FFCP PHASE1:Mm9::chr13:95028641..95028661,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:95028641..95028661,-
|short_description=p@chr13:95028641..95028661,-
|description=CAGE_peak_at_chr13:95028641..95028661,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:95028641..95028661,- | |||
|description=CAGE_peak_at_chr13:95028641..95028661,- | |||
|id=chr13:95028641..95028661,- | |||
|ontology_enrichment_celltype=CL:0000473!8.16e-08!3;CL:0000627!8.16e-08!3;CL:0000682!8.16e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.54e-07,6;CL:0000677,8.54e-07,6;CL:0000584,8.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.74e-16!43;UBERON:0005409!1.81e-13!59;UBERON:0000344!4.58e-12!15;UBERON:0001242!1.13e-08!13;UBERON:0000060!1.13e-08!13;UBERON:0001262!1.13e-08!13;UBERON:0004786!1.13e-08!13;UBERON:0001007!5.86e-07!128;UBERON:0001555!5.86e-07!128;UBERON:0007026!5.86e-07!128;UBERON:0004923!6.97e-07!24;UBERON:0004119!9.22e-07!130;UBERON:0000925!9.22e-07!130;UBERON:0006595!9.22e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.71e-21,31;UBERON:0000344,1.87e-16,15;UBERON:0005409,4.70e-15,47;UBERON:0001242,4.12e-11,13;UBERON:0001262,4.12e-11,13;UBERON:0004786,4.12e-11,13;UBERON:0004923,6.99e-10,24;UBERON:0002108,9.11e-10,4;UBERON:0001962,1.08e-08,2;UBERON:0001961,1.08e-08,2;UBERON:0001744,1.08e-08,2;UBERON:0001007,2.08e-07,116;UBERON:0001555,2.08e-07,116;UBERON:0007026,2.08e-07,116;UBERON:0004119,3.13e-07,118;UBERON:0000925,3.13e-07,118;UBERON:0006595,3.13e-07,118 | |||
|phase1_expression=0,1.04692622291808,0,8.46899791659124,8.5152274090879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.60586496747019,2.8711598205751,0.86152399231815,1.939241094173,2.85035129184561,3.2763916868791,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03224198387602,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,4.49565963328025,0,0,0,0.403367049246685,0,0.190225626112559,9.01605216934572,0.494096864172033,0,0,0.38992817423824,5.39291645192533,6.26800344636613,7.96565093017469,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.738050739898011,1.09899109488962,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0,8.46899791659124,8.5152274090879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.60586496747019,2.8711598205751,0.86152399231815,1.939241094173,2.85035129184561,3.2763916868791,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03224198387602,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,4.49565963328025,0,0,0,0.403367049246685,0,0.190225626112559,9.01605216934572,0.494096864172033,0,0,0.38992817423824,5.39291645192533,6.26800344636613,7.96565093017469,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.738050739898011,1.09899109488962,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:95028641..95028661,- | |||
}} | }} |
Latest revision as of 19:36, 3 August 2015
Short description: | p@chr13:95028641..95028661, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:95028641..95028661, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.54e-07 | 6 |
gut absorptive cell | 8.54e-07 | 6 |
enterocyte | 8.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.71e-21 | 31 |
mucosa | 1.87e-16 | 15 |
gastrointestinal system | 4.70e-15 | 47 |
intestinal mucosa | 4.12e-11 | 13 |
wall of intestine | 4.12e-11 | 13 |
gastrointestinal system mucosa | 4.12e-11 | 13 |
organ component layer | 6.99e-10 | 24 |
small intestine | 9.11e-10 | 4 |
gut-associated lymphoid tissue | 1.08e-08 | 2 |
mucosa-associated lymphoid tissue | 1.08e-08 | 2 |
lymphoid tissue | 1.08e-08 | 2 |
digestive system | 2.08e-07 | 116 |
digestive tract | 2.08e-07 | 116 |
primitive gut | 2.08e-07 | 116 |
endoderm-derived structure | 3.13e-07 | 118 |
endoderm | 3.13e-07 | 118 |
presumptive endoderm | 3.13e-07 | 118 |