FFCP PHASE1:Mm9::chr15:35300864..35300893,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:35300864..35300893,+
|short_description=p2@Vps13b
|description=CAGE_peak_2_at_Vps13b_5end
|association_with_transcript=-407bp_to_ENSMUST00000048646,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=666173 | |EntrezGene=666173 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=411 | |||
|TSSclassifier=NA | |||
|UniProt=E9QKX5,E9QAL5,Q80TY5 | |UniProt=E9QKX5,E9QAL5,Q80TY5 | ||
|association_with_transcript=-407bp_to_ENSMUST00000048646,ENSMUST00000171603,NM_177151,uc007vme.1,uc007vmh.2,uc011zsa.1_5end | |||
|cluster_id=chr15:35300864..35300893,+ | |||
|description=CAGE_peak_2_at_Vps13b_5end | |||
|id=chr15:35300864..35300893,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.15e-07!70;UBERON:0001007!5.45e-07!128;UBERON:0001555!5.45e-07!128;UBERON:0007026!5.45e-07!128;UBERON:0004921!6.76e-07!126;UBERON:0004185!6.76e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.17e-08,116;UBERON:0001555,1.17e-08,116;UBERON:0007026,1.17e-08,116;UBERON:0004921,1.43e-08,114;UBERON:0004119,3.88e-08,118;UBERON:0000925,3.88e-08,118;UBERON:0006595,3.88e-08,118 | |||
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| ||
|short_description=p2@Vps13b | |||
}} | }} |
Latest revision as of 17:51, 26 September 2015
Short description: | p2@Vps13b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vps13b_5end |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | -407bp_to_ENSMUST00000048646, ENSMUST00000171603, NM_177151, uc007vme.1, uc007vmh.2, uc011zsa.1_5end |
EntrezGene: | Vps13b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.17e-08 | 116 |
digestive tract | 1.17e-08 | 116 |
primitive gut | 1.17e-08 | 116 |
subdivision of digestive tract | 1.43e-08 | 114 |
endoderm-derived structure | 3.88e-08 | 118 |
endoderm | 3.88e-08 | 118 |
presumptive endoderm | 3.88e-08 | 118 |