FFCP PHASE1:Hg19::chr9:124030049..124030099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q5T0I0,Q5T0I1 | |UniProt=Q5T0I0,Q5T0I1 | ||
|association_with_transcript=-238bp_to_ENST00000432226,ENST00000449773_5end | |association_with_transcript=-238bp_to_ENST00000432226,ENST00000449773_5end | ||
|cluster_id=chr9:124030049..124030099,+ | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_7_at_GSN_5end | |description=CAGE_peak_7_at_GSN_5end | ||
Latest revision as of 20:38, 24 September 2015
| Short description: | p7@GSN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_GSN_5end |
| Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
| Association with transcript: | -238bp_to_ENST00000432226, ENST00000449773_5end |
| EntrezGene: | GSN |
| HGNC: | 4620 |
| UniProt: | Q5T0I0Q5T0I1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@GSN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| conventional dendritic cell | 4.73e-23 | 8 |
| dendritic cell | 1.44e-18 | 10 |
| Langerhans cell | 7.50e-17 | 5 |
| immature conventional dendritic cell | 3.03e-14 | 5 |
| common dendritic progenitor | 3.03e-14 | 5 |
| macrophage | 1.52e-13 | 6 |
| CD1a-positive Langerhans cell | 7.14e-08 | 2 |
| immature CD1a-positive Langerhans cell | 7.14e-08 | 2 |
| smooth muscle cell of the umbilical artery | 1.03e-07 | 4 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| umbilical artery | 1.03e-07 | 4 |
| multi cell component structure | 1.65e-07 | 2 |
| neuron projection bundle | 1.65e-07 | 2 |
Showing 1 to 3 of 3 entries
