FFCP PHASE1:Hg19::chr3:42755652..42755664,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=152206 | |EntrezGene=152206 | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000466031_5end | |association_with_transcript=-11bp_to_ENST00000466031_5end | ||
|cluster_id=chr3:42755652..42755664,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_5_at_CCDC13_5end | |description=CAGE_peak_5_at_CCDC13_5end | ||
Latest revision as of 06:45, 18 September 2015
| Short description: | p5@CCDC13 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CCDC13_5end |
| Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
| Association with transcript: | -11bp_to_ENST00000466031_5end |
| EntrezGene: | CCDC13 |
| HGNC: | 26358 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@CCDC13 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| eye | 1.02e-13 | 21 |
| visual system | 1.02e-13 | 21 |
| retina | 2.19e-12 | 6 |
| photoreceptor array | 2.19e-12 | 6 |
| posterior segment of eyeball | 2.19e-12 | 6 |
| sense organ | 3.75e-12 | 24 |
| sensory system | 3.75e-12 | 24 |
| entire sense organ system | 3.75e-12 | 24 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system cancer | 8.38e-07 | 11 |
Showing 1 to 1 of 1 entries
