FFCP PHASE1:Mm9::chr11:98822093..98822104,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:98822093..98822104,+
|short_description=p16@Rara
|description=CAGE_peak_16_at_Rara_5end
|association_with_transcript=308bp_to_NM_001176528,uc007lhz.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19401 | |EntrezGene=19401 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P11416 | |UniProt=P11416 | ||
|association_with_transcript=308bp_to_NM_001176528,uc007lhz.2_5end | |||
|cluster_id=chr11:98822093..98822104,+ | |||
|description=CAGE_peak_16_at_Rara_5end | |||
|id=chr11:98822093..98822104,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.76e-17,3;DOID:4045,5.76e-17,3;DOID:0050686,9.55e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.27e-14!59;UBERON:0004923!1.38e-09!24;UBERON:0000344!2.08e-09!15;UBERON:0001242!1.73e-08!13;UBERON:0000060!1.73e-08!13;UBERON:0001262!1.73e-08!13;UBERON:0004786!1.73e-08!13;UBERON:0000160!3.33e-08!43;UBERON:0000945!1.71e-07!16;UBERON:0010039!1.71e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-15,31;UBERON:0001242,6.81e-10,13;UBERON:0001262,6.81e-10,13;UBERON:0004786,6.81e-10,13;UBERON:0005409,1.45e-09,47;UBERON:0000344,1.48e-08,15;UBERON:0000331,8.07e-08,3;UBERON:0002116,8.07e-08,3;UBERON:0001204,8.07e-08,3;UBERON:0001168,8.07e-08,3 | |||
|phase1_expression=0,0,0.454999239389536,1.51232105653415,1.50268718983904,0.839396359559449,0.467225281191051,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,1.29228598847722,0.861884930743556,2.09025761402011,1.51218077855958,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,5.4409111995798,2.3440060335714,4.71171369576418,8.2352408324342,8.19654581950135,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0,4.29544417878937,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0,3.32170343081158,0.329397909448022,0.251335208800269,0.596869416123452,0,0.898819408654221,1.08069024937347,1.1948476395262,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.683483523191411,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.247960367176008,0.523511883968059,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,1.51232105653415,1.50268718983904,0.839396359559449,0.467225281191051,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,1.29228598847722,0.861884930743556,2.09025761402011,1.51218077855958,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,5.4409111995798,2.3440060335714,4.71171369576418,8.2352408324342,8.19654581950135,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0,4.29544417878937,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0,3.32170343081158,0.329397909448022,0.251335208800269,0.596869416123452,0,0.898819408654221,1.08069024937347,1.1948476395262,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.683483523191411,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.247960367176008,0.523511883968059,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p16@Rara | |||
}} | }} |
Latest revision as of 03:38, 26 September 2015
Short description: | p16@Rara |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Rara_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 308bp_to_NM_001176528, uc007lhz.2_5end |
EntrezGene: | Rara |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.49e-15 | 31 |
intestinal mucosa | 6.81e-10 | 13 |
wall of intestine | 6.81e-10 | 13 |
gastrointestinal system mucosa | 6.81e-10 | 13 |
gastrointestinal system | 1.45e-09 | 47 |
mucosa | 1.48e-08 | 15 |
ileal mucosa | 8.07e-08 | 3 |
ileum | 8.07e-08 | 3 |
mucosa of small intestine | 8.07e-08 | 3 |
wall of small intestine | 8.07e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.76e-17 | 3 |
muscle cancer | 5.76e-17 | 3 |
organ system cancer | 9.55e-09 | 6 |