DOID:0060073: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=lymphatic system cancer | |name=lymphatic system cancer | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-05-11T01:05:14Z | |obo_creation_date=2011-05-11T01:05:14Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:47, 12 September 2014
| Name: | lymphatic system cancer |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An immune system cancer that is located_in the lymphatic system and is characterized by uncontrolled cellular proliferation of lymphoid tissue." [url:http://en.wikipedia.org/wiki/Lymphatic_system] |
| Created by: | lschriml |
| Creation date: | 2011-05-11T01:05:14Z |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0060083(immune system cancer) |
|---|
Children
| is a: | DOID:8675 (lymphosarcoma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Mouse (Mus musculus)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060073 (lymphatic system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:138904824..138904829,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr9:138904824..138904829, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chrX:42727038..42727047,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chrX:42727038..42727047, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:138904824..138904829,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr9:138904824..138904829, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:26124040..26124064,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr11:26124040..26124064, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:26122006..26122011,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr11:26122006..26122011, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:66464730..66464736,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr15:66464730..66464736, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:8046897..8046900,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:8046897..8046900, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:8046897..8046900,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:8046897..8046900, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:176353908..176353917,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:176353908..176353917, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:117256221..117256231,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:117256221..117256231, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:66464730..66464736,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr15:66464730..66464736, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:176353908..176353917,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:176353908..176353917, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr11:26124040..26124064, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:8808206..8808209,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:8808206..8808209, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:117256221..117256231,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:117256221..117256231, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:4313331..4313334, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:8046990..8046993, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:8808206..8808209,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:8808206..8808209, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:8046990..8046993,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:8046990..8046993, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:176358284..176358287,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:176358284..176358287, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:4313331..4313334, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:176358284..176358287,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr4:176358284..176358287, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:122458855..122458857,+#_02bb8b51702cd84071d88aebbb80bb97 | p16@BCL7A |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:122458855..122458857,+#_02bb8b51702cd84071d88aebbb80bb97 | p16@BCL7A |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:39962295..39962305,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr6:39962295..39962305, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:89012355..89012363,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chrX:89012355..89012363, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr6:39962295..39962305, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr3:19436672..19436686, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chrX:89012355..89012363,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chrX:89012355..89012363, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr3:19436672..19436686,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr3:19436672..19436686, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:122462770..122462775,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:122462770..122462775, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr14:53594794..53594799, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:26122006..26122011,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chr11:26122006..26122011, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:39962337..39962342,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr6:39962337..39962342, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr22:23234780..23234786,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr22:23234780..23234786, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:53594794..53594799,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr14:53594794..53594799, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:39962337..39962342,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr6:39962337..39962342, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr22:23234780..23234786,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr22:23234780..23234786, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:122462770..122462775,+#_02bb8b51702cd84071d88aebbb80bb97 | p@chr12:122462770..122462775, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_02bb8b51702cd84071d88aebbb80bb97 | p@chrX:42727038..42727047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:9578005..9578014,+#_6f2e587935a20d63cff79e18a2ae204c | p22@TNKS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:176346295..176346296,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr4:176346295..176346296, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:66446191..66446202,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446191..66446202, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:122459199..122459208,+#_6f2e587935a20d63cff79e18a2ae204c | p13@BCL7A |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:176346295..176346296,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr4:176346295..176346296, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:47225953..47225964,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47225953..47225964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:560037..560049,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr10:560037..560049, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chrX:42727059..42727068,-#_6f2e587935a20d63cff79e18a2ae204c | p@chrX:42727059..42727068, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:4313305..4313315,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr12:4313305..4313315, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:71805723..71805737,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:71805723..71805737, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:71805723..71805737,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:71805723..71805737, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chrX:42727059..42727068,-#_6f2e587935a20d63cff79e18a2ae204c | p@chrX:42727059..42727068, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:47225953..47225964,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47225953..47225964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:4313305..4313315,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr12:4313305..4313315, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:106332392..106332397,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr14:106332392..106332397, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:91750002..91750014,-#_6f2e587935a20d63cff79e18a2ae204c | p21@CCDC88C |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:47225965..47225970,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47225965..47225970, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:120707790..120707797,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:120707790..120707797, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:96059957..96059996,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:96059957..96059996, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:106332392..106332397,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr14:106332392..106332397, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:120707790..120707797,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:120707790..120707797, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:96059957..96059996,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr9:96059957..96059996, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:91750002..91750014,-#_6f2e587935a20d63cff79e18a2ae204c | p21@CCDC88C |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:39962285..39962290,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr6:39962285..39962290, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:47225965..47225970,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47225965..47225970, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:39962285..39962290,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr6:39962285..39962290, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:27062798..27062805,+#_6f2e587935a20d63cff79e18a2ae204c | p15@BBOX1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:66446160..66446166,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446160..66446166, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:47226019..47226026,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47226019..47226026, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:66446160..66446166,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446160..66446166, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:47226019..47226026,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47226019..47226026, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:47143537..47143540,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47143537..47143540, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:84653070..84653073,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:84653070..84653073, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chrX:42727011..42727017,-#_6f2e587935a20d63cff79e18a2ae204c | p@chrX:42727011..42727017, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:66446174..66446184,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446174..66446184, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:560037..560049,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr10:560037..560049, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:84653070..84653073,+#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:84653070..84653073, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:27062798..27062805,+#_6f2e587935a20d63cff79e18a2ae204c | p15@BBOX1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:11905335..11905342,+#_6f2e587935a20d63cff79e18a2ae204c | p28@ETV6 |
| 9.37e-99 | FFCP PHASE2:Hg19::chrX:42727011..42727017,-#_6f2e587935a20d63cff79e18a2ae204c | p@chrX:42727011..42727017, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:47143537..47143540,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr7:47143537..47143540, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:66446174..66446184,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446174..66446184, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:11905335..11905342,+#_6f2e587935a20d63cff79e18a2ae204c | p28@ETV6 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:9578005..9578014,+#_6f2e587935a20d63cff79e18a2ae204c | p22@TNKS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:66446191..66446202,-#_6f2e587935a20d63cff79e18a2ae204c | p@chr15:66446191..66446202, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:122459199..122459208,+#_6f2e587935a20d63cff79e18a2ae204c | p13@BCL7A |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:23621457..23621480,+#_1141a9dcc077acd67e66fa22d837db11 | p@chr11:23621457..23621480, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:70016724..70016733,-#_1141a9dcc077acd67e66fa22d837db11 | p@chr17:70016724..70016733, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:78065881..78065890,-#_1141a9dcc077acd67e66fa22d837db11 | p29@LHFPL2 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:37327716..37327725,+#_1141a9dcc077acd67e66fa22d837db11 | p12@ZCCHC7 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:49585125..49585132,+#_1141a9dcc077acd67e66fa22d837db11 | p@chr8:49585125..49585132, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr4:81952607..81952617,+#_1141a9dcc077acd67e66fa22d837db11 | p7@BMP3 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:70016724..70016733,-#_1141a9dcc077acd67e66fa22d837db11 | p@chr17:70016724..70016733, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr4:81952607..81952617,+#_1141a9dcc077acd67e66fa22d837db11 | p7@BMP3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr14:91749975..91749987,-#_1141a9dcc077acd67e66fa22d837db11 | p11@CCDC88C |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:54855884..54855893,+#_1141a9dcc077acd67e66fa22d837db11 | p@chr2:54855884..54855893, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr14:91749975..91749987,-#_1141a9dcc077acd67e66fa22d837db11 | p11@CCDC88C |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:23621457..23621480,+#_1141a9dcc077acd67e66fa22d837db11 | p@chr11:23621457..23621480, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:52362879..52362884,+#_1141a9dcc077acd67e66fa22d837db11 | p@chr7:52362879..52362884, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:46921023..46921026,-#_1141a9dcc077acd67e66fa22d837db11 | p@chr7:46921023..46921026, - |
