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FFCP PHASE1:Mm9::chr12:110842125..110842130,+: Difference between revisions

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(Created page with "{{FFCP |id=chr12:110842125..110842130,+ |short_description=p1@Rian |description=CAGE_peak_1_at_Rian_5end |association_with_transcript=-24bp_to_ENSMUST00000165010,NR_028261...")
 
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{{FFCP
{{FFCP
|id=chr12:110842125..110842130,+
|DHSsupport=NA
|short_description=p1@Rian
|DPIdataset=NA
|description=CAGE_peak_1_at_Rian_5end
|association_with_transcript=-24bp_to_ENSMUST00000165010,NR_028261,uc007pbc.2,uc011ysp.1_5end
|EntrezGene=75745
|EntrezGene=75745
|HGNC=
|HGNC=
|MCL_coexpression_id=220
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-24bp_to_ENSMUST00000165010,NR_028261,uc007pbc.2,uc011ysp.1_5end
|cluster_id=chr12:110842125..110842130,+
|description=CAGE_peak_1_at_Rian_5end
|id=chr12:110842125..110842130,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.23e-11!71;UBERON:0003075!2.23e-11!71;UBERON:0007284!2.23e-11!71;UBERON:0001049!4.05e-10!52;UBERON:0005068!4.05e-10!52;UBERON:0006241!4.05e-10!52;UBERON:0007135!4.05e-10!52;UBERON:0000468!2.99e-09!333;UBERON:0003056!5.02e-09!49;UBERON:0003080!5.56e-09!40;UBERON:0000955!5.87e-09!50;UBERON:0006238!5.87e-09!50;UBERON:0002616!8.05e-09!49;UBERON:0002780!1.35e-08!39;UBERON:0001890!1.35e-08!39;UBERON:0006240!1.35e-08!39;UBERON:0004121!1.84e-08!102;UBERON:0000924!1.84e-08!102;UBERON:0006601!1.84e-08!102;UBERON:0000033!3.96e-08!63;UBERON:0001017!1.22e-07!73;UBERON:0005743!1.22e-07!73;UBERON:0000073!3.93e-07!75;UBERON:0001016!3.93e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.35e-10,54;UBERON:0001049,5.97e-10,52;UBERON:0005068,5.97e-10,52;UBERON:0006241,5.97e-10,52;UBERON:0007135,5.97e-10,52;UBERON:0002346,8.22e-09,64;UBERON:0003075,8.22e-09,64;UBERON:0007284,8.22e-09,64;UBERON:0003080,9.55e-09,40;UBERON:0003056,2.24e-08,49;UBERON:0002780,2.48e-08,39;UBERON:0001890,2.48e-08,39;UBERON:0006240,2.48e-08,39;UBERON:0000955,2.54e-08,47;UBERON:0006238,2.54e-08,47;UBERON:0002616,3.59e-08,46;UBERON:0010371,2.91e-07,73
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0,3.23706337375356,5.81890077199236,3.80298842103708,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,0.420649922702764,4.85606673486466,3.3130281142742,1.71487118900936,1.72521847832825,2.75765635983006,2.20231761998777,3.70293280447044,2.61131106535614,3.42904348098504,2.19570344645783,2.6045668527838,2.23346399201105,3.93933827022176,6.72312290217964,8.83885756421003,5.97961059356232,5.03278503728312,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,5.03107447621794,10.3518262626128,3.92046345335299,11.0027527603414,3.52766121407114,1.75933227861546,3.21353458054686,0.289198713839823,0,12.4560474459505,3.09178125844551,0.484875253135222,0,3.22058876712702,2.51336048176146,0,0,0,0,7.63932260964596,8.23501085073528,2.76439574648302,4.17178368461463,5.11430914660661,4.57133698031032,4.70499662896497,2.34230536855727,0,0.252722758433675,0.420883711772948,1.17108398666433,1.60931473103431,0.540186389416048,7.68594570962147,1.90502197623718,4.74020765053944,1.21812241927647,2.84573707812917,0,3.40390944302075,3.34307135911503,3.28793598641362,13.0682207136031,8.00979983000983,11.1122353660289,3.18454826909589,0,0,0,0.828503090142008,1.64168241986767,2.52086886045421,0.23674473558521,2.16440654922144,1.85120535464854,3.95307706075693,0.804820204198858,0.583826711835847,1.48103864922132,2.13417703302824,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,4.41608891984667,2.77842453424068,0,0,4.90562976231038,8.12828351511535,2.70621668776396,2.21851877085677,2.66853652613844,1.90225626112559,0,1.15289268306808,1.00534083520108,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,2.28497025219458,0,0.610953983535943,1.16371492300575,0.49095073923223,0.316182685621286,0,0,0,0,1.50160595144485,2.16214894624523,3.37293168577281,1.21716072833102,4.82354319504834,2.29163266603278,1.15078454980324,0.324270453550071,1.64736847912849,64.6956929373095,2.23284568601102,2.80833905803104,0.252578877947112,0,0,0,1.32643988239339,1.79261474086228,5.7713329163564,5.63256595892405,2.68010011906905,5.2369600994923,3.90267295715598,1.10344600874334,0.8858587585951,0.478364305972461,0.983179888294428,1.55416483679306,0,0,0,0,0.275936746304732,2.24770825982909,2.46144541843627,1.14754461763673,2.27223834483936,0.631016438832513,0,1.29254038639679,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,2.89189184779626,0.283880170416537,5.69809931735217,1.95464351224291,0.164970122972535,0,10.4395673546642,5.74414758233027,5.84675747243284,2.36241514304618,3.68922177532713,1.80899805217755,5.08947221268508,6.77345018930971,1.8962205476149,0,0,24.8520912200265,3.24109969256358,8.92574918101006,6.64444808597936,6.38424841112185,11.7723419617367,16.6194510808142,7.91608867697958,0.938686832254841,0.847328283455281,0,0.49465875882444,3.06782410722221,2.17126529741361,1.55184047204077,1.96969079694074,1.1659233465194,2.96680483216816,0,1.44470807574256,0.925972636848558,0,0,0.228778173206523,0,0,0,0.954670618015114,1.26534397432454,2.23651413839534,5.50827238191186,4.80903080833278,3.27543845619266,4.98998081623837,2.0663363931334,0.26175594198403,0.259229946583586,0.621339313086926,0,1.94371509857172,0.992750942742586,2.52786544847262,2.0665571756437,10.4752797804282,3.40335992072686,1.95306577265925,0.419437377702843,0,0.288030006257865,0,2.43270258348197,2.2596410576262,0.51968329191118,0,0.596044064343795,0.480781798079875,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0.665957860122194,0,0,0.386379188064381,0,0.36630324853453,0,0,6.21227026878773,6.90487854760765,6.30185064783336,6.35856774671644,4.11049511862385,7.55393897389701,4.72515750162264,9.90706647093285,5.43770890781046,7.24864436452548,1.66059756134683,3.19219898720825,3.92687293234509,9.23805524859517,1.88651846365184,0.551530525350042,15.7795176739147,16.8948746935893,14.4413644316317,11.3713745293709,13.9413614939632,12.6379648728671,12.1733959710847,9.02754648908657,8.61532034334199,9.52587382566147,10.1978206831473,12.3461901096771,11.9504911232959,13.689499572499,19.2006781335833,22.8943789945545,15.2599161566285,11.1916740806893,10.822578747763,12.3537327521848,17.3781574229134,15.5211129748327,15.75327720612,19.0788372363631,15.4225523561426,14.4801589092078,14.3230865109391,11.4653262477615,4.24394544158511,12.4905288968973,14.0358965067245,3.22306581072447,4.59091996965224,4.85301122062934,9.97031693167812
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0,3.23706337375356,5.81890077199236,3.80298842103708,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,0.420649922702764,4.85606673486466,3.3130281142742,1.71487118900936,1.72521847832825,2.75765635983006,2.20231761998777,3.70293280447044,2.61131106535614,3.42904348098504,2.19570344645783,2.6045668527838,2.23346399201105,3.93933827022176,6.72312290217964,8.83885756421003,5.97961059356232,5.03278503728312,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,5.03107447621794,10.3518262626128,3.92046345335299,11.0027527603414,3.52766121407114,1.75933227861546,3.21353458054686,0.289198713839823,0,12.4560474459505,3.09178125844551,0.484875253135222,0,3.22058876712702,2.51336048176146,0,0,0,0,7.63932260964596,8.23501085073528,2.76439574648302,4.17178368461463,5.11430914660661,4.57133698031032,4.70499662896497,2.34230536855727,0,0.252722758433675,0.420883711772948,1.17108398666433,1.60931473103431,0.540186389416048,7.68594570962147,1.90502197623718,4.74020765053944,1.21812241927647,2.84573707812917,0,3.40390944302075,3.34307135911503,3.28793598641362,13.0682207136031,8.00979983000983,11.1122353660289,3.18454826909589,0,0,0,0.828503090142008,1.64168241986767,2.52086886045421,0.23674473558521,2.16440654922144,1.85120535464854,3.95307706075693,0.804820204198858,0.583826711835847,1.48103864922132,2.13417703302824,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,4.41608891984667,2.77842453424068,0,0,4.90562976231038,8.12828351511535,2.70621668776396,2.21851877085677,2.66853652613844,1.90225626112559,0,1.15289268306808,1.00534083520108,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,2.28497025219458,0,0.610953983535943,1.16371492300575,0.49095073923223,0.316182685621286,0,0,0,0,1.50160595144485,2.16214894624523,3.37293168577281,1.21716072833102,4.82354319504834,2.29163266603278,1.15078454980324,0.324270453550071,1.64736847912849,64.6956929373095,2.23284568601102,2.80833905803104,0.252578877947112,0,0,0,1.32643988239339,1.79261474086228,5.7713329163564,5.63256595892405,2.68010011906905,5.2369600994923,3.90267295715598,1.10344600874334,0.8858587585951,0.478364305972461,0.983179888294428,1.55416483679306,0,0,0,0,0.275936746304732,2.24770825982909,2.46144541843627,1.14754461763673,2.27223834483936,0.631016438832513,0,1.29254038639679,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,2.89189184779626,0.283880170416537,5.69809931735217,1.95464351224291,0.164970122972535,0,10.4395673546642,5.74414758233027,5.84675747243284,2.36241514304618,3.68922177532713,1.80899805217755,5.08947221268508,6.77345018930971,1.8962205476149,0,0,24.8520912200265,3.24109969256358,8.92574918101006,6.64444808597936,6.38424841112185,11.7723419617367,16.6194510808142,7.91608867697958,0.938686832254841,0.847328283455281,0,0.49465875882444,3.06782410722221,2.17126529741361,1.55184047204077,1.96969079694074,1.1659233465194,2.96680483216816,0,1.44470807574256,0.925972636848558,0,0,0.228778173206523,0,0,0,0.954670618015114,1.26534397432454,2.23651413839534,5.50827238191186,4.80903080833278,3.27543845619266,4.98998081623837,2.0663363931334,0.26175594198403,0.259229946583586,0.621339313086926,0,1.94371509857172,0.992750942742586,2.52786544847262,2.0665571756437,10.4752797804282,3.40335992072686,1.95306577265925,0.419437377702843,0,0.288030006257865,0,2.43270258348197,2.2596410576262,0.51968329191118,0,0.596044064343795,0.480781798079875,0.295379054349154,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0.665957860122194,0,0,0.386379188064381,0,0.36630324853453,0,0,6.21227026878773,6.90487854760765,6.30185064783336,6.35856774671644,4.11049511862385,7.55393897389701,4.72515750162264,9.90706647093285,5.43770890781046,7.24864436452548,1.66059756134683,3.19219898720825,3.92687293234509,9.23805524859517,1.88651846365184,0.551530525350042,15.7795176739147,16.8948746935893,14.4413644316317,11.3713745293709,13.9413614939632,12.6379648728671,12.1733959710847,9.02754648908657,8.61532034334199,9.52587382566147,10.1978206831473,12.3461901096771,11.9504911232959,13.689499572499,19.2006781335833,22.8943789945545,15.2599161566285,11.1916740806893,10.822578747763,12.3537327521848,17.3781574229134,15.5211129748327,15.75327720612,19.0788372363631,15.4225523561426,14.4801589092078,14.3230865109391,11.4653262477615,4.24394544158511,12.4905288968973,14.0358965067245,3.22306581072447,4.59091996965224,4.85301122062934,9.97031693167812
|short_description=p1@Rian
}}
}}

Latest revision as of 07:46, 26 September 2015

Short description:p1@Rian
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rian_5end
Coexpression cluster:MCL_coexpression_mm9:220
Association with transcript: -24bp_to_ENSMUST00000165010, NR_028261, uc007pbc.2, uc011ysp.1_5end
EntrezGene:Rian
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rian

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B511.11
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A864.70
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F611.77
pituitary gland, embryo E17.CNhs11039.1265-44F516.62
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.35e-1054
neural tube5.97e-1052
neural rod5.97e-1052
future spinal cord5.97e-1052
neural keel5.97e-1052
neurectoderm8.22e-0964
neural plate8.22e-0964
presumptive neural plate8.22e-0964
anterior neural tube9.55e-0940
pre-chordal neural plate2.24e-0849
regional part of forebrain2.48e-0839
forebrain2.48e-0839
future forebrain2.48e-0839
brain2.54e-0847
future brain2.54e-0847
regional part of brain3.59e-0846
ecto-epithelium2.91e-0773
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