Personal tools

FFCP PHASE1:Mm9::chr11:86014646..86014702,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:86014646..86014702,- |short_description=p1@Brip1 |description=CAGE_peak_1_at_Brip1_5end |association_with_transcript=0bp_to_ENSMUST00000044423,ENSMUST0000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:86014646..86014702,-
|DHSsupport=NA
|short_description=p1@Brip1
|DPIdataset=NA
|description=CAGE_peak_1_at_Brip1_5end
|association_with_transcript=0bp_to_ENSMUST00000044423,ENSMUST00000100673,ENSMUST00000123366,ENSMUST00000149748,NM_178309,uc007ksf.2,uc011ybr.1_5end
|EntrezGene=237911
|EntrezGene=237911
|HGNC=
|HGNC=
|MCL_coexpression_id=49
|TSSclassifier=NA
|UniProt=Q5SXJ3,E9Q432
|UniProt=Q5SXJ3,E9Q432
|association_with_transcript=0bp_to_ENSMUST00000044423,ENSMUST00000100673,ENSMUST00000123366,ENSMUST00000149748,NM_178309,uc007ksf.2,uc011ybr.1_5end
|cluster_id=chr11:86014646..86014702,-
|description=CAGE_peak_1_at_Brip1_5end
|id=chr11:86014646..86014702,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,2.41971369045464,1.50268718983904,1.34303417529512,1.63528848416868,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,11.9919514253639,15.1856450542369,22.3859801001007,1.26184866143295,1.7824876368746,1.69755860719212,3.31668831589172,8.93618560807968,8.8807928307238,3.03985603307473,1.60586496747019,1.72269589234506,1.7230479846363,1.29282739611533,2.28028103347649,3.02436155711917,1.99557459589774,5.08024538767705,7.99584223859941,15.8481681015439,7.51014211353314,6.4831511689812,7.35009682544529,11.3003540298965,13.2827008569046,22.5115209908733,11.1763982725893,11.6117732442936,7.76816564849846,1.76255545165808,1.11514624341466,1.28482726513177,0,1.30815093828268,0.219686182734472,0.388859798148567,0.839918529752175,1.43752564364972,1.8456086666351,0,2.68875039313971,2.05807548828758,1.71920063963254,0,1.21389876515759,0,0,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0.299600110518405,1.15265491596466,2.90330914463737,0.810035629990144,2.3135745748652,0.856952953211411,0,3.30725157880376,2.68367318851062,1.83843757322004,0,0.127687338085188,0,0.791317726381163,0.457438218012048,0,0,0,0,1.47314292736834,1.99320353118744,0.186399445825301,0.681535739998656,7.17929821014462,0.869593466105033,0.860423876981386,0,0.539703191637817,0.649776417447669,0,3.08977724289854,9.54409806437123,2.85764605063156,3.88673531961374,1.83096445709685,2.56652954828636,2.54805239706646,0,4.11332977921307,4.30711771307668,4.04419556011827,2.39786147410026,9.83963957859253,0.29688427812965,6.93941307064543,4.87144765299426,5.99600292865752,4.6724018571313,4.46837087115678,3.89566433121994,0.494389935468748,0.578397427679647,20.3460426948471,7.44127509758082,8.17113618303456,10.1823803158397,1.86391761218122,0,0,3.0654846625031,15.3363359367578,11.3981518888747,13.5965142968179,0,0,1.13088916901578,0,0,0,0,8.55450656342657,7.58882520721567,0.758168275301024,0.631325567659422,13.0120442962704,7.81667155073808,14.7650946440386,13.5634336052144,15.3762488082001,14.3487366719032,10.6819965998091,0.776110112217047,7.76044774558232,10.5899404893979,10.381116325673,6.79506770525482,10.0097009721215,11.8405736617537,10.7006710932131,10.3497818745616,11.937624184325,10.5512641917033,11.6507034752193,8.07790512888457,8.91199027928165,7.92273070428465,10.6535131013345,9.24791889212798,8.33042409591843,7.67362017676346,5.36546802799238,5.02090972178829,5.75959474697182,6.40253109908471,0.891756905004413,1.16959989940266,1.75640092232841,1.20785776884335,0.210289948564127,1.23485534855141,0.991256348951394,6.61126416658861,12.5840067815788,12.3085436086032,15.206360436007,9.4791256572971,9.11749979763968,6.08722003560189,2.37264530772256,3.29397909448022,6.78605063760728,6.16765063327568,5.06906626509712,2.69645822596266,3.24207074812041,2.19055400579804,6.2590407314517,12.4530878744604,18.0332377076929,14.4592442770173,8.33995694820791,5.82127305089644,5.12215950706484,1.03327103585722,2.98297582898612,0.616985819609003,1.1858105083486,16.1839752544611,17.1006325748487,20.4624522270217,19.0688514105193,16.1588697034119,11.2035374783825,12.083237772934,8.2688965655268,8.51140380883053,4.31304619582064,7.44281895337007,6.86482880852033,5.55673531483646,5.74071723270119,2.8946611281802,0.923765950833023,10.9905018826881,24.4447464663039,18.6719594352707,18.7752198630802,15.5780819420889,5.2369600994923,2.14647012643579,10.0886492227962,9.08005227559977,5.74037167166954,0.655453258862952,3.62638461918381,1.44649058581512,0,1.08781136763742,3.93411418415229,3.03530420935206,0,0,6.39346286969034,3.28212205365685,13.8823616543153,10.1514073517126,10.9865932843727,10.5146271099123,11.5855310522845,6.51076020814315,11.7395103485719,7.01414058987149,11.0680577825027,0,4.68402281187286,5.1639025063504,8.95878276444668,4.12425307431339,0,8.98288353773431,7.55808892411878,6.78978287121233,2.06711325016541,5.53383266299069,4.65170927702798,10.1789444253702,11.7644134866958,3.79244109522979,2.10837217149998,1.03135543248187,0,10.0834212657534,2.19909762430683,5.78709994585299,4.61084607469911,3.56737635204141,4.93647061806363,0.913394847343798,5.16277757740163,0.21183207086382,0.661585194164886,2.4732937941222,4.84393280087717,10.5547618624273,8.23669173621642,4.59594519286172,3.20628920292836,0,13.6696704638282,12.7959858137198,18.5194527369712,21.4740040985348,24.0581840789004,14.1842467388044,7.30907248973578,9.93655311497972,6.90999869022119,2.86401185404534,9.80641580101519,15.6555989687673,13.7166782843688,8.15444354456428,8.51613998610093,6.47348862647139,5.86839535649885,2.35580347785627,2.33306951925227,0,5.07323644815771,12.7089064137382,11.4166358415397,16.5283510092441,9.29950729039664,15.5439635451516,10.2100797621806,11.7183946359555,14.0511521530453,10.1465330746923,6.91272015018877,15.1685337901526,5.87903124341476,10.0656738021531,14.2912905275575,20.5880700017604,23.6430812189705,19.351467372715,23.7780138751069,22.8184176882814,20.652044603505,16.9387991029892,14.4237663494834,14.9128354542511,10.6357980985228,0.453460767230423,11.3212836220773,7.35653624197701,5.87596157274275,0.386379188064381,3.75364950902364,1.64836461840539,1.50057865355346,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,8.51056250190249,11.5717213286299,9.73181552798565,9.72426868273176,10.6902712940271,5.1476182366004,7.11189528965169,5.56294654545014,8.02298023979538,7.32821914115013,7.85785829659743,9.61994341068989,9.73871677686777,8.57937042225248,10.3383844120104,6.19181798667996,7.41659686047075,5.98018583437486,8.24171801606613,8.24313952752625,6.17164654293748,8.5188386956482,8.34526664815623,8.43009216467505,10.6343599869324,7.44608549446753,8.78054269789308,7.62902163169744,9.91370031074791,14.0285567914435,7.23673610557462,7.88035859004508,6.54769669071503,8.05671574167023,7.9091710502268,4.74640098082097,7.48581147025307,4.29742108096597,3.25190164517034,7.0589254118245,7.18790290423307
|phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,2.41971369045464,1.50268718983904,1.34303417529512,1.63528848416868,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,11.9919514253639,15.1856450542369,22.3859801001007,1.26184866143295,1.7824876368746,1.69755860719212,3.31668831589172,8.93618560807968,8.8807928307238,3.03985603307473,1.60586496747019,1.72269589234506,1.7230479846363,1.29282739611533,2.28028103347649,3.02436155711917,1.99557459589774,5.08024538767705,7.99584223859941,15.8481681015439,7.51014211353314,6.4831511689812,7.35009682544529,11.3003540298965,13.2827008569046,22.5115209908733,11.1763982725893,11.6117732442936,7.76816564849846,1.76255545165808,1.11514624341466,1.28482726513177,0,1.30815093828268,0.219686182734472,0.388859798148567,0.839918529752175,1.43752564364972,1.8456086666351,0,2.68875039313971,2.05807548828758,1.71920063963254,0,1.21389876515759,0,0,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0.299600110518405,1.15265491596466,2.90330914463737,0.810035629990144,2.3135745748652,0.856952953211411,0,3.30725157880376,2.68367318851062,1.83843757322004,0,0.127687338085188,0,0.791317726381163,0.457438218012048,0,0,0,0,1.47314292736834,1.99320353118744,0.186399445825301,0.681535739998656,7.17929821014462,0.869593466105033,0.860423876981386,0,0.539703191637817,0.649776417447669,0,3.08977724289854,9.54409806437123,2.85764605063156,3.88673531961374,1.83096445709685,2.56652954828636,2.54805239706646,0,4.11332977921307,4.30711771307668,4.04419556011827,2.39786147410026,9.83963957859253,0.29688427812965,6.93941307064543,4.87144765299426,5.99600292865752,4.6724018571313,4.46837087115678,3.89566433121994,0.494389935468748,0.578397427679647,20.3460426948471,7.44127509758082,8.17113618303456,10.1823803158397,1.86391761218122,0,0,3.0654846625031,15.3363359367578,11.3981518888747,13.5965142968179,0,0,1.13088916901578,0,0,0,0,8.55450656342657,7.58882520721567,0.758168275301024,0.631325567659422,13.0120442962704,7.81667155073808,14.7650946440386,13.5634336052144,15.3762488082001,14.3487366719032,10.6819965998091,0.776110112217047,7.76044774558232,10.5899404893979,10.381116325673,6.79506770525482,10.0097009721215,11.8405736617537,10.7006710932131,10.3497818745616,11.937624184325,10.5512641917033,11.6507034752193,8.07790512888457,8.91199027928165,7.92273070428465,10.6535131013345,9.24791889212798,8.33042409591843,7.67362017676346,5.36546802799238,5.02090972178829,5.75959474697182,6.40253109908471,0.891756905004413,1.16959989940266,1.75640092232841,1.20785776884335,0.210289948564127,1.23485534855141,0.991256348951394,6.61126416658861,12.5840067815788,12.3085436086032,15.206360436007,9.4791256572971,9.11749979763968,6.08722003560189,2.37264530772256,3.29397909448022,6.78605063760728,6.16765063327568,5.06906626509712,2.69645822596266,3.24207074812041,2.19055400579804,6.2590407314517,12.4530878744604,18.0332377076929,14.4592442770173,8.33995694820791,5.82127305089644,5.12215950706484,1.03327103585722,2.98297582898612,0.616985819609003,1.1858105083486,16.1839752544611,17.1006325748487,20.4624522270217,19.0688514105193,16.1588697034119,11.2035374783825,12.083237772934,8.2688965655268,8.51140380883053,4.31304619582064,7.44281895337007,6.86482880852033,5.55673531483646,5.74071723270119,2.8946611281802,0.923765950833023,10.9905018826881,24.4447464663039,18.6719594352707,18.7752198630802,15.5780819420889,5.2369600994923,2.14647012643579,10.0886492227962,9.08005227559977,5.74037167166954,0.655453258862952,3.62638461918381,1.44649058581512,0,1.08781136763742,3.93411418415229,3.03530420935206,0,0,6.39346286969034,3.28212205365685,13.8823616543153,10.1514073517126,10.9865932843727,10.5146271099123,11.5855310522845,6.51076020814315,11.7395103485719,7.01414058987149,11.0680577825027,0,4.68402281187286,5.1639025063504,8.95878276444668,4.12425307431339,0,8.98288353773431,7.55808892411878,6.78978287121233,2.06711325016541,5.53383266299069,4.65170927702798,10.1789444253702,11.7644134866958,3.79244109522979,2.10837217149998,1.03135543248187,0,10.0834212657534,2.19909762430683,5.78709994585299,4.61084607469911,3.56737635204141,4.93647061806363,0.913394847343798,5.16277757740163,0.21183207086382,0.661585194164886,2.4732937941222,4.84393280087717,10.5547618624273,8.23669173621642,4.59594519286172,3.20628920292836,0,13.6696704638282,12.7959858137198,18.5194527369712,21.4740040985348,24.0581840789004,14.1842467388044,7.30907248973578,9.93655311497972,6.90999869022119,2.86401185404534,9.80641580101519,15.6555989687673,13.7166782843688,8.15444354456428,8.51613998610093,6.47348862647139,5.86839535649885,2.35580347785627,2.33306951925227,0,5.07323644815771,12.7089064137382,11.4166358415397,16.5283510092441,9.29950729039664,15.5439635451516,10.2100797621806,11.7183946359555,14.0511521530453,10.1465330746923,6.91272015018877,15.1685337901526,5.87903124341476,10.0656738021531,14.2912905275575,20.5880700017604,23.6430812189705,19.351467372715,23.7780138751069,22.8184176882814,20.652044603505,16.9387991029892,14.4237663494834,14.9128354542511,10.6357980985228,0.453460767230423,11.3212836220773,7.35653624197701,5.87596157274275,0.386379188064381,3.75364950902364,1.64836461840539,1.50057865355346,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,8.51056250190249,11.5717213286299,9.73181552798565,9.72426868273176,10.6902712940271,5.1476182366004,7.11189528965169,5.56294654545014,8.02298023979538,7.32821914115013,7.85785829659743,9.61994341068989,9.73871677686777,8.57937042225248,10.3383844120104,6.19181798667996,7.41659686047075,5.98018583437486,8.24171801606613,8.24313952752625,6.17164654293748,8.5188386956482,8.34526664815623,8.43009216467505,10.6343599869324,7.44608549446753,8.78054269789308,7.62902163169744,9.91370031074791,14.0285567914435,7.23673610557462,7.88035859004508,6.54769669071503,8.05671574167023,7.9091710502268,4.74640098082097,7.48581147025307,4.29742108096597,3.25190164517034,7.0589254118245,7.18790290423307
|short_description=p1@Brip1
}}
}}

Latest revision as of 21:23, 25 September 2015

Short description:p1@Brip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Brip1_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 0bp_to_ENSMUST00000044423, ENSMUST00000100673, ENSMUST00000123366, ENSMUST00000149748, NM_178309, uc007ksf.2, uc011ybr.1_5end
EntrezGene:Brip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Brip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.19
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F97.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C613.01
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C914.77
eyeball, embryo E17.CNhs11023.1261-18D413.56
eyeball, neonate N00.CNhs11207.633-15C615.38
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H210.59
forelimb, embryo E13.CNhs10589.384-1E210.38
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I512.58
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D815.21
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F812.45
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I214.46
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F816.18
liver, embryo E13.CNhs10524.378-3H617.10
liver, embryo E14.CNhs10594.409-16E120.46
liver, embryo E15.CNhs10520.433-16D719.07
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F48.27
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F824.44
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B618.78
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H310.55
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C112.80
spleen, embryo E18.CNhs11011.1271-21F218.52
spleen, neonate N10.CNhs11116.752-24D121.47
spleen, neonate N20.CNhs11112.824-19H124.06
spleen, neonate N25.CNhs11099.1354-25G314.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G815.66
stomach, embryo E16.CNhs11022.459-17D413.72
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C511.42
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I59.30
testis, embryo E18.CNhs11027.503-18G515.54
testis, neonate N00.CNhs11189.1300-22B710.21
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D914.05
testis, neonate N20.CNhs11110.839-18H310.15
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B515.17
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I210.07
thymus, embryo E16.CNhs11002.456-26C514.29
thymus, embryo E17.CNhs10581.478-18C120.59
thymus, embryo E18.CNhs10595.1273-19G423.64
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C723.78
thymus, neonate N06.CNhs11197.681-26C422.82
thymus, neonate N07.CNhs11211.713-19D320.65
thymus, neonate N10.CNhs11194.748-24E416.94
thymus, neonate N20.CNhs11186.820-7A214.42
thymus, neonate N25.CNhs11125.1362-25G714.91
thymus, neonate N30.CNhs11132.1393-42G210.64
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I88.51
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.06
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:86014646..86014702,-&oldid=4214787"