FFCP PHASE1:Mm9::chr14:55028848..55028863,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:55028848..55028863,-
|short_description=p@chr14:55028848..55028863,-
|description=CAGE_peak_at_chr14:55028848..55028863,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:55028848..55028863,- | |||
|description=CAGE_peak_at_chr14:55028848..55028863,- | |||
|id=chr14:55028848..55028863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-09,9;CL:0002251,1.64e-09,9;CL:0000075,2.62e-08,7;CL:0000239,5.58e-08,6;CL:0000677,5.58e-08,6;CL:0000584,5.58e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.95e-12!59;UBERON:0000160!5.47e-12!43;UBERON:0004923!4.43e-10!24;UBERON:0000344!6.57e-10!15;UBERON:0001242!8.63e-09!13;UBERON:0000060!8.63e-09!13;UBERON:0001262!8.63e-09!13;UBERON:0004786!8.63e-09!13;UBERON:0004119!2.01e-07!130;UBERON:0000925!2.01e-07!130;UBERON:0006595!2.01e-07!130;UBERON:0001007!6.67e-07!128;UBERON:0001555!6.67e-07!128;UBERON:0007026!6.67e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.35e-28,31;UBERON:0005409,1.10e-21,47;UBERON:0000344,4.49e-16,15;UBERON:0001242,3.94e-14,13;UBERON:0001262,3.94e-14,13;UBERON:0004786,3.94e-14,13;UBERON:0004923,1.45e-13,24;UBERON:0004119,1.22e-10,118;UBERON:0000925,1.22e-10,118;UBERON:0006595,1.22e-10,118;UBERON:0001007,8.93e-10,116;UBERON:0001555,8.93e-10,116;UBERON:0007026,8.93e-10,116;UBERON:0003350,1.64e-09,9;UBERON:0004808,1.64e-09,9;UBERON:0001277,1.64e-09,9;UBERON:0000485,9.53e-09,11;UBERON:0004921,1.10e-08,114 | |||
|phase1_expression=0.960893082628764,24.7772539423946,24.1149596876454,28.431635862842,26.0465779572101,1.84667199103079,4.90586545250604,0,0,0,0,0,0,0,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0.510259740906419,0,0,7.1996590257033,7.79991555628378,24.6919744569459,15.5074318617267,13.574687659211,32.3039813075836,19.4063199915147,18.8470934057009,0,0,0,1.44425809875637,1.16364251750945,1.63335485009895,1.25559489221072,1.5626706890476,1.0470474879476,4.1176204162171,2.04913645487534,3.39857247121808,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0.528990979272033,0,0,0,8.09909745553259,19.7773272513395,11.3676818391376,4.49400165777607,1.15265491596466,0,0,0.630974884054146,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,1.06016670666458,4.6854367266207,1.15945795480671,1.72084775396277,0,0.539703191637817,0,0,0.842666520790511,0.340860645156116,0,0,1.12674735821344,0,0,0,0.649473123033642,0.506719730950197,0,3.31133251185274,1.8125651855302,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,7.41584903203122,0.433798070759735,1.76922110389975,0.485300549842228,0.662524555381181,0.484875253135222,1.86391761218122,0,0,22.480220858356,0.11981512450592,0.599902730993408,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.746441823660558,0,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0.702213187313235,0.257347907114715,1.13665399758237,0,1.17263029990548,0.540186184383045,0,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,11.8950761874167,16.9248362664668,0.213288250535234,0.696710015581316,2.57734922644187,8.0673409849337,8.67274370994994,16.7398550979052,9.49058123089023,14.658206970437,6.03204501120647,5.57078121715222,7.60359939764569,13.4822911298133,7.3486936957396,10.3553462092271,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,1.1221731182451,0.758838445491087,0.885660887877613,1.255989822731,0.987177311374404,0.592905254174298,0.333690211432188,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,1.43848068725405,0.324270453550071,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.339490171550376,0.234690248288502,0.335012514883631,1.6663054862021,0.780534591431195,1.10344600874334,2.6575762757853,1.11618338060241,1.47476983244164,1.55416483679306,1.88043776155965,0,5.4390568381871,0.491764273019036,2.48343071674259,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,1.48473110675282,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,3.6179961043551,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,1.40803024838226,1.48282449604674,0,0,0.484393280087717,0.482503399425247,0.358117032009409,0,10.7847909553045,0.18542530201051,0.341741761595705,1.65109494370578,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,2.37611749807963,2.09088296014469,1.74690050996942,0.674321731924103,0.247960367176008,0.26175594198403,1.29614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.209718688851422,0,0,0.632022241256357,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,1.12609485270709,3.11357761254351,0.857473516316263,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,1.01078884705519,1.2673964994512,1.13175804831646,0.842773567228942,0.768301828858431,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.930760686808441,0.73171189149109,1.05227884575137,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,1.22769312950907,0.309873682371932,1.35034627686799,0.249810577937946,1.63752125911786,1.93383948643468,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.960893082628764,24.7772539423946,24.1149596876454,28.431635862842,26.0465779572101,1.84667199103079,4.90586545250604,0,0,0,0,0,0,0,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0.510259740906419,0,0,7.1996590257033,7.79991555628378,24.6919744569459,15.5074318617267,13.574687659211,32.3039813075836,19.4063199915147,18.8470934057009,0,0,0,1.44425809875637,1.16364251750945,1.63335485009895,1.25559489221072,1.5626706890476,1.0470474879476,4.1176204162171,2.04913645487534,3.39857247121808,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0.528990979272033,0,0,0,8.09909745553259,19.7773272513395,11.3676818391376,4.49400165777607,1.15265491596466,0,0,0.630974884054146,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,1.06016670666458,4.6854367266207,1.15945795480671,1.72084775396277,0,0.539703191637817,0,0,0.842666520790511,0.340860645156116,0,0,1.12674735821344,0,0,0,0.649473123033642,0.506719730950197,0,3.31133251185274,1.8125651855302,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,7.41584903203122,0.433798070759735,1.76922110389975,0.485300549842228,0.662524555381181,0.484875253135222,1.86391761218122,0,0,22.480220858356,0.11981512450592,0.599902730993408,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.746441823660558,0,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0.702213187313235,0.257347907114715,1.13665399758237,0,1.17263029990548,0.540186184383045,0,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,11.8950761874167,16.9248362664668,0.213288250535234,0.696710015581316,2.57734922644187,8.0673409849337,8.67274370994994,16.7398550979052,9.49058123089023,14.658206970437,6.03204501120647,5.57078121715222,7.60359939764569,13.4822911298133,7.3486936957396,10.3553462092271,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,1.1221731182451,0.758838445491087,0.885660887877613,1.255989822731,0.987177311374404,0.592905254174298,0.333690211432188,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,1.43848068725405,0.324270453550071,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.339490171550376,0.234690248288502,0.335012514883631,1.6663054862021,0.780534591431195,1.10344600874334,2.6575762757853,1.11618338060241,1.47476983244164,1.55416483679306,1.88043776155965,0,5.4390568381871,0.491764273019036,2.48343071674259,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,1.48473110675282,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,3.6179961043551,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,1.40803024838226,1.48282449604674,0,0,0.484393280087717,0.482503399425247,0.358117032009409,0,10.7847909553045,0.18542530201051,0.341741761595705,1.65109494370578,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,2.37611749807963,2.09088296014469,1.74690050996942,0.674321731924103,0.247960367176008,0.26175594198403,1.29614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.209718688851422,0,0,0.632022241256357,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,1.12609485270709,3.11357761254351,0.857473516316263,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,1.01078884705519,1.2673964994512,1.13175804831646,0.842773567228942,0.768301828858431,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.930760686808441,0.73171189149109,1.05227884575137,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,1.22769312950907,0.309873682371932,1.35034627686799,0.249810577937946,1.63752125911786,1.93383948643468,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr14:55028848..55028863,- | |||
}} | }} |
Latest revision as of 11:03, 4 August 2015
Short description: | p@chr14:55028848..55028863, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55028848..55028863, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.64e-09 | 9 |
epithelial cell of alimentary canal | 1.64e-09 | 9 |
columnar/cuboidal epithelial cell | 2.62e-08 | 7 |
brush border epithelial cell | 5.58e-08 | 6 |
gut absorptive cell | 5.58e-08 | 6 |
enterocyte | 5.58e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.35e-28 | 31 |
gastrointestinal system | 1.10e-21 | 47 |
mucosa | 4.49e-16 | 15 |
intestinal mucosa | 3.94e-14 | 13 |
wall of intestine | 3.94e-14 | 13 |
gastrointestinal system mucosa | 3.94e-14 | 13 |
organ component layer | 1.45e-13 | 24 |
endoderm-derived structure | 1.22e-10 | 118 |
endoderm | 1.22e-10 | 118 |
presumptive endoderm | 1.22e-10 | 118 |
digestive system | 8.93e-10 | 116 |
digestive tract | 8.93e-10 | 116 |
primitive gut | 8.93e-10 | 116 |
epithelium of mucosa | 1.64e-09 | 9 |
gastrointestinal system epithelium | 1.64e-09 | 9 |
intestinal epithelium | 1.64e-09 | 9 |
simple columnar epithelium | 9.53e-09 | 11 |
subdivision of digestive tract | 1.10e-08 | 114 |