FFCP PHASE1:Mm9::chr11:98219716..98219771,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:98219716..98219771,+
|short_description=p1@Stard3
|description=CAGE_peak_1_at_Stard3_5end
|association_with_transcript=0bp_to_ENSMUST00000152559,ENSMUST00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59045 | |EntrezGene=59045 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=718 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000152559,ENSMUST00000154960,ENSMUST00000155063_5end | |||
|cluster_id=chr11:98219716..98219771,+ | |||
|description=CAGE_peak_1_at_Stard3_5end | |||
|id=chr11:98219716..98219771,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.29e-12!118;CL:0000548!1.84e-11!115;CL:0000004!1.84e-11!115;CL:0000255!1.84e-11!115;CL:0000063!2.18e-11!66;CL:0000144!3.34e-11!121;CL:0000012!3.34e-11!121;CL:0000066!5.45e-09!25;CL:0000738!8.04e-08!17;CL:0002087!8.04e-08!17;CL:0000223!1.27e-07!20;CL:0002321!2.27e-07!70;CL:0000220!2.27e-07!70;CL:0002076!5.58e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.45e-09,25;CL:0000738,8.04e-08,17;CL:0002087,8.04e-08,17;CL:0000223,1.27e-07,20;CL:0002321,2.27e-07,70;CL:0002076,5.58e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.19e-11!130;UBERON:0000925!3.19e-11!130;UBERON:0006595!3.19e-11!130;UBERON:0001007!7.98e-11!128;UBERON:0001555!7.98e-11!128;UBERON:0007026!7.98e-11!128;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0001004!1.20e-09!42;UBERON:0000065!2.53e-09!41;UBERON:0005911!3.76e-09!69;UBERON:0000490!5.21e-08!66;UBERON:0000344!6.80e-08!15;UBERON:0001242!4.52e-07!13;UBERON:0000060!4.52e-07!13;UBERON:0001262!4.52e-07!13;UBERON:0004786!4.52e-07!13;UBERON:0000064!6.12e-07!99;UBERON:0000072!6.69e-07!27;UBERON:0003408!8.93e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.71e-13,118;UBERON:0000925,4.71e-13,118;UBERON:0006595,4.71e-13,118;UBERON:0001007,1.24e-12,116;UBERON:0001555,1.24e-12,116;UBERON:0007026,1.24e-12,116;UBERON:0004921,7.39e-12,114;UBERON:0011216,5.81e-11,194;UBERON:0001004,1.20e-09,42;UBERON:0000065,2.53e-09,41;UBERON:0005911,3.76e-09,69;UBERON:0000160,2.31e-08,31;UBERON:0000490,5.21e-08,66;UBERON:0000344,6.80e-08,15;UBERON:0001242,4.52e-07,13;UBERON:0001262,4.52e-07,13;UBERON:0004786,4.52e-07,13;UBERON:0000072,6.69e-07,27;UBERON:0003408,8.93e-07,24 | |||
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| ||
|short_description=p1@Stard3 | |||
}} | }} |
Latest revision as of 02:57, 26 September 2015
Short description: | p1@Stard3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stard3_5end |
Coexpression cluster: | MCL_coexpression_mm9:718 |
Association with transcript: | 0bp_to_ENSMUST00000152559, ENSMUST00000154960, ENSMUST00000155063_5end |
EntrezGene: | Stard3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.45e-09 | 25 |
leukocyte | 8.04e-08 | 17 |
nongranular leukocyte | 8.04e-08 | 17 |
endodermal cell | 1.27e-07 | 20 |
embryonic cell | 2.27e-07 | 70 |
endo-epithelial cell | 5.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.71e-13 | 118 |
endoderm | 4.71e-13 | 118 |
presumptive endoderm | 4.71e-13 | 118 |
digestive system | 1.24e-12 | 116 |
digestive tract | 1.24e-12 | 116 |
primitive gut | 1.24e-12 | 116 |
subdivision of digestive tract | 7.39e-12 | 114 |
organ system subdivision | 5.81e-11 | 194 |
respiratory system | 1.20e-09 | 42 |
respiratory tract | 2.53e-09 | 41 |
endo-epithelium | 3.76e-09 | 69 |
intestine | 2.31e-08 | 31 |
unilaminar epithelium | 5.21e-08 | 66 |
mucosa | 6.80e-08 | 15 |
intestinal mucosa | 4.52e-07 | 13 |
wall of intestine | 4.52e-07 | 13 |
gastrointestinal system mucosa | 4.52e-07 | 13 |
segment of respiratory tract | 6.69e-07 | 27 |
gland of gut | 8.93e-07 | 24 |