FFCP PHASE1:Mm9::chr12:112659756..112659772,+: Difference between revisions
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|id=chr12:112659756..112659772,+
|short_description=p6@1200009I06Rik
|description=CAGE_peak_6_at_1200009I06Rik_5end
|association_with_transcript=46bp_to_uc011yuw.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74190 | |EntrezGene=74190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_uc011yuw.1_5end | |||
|cluster_id=chr12:112659756..112659772,+ | |||
|description=CAGE_peak_6_at_1200009I06Rik_5end | |||
|id=chr12:112659756..112659772,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.46e-10,6;CL:0000677,3.46e-10,6;CL:0000584,3.46e-10,6;CL:0000075,9.65e-09,7;CL:0002563,8.28e-07,9;CL:0002251,8.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.59e-14!43;UBERON:0004923!2.32e-12!24;UBERON:0005409!4.86e-11!59;UBERON:0000344!3.49e-10!15;UBERON:0001242!4.37e-10!13;UBERON:0000060!4.37e-10!13;UBERON:0001262!4.37e-10!13;UBERON:0004786!4.37e-10!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.21e-20,31;UBERON:0004923,8.26e-14,24;UBERON:0001242,4.50e-13,13;UBERON:0001262,4.50e-13,13;UBERON:0004786,4.50e-13,13;UBERON:0005409,2.31e-12,47;UBERON:0005631,4.90e-12,3;UBERON:0000478,4.90e-12,3;UBERON:0000158,4.90e-12,3;UBERON:0000344,3.25e-11,15;UBERON:0001987,8.30e-09,2;UBERON:0003124,8.30e-09,2;UBERON:0004340,8.30e-09,2;UBERON:0002108,2.41e-08,4;UBERON:0003350,8.28e-07,9;UBERON:0004808,8.28e-07,9;UBERON:0001277,8.28e-07,9 | |||
|phase1_expression=0,2.44282785347553,1.81999695755814,9.37639055051173,8.5152274090879,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0.47997726838022,0,2.8711598205751,1.29228598847722,0.430942465371778,2.85035129184561,1.00812051903972,0.443461021310609,10.7955214488137,17.8368788399525,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0.484875253135222,0,0,0,1.53274233125155,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.0108910337347,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,5.28670052774077,0.793351699990633,0,0,0,0,0.22237804384487,0.760902504450237,1.89811624617805,2.79988223030818,0.754005626400808,1.1937388322469,0.58489226135736,2.69645822596266,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,13.7690846061483,0,0,0,0,0,0,1.45740418314925,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0.448569283047378,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.44282785347553,1.81999695755814,9.37639055051173,8.5152274090879,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0.47997726838022,0,2.8711598205751,1.29228598847722,0.430942465371778,2.85035129184561,1.00812051903972,0.443461021310609,10.7955214488137,17.8368788399525,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0.484875253135222,0,0,0,1.53274233125155,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.0108910337347,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,5.28670052774077,0.793351699990633,0,0,0,0,0.22237804384487,0.760902504450237,1.89811624617805,2.79988223030818,0.754005626400808,1.1937388322469,0.58489226135736,2.69645822596266,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,13.7690846061483,0,0,0,0,0,0,1.45740418314925,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0.448569283047378,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p6@1200009I06Rik | |||
}} | }} |
Latest revision as of 08:27, 26 September 2015
Short description: | p6@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_1200009I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 46bp_to_uc011yuw.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.46e-10 | 6 |
gut absorptive cell | 3.46e-10 | 6 |
enterocyte | 3.46e-10 | 6 |
columnar/cuboidal epithelial cell | 9.65e-09 | 7 |
intestinal epithelial cell | 8.28e-07 | 9 |
epithelial cell of alimentary canal | 8.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.21e-20 | 31 |
organ component layer | 8.26e-14 | 24 |
intestinal mucosa | 4.50e-13 | 13 |
wall of intestine | 4.50e-13 | 13 |
gastrointestinal system mucosa | 4.50e-13 | 13 |
gastrointestinal system | 2.31e-12 | 47 |
extraembryonic membrane | 4.90e-12 | 3 |
extraembryonic structure | 4.90e-12 | 3 |
membranous layer | 4.90e-12 | 3 |
mucosa | 3.25e-11 | 15 |
placenta | 8.30e-09 | 2 |
chorion | 8.30e-09 | 2 |
allantois | 8.30e-09 | 2 |
small intestine | 2.41e-08 | 4 |
epithelium of mucosa | 8.28e-07 | 9 |
gastrointestinal system epithelium | 8.28e-07 | 9 |
intestinal epithelium | 8.28e-07 | 9 |