FFCP PHASE1:Mm9::chr13:101322621..101322632,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:101322621..101322632,-
|short_description=p4@Ocln
|description=CAGE_peak_4_at_Ocln_5end
|association_with_transcript=40bp_to_ENSMUST00000022140_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18260 | |EntrezGene=18260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q61146 | |UniProt=Q61146 | ||
|association_with_transcript=40bp_to_ENSMUST00000022140_5end | |||
|cluster_id=chr13:101322621..101322632,- | |||
|description=CAGE_peak_4_at_Ocln_5end | |||
|id=chr13:101322621..101322632,- | |||
|ontology_enrichment_celltype=CL:0000066!5.74e-10!25;CL:0000223!1.87e-08!20;CL:0002563!2.37e-07!9;CL:0002251!2.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.09e-16,20;CL:0000066,7.52e-16,25;CL:0002563,1.84e-12,9;CL:0002251,1.84e-12,9;CL:0002076,8.79e-12,15;CL:0000239,1.73e-09,6;CL:0000677,1.73e-09,6;CL:0000584,1.73e-09,6;CL:0000075,6.10e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.46e-22!130;UBERON:0000925!1.46e-22!130;UBERON:0006595!1.46e-22!130;UBERON:0001007!4.65e-22!128;UBERON:0001555!4.65e-22!128;UBERON:0007026!4.65e-22!128;UBERON:0004921!1.13e-20!126;UBERON:0004185!1.13e-20!126;UBERON:0000160!1.51e-18!43;UBERON:0005409!3.19e-17!59;UBERON:0000344!1.04e-11!15;UBERON:0001242!2.75e-10!13;UBERON:0000060!2.75e-10!13;UBERON:0001262!2.75e-10!13;UBERON:0004786!2.75e-10!13;UBERON:0000466!2.42e-09!79;UBERON:0005177!2.60e-08!85;UBERON:0002365!7.46e-08!25;UBERON:0002330!7.46e-08!25;UBERON:0000481!7.51e-08!230;UBERON:0009569!1.04e-07!66;UBERON:0000485!1.53e-07!11;UBERON:0003350!2.37e-07!9;UBERON:0004808!2.37e-07!9;UBERON:0001277!2.37e-07!9;UBERON:0009854!2.70e-07!23;UBERON:0009856!2.70e-07!23;UBERON:0000077!6.87e-07!97;UBERON:0004923!9.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.03e-30,31;UBERON:0005409,1.37e-27,47;UBERON:0001007,5.79e-26,116;UBERON:0001555,5.79e-26,116;UBERON:0007026,5.79e-26,116;UBERON:0004119,3.05e-25,118;UBERON:0000925,3.05e-25,118;UBERON:0006595,3.05e-25,118;UBERON:0004921,8.07e-24,114;UBERON:0000344,1.17e-20,15;UBERON:0001242,5.63e-18,13;UBERON:0001262,5.63e-18,13;UBERON:0004786,5.63e-18,13;UBERON:0004923,7.38e-13,24;UBERON:0003350,1.84e-12,9;UBERON:0004808,1.84e-12,9;UBERON:0001277,1.84e-12,9;UBERON:0000485,9.66e-10,11;UBERON:0011216,4.41e-08,194;UBERON:0002108,7.87e-07,4 | |||
|phase1_expression=0.960893082628764,6.63053274514786,4.54999239389536,6.35174843744343,8.01433167914156,3.52546471014969,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,4.5881856213434,2.29692785646008,0.430761996159075,2.37018355954478,5.89072600314759,5.29263272495855,5.76499327703792,0,0,0,2.59966457776147,1.49611180822643,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.45839474333043,0,0,0,0,0,1.44932244350839,0.860423876981386,3.39985666853875,2.15881276655127,1.94932925234301,1.79210754838934,0.561777680527007,0,0,0,0.563373679106722,0,0,0,2.16491041011214,2.28023878927589,2.52762222507392,0.79928715803342,0,0,0,0,0.230615497256059,0,0.352766121407114,0,4.20231445148436,0,0,0,0,0,3.72783522436244,0.292780797011547,0.628340120440365,3.57639877292028,0.11981512450592,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0,0,0.62336413367868,0.162241263067758,0.407357455401265,0.124406970610093,0.758168275301024,0.841767423545896,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.630869845692382,0.411618449517138,4.62586296177317,1.58670339998127,0.213288250535234,0,1.54640953586512,2.01683524623343,0.889512175379481,2.09248188723815,1.42358718463353,2.79988223030818,3.01602250560323,2.98434708061726,2.9244613067868,3.59527763461689,1.94524244887225,3.18626037206988,0,0.228497025219458,1.1270773567308,0.814605311381257,0.775809948670503,0.911765658574141,0.632365371242573,0.738050739898011,0.941992367048249,1.1105744752962,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,1.15078454980324,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,0.896987067609561,2.41221760681684,1.84753190166605,0.37898282354097,0,0.678980343100753,1.17345124144251,1.17254380209271,0.714130922658041,1.75620283072019,1.10344600874334,0.44292937929755,0.797273843287435,1.3109065177259,1.03610989119537,0.578596234326046,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,1.21390318077491,1.209294227859,0.188605079755898,1.47650946440386,0.614870295887855,1.03371317267288,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,0,0,0.646793418913773,1.07168517515796,0.354680467284547,0,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0.220528398054962,0.8244312647074,0.322928853391811,0.542816324353403,1.43246812803764,0.164140899745061,2.91480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,2.23651413839534,1.08005340821801,1.25452977608681,1.52853794622324,1.34864346384821,0.826534557253359,1.04702376793612,1.94422459937689,1.86401793926078,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.651021924219751,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,1.71494703263253,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.128050304809739,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0 | |phase1_expression=0.960893082628764,6.63053274514786,4.54999239389536,6.35174843744343,8.01433167914156,3.52546471014969,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,4.5881856213434,2.29692785646008,0.430761996159075,2.37018355954478,5.89072600314759,5.29263272495855,5.76499327703792,0,0,0,2.59966457776147,1.49611180822643,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.45839474333043,0,0,0,0,0,1.44932244350839,0.860423876981386,3.39985666853875,2.15881276655127,1.94932925234301,1.79210754838934,0.561777680527007,0,0,0,0.563373679106722,0,0,0,2.16491041011214,2.28023878927589,2.52762222507392,0.79928715803342,0,0,0,0,0.230615497256059,0,0.352766121407114,0,4.20231445148436,0,0,0,0,0,3.72783522436244,0.292780797011547,0.628340120440365,3.57639877292028,0.11981512450592,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0,0,0.62336413367868,0.162241263067758,0.407357455401265,0.124406970610093,0.758168275301024,0.841767423545896,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.630869845692382,0.411618449517138,4.62586296177317,1.58670339998127,0.213288250535234,0,1.54640953586512,2.01683524623343,0.889512175379481,2.09248188723815,1.42358718463353,2.79988223030818,3.01602250560323,2.98434708061726,2.9244613067868,3.59527763461689,1.94524244887225,3.18626037206988,0,0.228497025219458,1.1270773567308,0.814605311381257,0.775809948670503,0.911765658574141,0.632365371242573,0.738050739898011,0.941992367048249,1.1105744752962,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,1.15078454980324,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,0.896987067609561,2.41221760681684,1.84753190166605,0.37898282354097,0,0.678980343100753,1.17345124144251,1.17254380209271,0.714130922658041,1.75620283072019,1.10344600874334,0.44292937929755,0.797273843287435,1.3109065177259,1.03610989119537,0.578596234326046,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,1.21390318077491,1.209294227859,0.188605079755898,1.47650946440386,0.614870295887855,1.03371317267288,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,0,0,0.646793418913773,1.07168517515796,0.354680467284547,0,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0.220528398054962,0.8244312647074,0.322928853391811,0.542816324353403,1.43246812803764,0.164140899745061,2.91480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,2.23651413839534,1.08005340821801,1.25452977608681,1.52853794622324,1.34864346384821,0.826534557253359,1.04702376793612,1.94422459937689,1.86401793926078,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.651021924219751,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,1.71494703263253,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.128050304809739,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0 | ||
|short_description=p4@Ocln | |||
}} | }} |
Latest revision as of 01:07, 27 September 2015
Short description: | p4@Ocln |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ocln_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 40bp_to_ENSMUST00000022140_5end |
EntrezGene: | Ocln |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.09e-16 | 20 |
epithelial cell | 7.52e-16 | 25 |
intestinal epithelial cell | 1.84e-12 | 9 |
epithelial cell of alimentary canal | 1.84e-12 | 9 |
endo-epithelial cell | 8.79e-12 | 15 |
brush border epithelial cell | 1.73e-09 | 6 |
gut absorptive cell | 1.73e-09 | 6 |
enterocyte | 1.73e-09 | 6 |
columnar/cuboidal epithelial cell | 6.10e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.03e-30 | 31 |
gastrointestinal system | 1.37e-27 | 47 |
digestive system | 5.79e-26 | 116 |
digestive tract | 5.79e-26 | 116 |
primitive gut | 5.79e-26 | 116 |
endoderm-derived structure | 3.05e-25 | 118 |
endoderm | 3.05e-25 | 118 |
presumptive endoderm | 3.05e-25 | 118 |
subdivision of digestive tract | 8.07e-24 | 114 |
mucosa | 1.17e-20 | 15 |
intestinal mucosa | 5.63e-18 | 13 |
wall of intestine | 5.63e-18 | 13 |
gastrointestinal system mucosa | 5.63e-18 | 13 |
organ component layer | 7.38e-13 | 24 |
epithelium of mucosa | 1.84e-12 | 9 |
gastrointestinal system epithelium | 1.84e-12 | 9 |
intestinal epithelium | 1.84e-12 | 9 |
simple columnar epithelium | 9.66e-10 | 11 |
organ system subdivision | 4.41e-08 | 194 |
small intestine | 7.87e-07 | 4 |