FFCP PHASE1:Mm9::chr12:112659674..112659696,+: Difference between revisions
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|id=chr12:112659674..112659696,+
|short_description=p3@1200009I06Rik
|description=CAGE_peak_3_at_1200009I06Rik_5end
|association_with_transcript=-13bp_to_uc011yuw.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74190 | |EntrezGene=74190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_uc011yuw.1_5end | |||
|cluster_id=chr12:112659674..112659696,+ | |||
|description=CAGE_peak_3_at_1200009I06Rik_5end | |||
|id=chr12:112659674..112659696,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.43e-08!9;CL:0002251!2.43e-08!9;CL:0000239!2.44e-08!6;CL:0000677!2.44e-08!6;CL:0000212!2.44e-08!6;CL:0000584!2.44e-08!6;CL:0000075!6.02e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.27e-16,6;CL:0000677,2.27e-16,6;CL:0000584,2.27e-16,6;CL:0000075,6.17e-14,7;CL:0002563,1.10e-10,9;CL:0002251,1.10e-10,9;CL:0000682,8.23e-09,3;CL:0000764,2.91e-08,3;CL:0000765,2.91e-08,3;CL:0000038,2.91e-08,3;CL:0000547,2.91e-08,3;CL:0000066,1.92e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.91e-08,3;DOID:0060083,2.91e-08,3;DOID:1240,2.91e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.16e-15!43;UBERON:0000344!7.77e-15!15;UBERON:0001242!8.24e-13!13;UBERON:0000060!8.24e-13!13;UBERON:0001262!8.24e-13!13;UBERON:0004786!8.24e-13!13;UBERON:0004923!2.05e-11!24;UBERON:0005409!1.05e-10!59;UBERON:0003350!2.43e-08!9;UBERON:0004808!2.43e-08!9;UBERON:0001277!2.43e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.69e-39,31;UBERON:0000344,4.51e-24,15;UBERON:0005409,5.74e-24,47;UBERON:0001242,8.81e-20,13;UBERON:0001262,8.81e-20,13;UBERON:0004786,8.81e-20,13;UBERON:0004923,1.80e-16,24;UBERON:0002108,3.12e-11,4;UBERON:0003350,1.10e-10,9;UBERON:0004808,1.10e-10,9;UBERON:0001277,1.10e-10,9;UBERON:0004119,3.24e-09,118;UBERON:0000925,3.24e-09,118;UBERON:0006595,3.24e-09,118;UBERON:0000331,9.89e-09,3;UBERON:0002116,9.89e-09,3;UBERON:0001204,9.89e-09,3;UBERON:0001168,9.89e-09,3;UBERON:0000485,1.29e-08,11;UBERON:0001007,1.54e-08,116;UBERON:0001555,1.54e-08,116;UBERON:0007026,1.54e-08,116;UBERON:0004921,5.38e-07,114 | |||
|phase1_expression=0,47.1116800313137,18.1999695755814,80.15301599631,96.672875879645,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,2.06468352960453,18.3754228516806,6.03066794622705,11.2045040996662,12.9215925230334,18.146169342715,3.99114919179548,1.27006134691926,4.92051830067656,15.8481681015439,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,23.5020490791904,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0,71.0400383415166,28.8251117663263,0.213288250535234,0,0,0,0.889512175379481,3.61428689613862,18.9811624617805,13.0112174231969,7.03738584640755,4.77495532898762,6.23885078781184,17.9763881730844,12.3198688428576,15.732160587095,0,0,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.69465656691056,0,0,0,0,0,0,17.488850197791,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.347652977834566,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.77468420592983,0,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,47.1116800313137,18.1999695755814,80.15301599631,96.672875879645,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,2.06468352960453,18.3754228516806,6.03066794622705,11.2045040996662,12.9215925230334,18.146169342715,3.99114919179548,1.27006134691926,4.92051830067656,15.8481681015439,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,23.5020490791904,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0,71.0400383415166,28.8251117663263,0.213288250535234,0,0,0,0.889512175379481,3.61428689613862,18.9811624617805,13.0112174231969,7.03738584640755,4.77495532898762,6.23885078781184,17.9763881730844,12.3198688428576,15.732160587095,0,0,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.69465656691056,0,0,0,0,0,0,17.488850197791,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.347652977834566,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.77468420592983,0,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p3@1200009I06Rik | |||
}} | }} |
Latest revision as of 08:26, 26 September 2015
Short description: | p3@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1200009I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -13bp_to_uc011yuw.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.27e-16 | 6 |
gut absorptive cell | 2.27e-16 | 6 |
enterocyte | 2.27e-16 | 6 |
columnar/cuboidal epithelial cell | 6.17e-14 | 7 |
intestinal epithelial cell | 1.10e-10 | 9 |
epithelial cell of alimentary canal | 1.10e-10 | 9 |
M cell of gut | 8.23e-09 | 3 |
erythroid lineage cell | 2.91e-08 | 3 |
erythroblast | 2.91e-08 | 3 |
erythroid progenitor cell | 2.91e-08 | 3 |
proerythroblast | 2.91e-08 | 3 |
epithelial cell | 1.92e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.69e-39 | 31 |
mucosa | 4.51e-24 | 15 |
gastrointestinal system | 5.74e-24 | 47 |
intestinal mucosa | 8.81e-20 | 13 |
wall of intestine | 8.81e-20 | 13 |
gastrointestinal system mucosa | 8.81e-20 | 13 |
organ component layer | 1.80e-16 | 24 |
small intestine | 3.12e-11 | 4 |
epithelium of mucosa | 1.10e-10 | 9 |
gastrointestinal system epithelium | 1.10e-10 | 9 |
intestinal epithelium | 1.10e-10 | 9 |
endoderm-derived structure | 3.24e-09 | 118 |
endoderm | 3.24e-09 | 118 |
presumptive endoderm | 3.24e-09 | 118 |
ileal mucosa | 9.89e-09 | 3 |
ileum | 9.89e-09 | 3 |
mucosa of small intestine | 9.89e-09 | 3 |
wall of small intestine | 9.89e-09 | 3 |
simple columnar epithelium | 1.29e-08 | 11 |
digestive system | 1.54e-08 | 116 |
digestive tract | 1.54e-08 | 116 |
primitive gut | 1.54e-08 | 116 |
subdivision of digestive tract | 5.38e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.91e-08 | 3 |
immune system cancer | 2.91e-08 | 3 |
leukemia | 2.91e-08 | 3 |