,2.13115428989678,8.33154059774431,1.26203287766503,1.56175497718655,2.80050417052639,2.38968797952552,2.00518806674155,3.67999490025482,1.21443210502468,2.04579100537918,2.37172666767914,5.14114106274891,6.81312408999689,3.5613120733451,4.88660878060728,4.45419332025846,3.98235415019888,1.45668381692989,1.51161778482376,1.69744571780308,2.06711325016541,1.22974059177571,4.65170927702798,4.36240475373007,1.78248689192361,5.37262488490887,3.16255825724996,4.12542172992747,6.46835250932197,1.44048875225048,3.49268446213437,3.64372959553707,2.48276327099183,3.38900753443934,2.79733335023606,3.65357938937519,3.75474732901937,6.56679419677843,3.30792597082443,13.6855589941428,9.84933002845024,4.94565984410878,3.9392873521035,4.10352249362653,3.49777003955821,4.82105785227325,0.683483523191411,2.27025554759545,0.925972636848558,0.188368457004691,0.683471138605126,1.37266903923914,1.35982743995084,1.11961161858926,0.967399816630967,2.86401185404534,2.21435195506795,1.82987520414164,2.37611749807963,0.418176592028937,1.52853794622324,3.10187996685088,7.3561575595549,2.87931536182433,5.4438288782553,4.97071450469541,29.3120328115779,2.69129782879162,2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| ||
|short_description=p1@Inca1 | |||
}} | }} |
Latest revision as of 15:05, 25 September 2015
Short description: | p1@Inca1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Inca1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000073625, ENSMUST00000108541, ENSMUST00000108542, ENSMUST00000108543, ENSMUST00000127985, ENSMUST00000152446, NM_001252482, NM_001252483, NM_001252484, NM_001252485, NM_213729, uc007jwg.1, uc007jwh.1, uc007jwi.1, uc007jwj.1_5end |
EntrezGene: | Inca1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 8.91e-09 | 25 |
exocrine system | 8.91e-09 | 25 |
digestive tract diverticulum | 1.15e-08 | 23 |
sac | 1.15e-08 | 23 |
liver | 2.59e-08 | 22 |
epithelial sac | 2.59e-08 | 22 |
digestive gland | 2.59e-08 | 22 |
epithelium of foregut-midgut junction | 2.59e-08 | 22 |
anatomical boundary | 2.59e-08 | 22 |
hepatobiliary system | 2.59e-08 | 22 |
foregut-midgut junction | 2.59e-08 | 22 |
hepatic diverticulum | 2.59e-08 | 22 |
liver primordium | 2.59e-08 | 22 |
septum transversum | 2.59e-08 | 22 |
liver bud | 2.59e-08 | 22 |
trunk mesenchyme | 5.33e-08 | 45 |