FFCP PHASE1:Mm9::chr12:77182632..77182648,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:77182632..77182648,+
|short_description=p5@Syne2
|description=CAGE_peak_5_at_Syne2_5end
|association_with_transcript=0bp_to_ENSMUST00000154509_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319565 | |EntrezGene=319565 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z412 | |UniProt=D3Z412 | ||
|association_with_transcript=0bp_to_ENSMUST00000154509_5end | |||
|cluster_id=chr12:77182632..77182648,+ | |||
|description=CAGE_peak_5_at_Syne2_5end | |||
|id=chr12:77182632..77182648,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.20e-09!9;CL:0002251!1.20e-09!9;CL:0000075!4.79e-07!7;CL:0000239!4.79e-07!6;CL:0000677!4.79e-07!6;CL:0000212!4.79e-07!6;CL:0000584!4.79e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.06e-23,9;CL:0002251,5.06e-23,9;CL:0000239,4.00e-16,6;CL:0000677,4.00e-16,6;CL:0000584,4.00e-16,6;CL:0000075,1.02e-13,7;CL:0002076,3.90e-13,15;CL:0000066,6.16e-13,25;CL:0000223,1.97e-09,20;CL:0002250,1.80e-08,3;CL:0000682,3.23e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.21e-15!15;UBERON:0001242!3.43e-13!13;UBERON:0000060!3.43e-13!13;UBERON:0001262!3.43e-13!13;UBERON:0004786!3.43e-13!13;UBERON:0000160!2.62e-12!43;UBERON:0000485!2.76e-10!11;UBERON:0003350!1.20e-09!9;UBERON:0004808!1.20e-09!9;UBERON:0001277!1.20e-09!9;UBERON:0005409!3.33e-08!59;UBERON:0002020!3.71e-07!34;UBERON:0004923!3.88e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.10e-38,31;UBERON:0000344,7.89e-33,15;UBERON:0001242,3.37e-28,13;UBERON:0001262,3.37e-28,13;UBERON:0004786,3.37e-28,13;UBERON:0005409,8.11e-26,47;UBERON:0003350,5.06e-23,9;UBERON:0004808,5.06e-23,9;UBERON:0001277,5.06e-23,9;UBERON:0004923,2.57e-19,24;UBERON:0000485,1.58e-18,11;UBERON:0001007,3.18e-09,116;UBERON:0001555,3.18e-09,116;UBERON:0007026,3.18e-09,116;UBERON:0004119,5.67e-09,118;UBERON:0000925,5.67e-09,118;UBERON:0006595,5.67e-09,118;UBERON:0004921,1.41e-07,114;UBERON:0002108,3.83e-07,4 | |||
|phase1_expression=0.640595388419176,3.14077866875425,4.09499315450582,9.37639055051173,3.00537437967808,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.99981056983517,1.60586496747019,1.72269589234506,2.15380998079537,3.01659725760245,3.6104449696711,6.5527833737582,0.665191531965914,0,0,0,4.04392267651784,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0.919218786610021,0,0.255374676170375,0,1.18697658957174,0.640413505216868,0,0,0,0,0.589257170947335,0.996601765593721,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,4.08731288333746,0,0,0,0.449371918214468,0,1.25654352112864,0,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.420579897128254,1.85228302282712,3.63460661282178,4.23120906661671,0,0,0.257734922644187,2.62188582010345,1.77902435075896,0.760902504450237,3.32170343081158,0.329397909448022,0.251335208800269,0.795825888164603,1.75467678407208,2.69645822596266,4.75503709724327,4.18196673834171,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,1.16653475962614,0,0.56369293868419,0,0,0,0.258319646955462,0,0,0.13020438484395,0.419437377702843,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,1.84130094602871,1.14579102687879,0.343706364687375,0,0.755393897389701,0,0,0.906284817968409,1.55328093525546,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0.640595388419176,3.14077866875425,4.09499315450582,9.37639055051173,3.00537437967808,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.99981056983517,1.60586496747019,1.72269589234506,2.15380998079537,3.01659725760245,3.6104449696711,6.5527833737582,0.665191531965914,0,0,0,4.04392267651784,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0.919218786610021,0,0.255374676170375,0,1.18697658957174,0.640413505216868,0,0,0,0,0.589257170947335,0.996601765593721,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,4.08731288333746,0,0,0,0.449371918214468,0,1.25654352112864,0,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.420579897128254,1.85228302282712,3.63460661282178,4.23120906661671,0,0,0.257734922644187,2.62188582010345,1.77902435075896,0.760902504450237,3.32170343081158,0.329397909448022,0.251335208800269,0.795825888164603,1.75467678407208,2.69645822596266,4.75503709724327,4.18196673834171,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,1.16653475962614,0,0.56369293868419,0,0,0,0.258319646955462,0,0,0.13020438484395,0.419437377702843,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,1.84130094602871,1.14579102687879,0.343706364687375,0,0.755393897389701,0,0,0.906284817968409,1.55328093525546,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p5@Syne2 | |||
}} | }} |
Latest revision as of 19:15, 26 September 2015
Short description: | p5@Syne2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Syne2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000154509_5end |
EntrezGene: | Syne2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.06e-23 | 9 |
epithelial cell of alimentary canal | 5.06e-23 | 9 |
brush border epithelial cell | 4.00e-16 | 6 |
gut absorptive cell | 4.00e-16 | 6 |
enterocyte | 4.00e-16 | 6 |
columnar/cuboidal epithelial cell | 1.02e-13 | 7 |
endo-epithelial cell | 3.90e-13 | 15 |
epithelial cell | 6.16e-13 | 25 |
endodermal cell | 1.97e-09 | 20 |
intestinal crypt stem cell | 1.80e-08 | 3 |
M cell of gut | 3.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.10e-38 | 31 |
mucosa | 7.89e-33 | 15 |
intestinal mucosa | 3.37e-28 | 13 |
wall of intestine | 3.37e-28 | 13 |
gastrointestinal system mucosa | 3.37e-28 | 13 |
gastrointestinal system | 8.11e-26 | 47 |
epithelium of mucosa | 5.06e-23 | 9 |
gastrointestinal system epithelium | 5.06e-23 | 9 |
intestinal epithelium | 5.06e-23 | 9 |
organ component layer | 2.57e-19 | 24 |
simple columnar epithelium | 1.58e-18 | 11 |
digestive system | 3.18e-09 | 116 |
digestive tract | 3.18e-09 | 116 |
primitive gut | 3.18e-09 | 116 |
endoderm-derived structure | 5.67e-09 | 118 |
endoderm | 5.67e-09 | 118 |
presumptive endoderm | 5.67e-09 | 118 |
subdivision of digestive tract | 1.41e-07 | 114 |
small intestine | 3.83e-07 | 4 |