UBERON:0010740: Difference between revisions
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|located_in= | |located_in= | ||
|name=bone of appendage girdle complex | |name=bone of appendage girdle complex | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0010707;;UBERON:0002091;;UBERON:0010707 | |part_of=UBERON:0010707;;UBERON:0002091;;UBERON:0010707 | ||
Latest revision as of 18:09, 12 September 2014
| Name: | bone of appendage girdle complex | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle)." [UBERON:cjm, UBERONREF:0000003] | ||
| Xrefs: |
| ||
| Synonyms: |
"bone of extended limb/fin region" RELATED [UBERON:cjm, UBERONREF:0000003] "limb bone" RELATED [MA:0000688, UBERONREF:0000003] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0010707(appendage girdle complex),UBERON:0002091(appendicular skeleton),UBERON:0010707(appendage girdle complex) |
Children
| is a: | UBERON:0004375 (bone of free limb or fin),UBERON:0010742 (bone of pelvic complex) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010740 (bone of appendage girdle complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_118a4dfeef9ccaaa1e0e605bfbdb669f | p26@Myo18a |
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_118a4dfeef9ccaaa1e0e605bfbdb669f | p26@Myo18a |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_6557989b84ab3988810e71156d7c1bcf | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_6557989b84ab3988810e71156d7c1bcf | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_6557989b84ab3988810e71156d7c1bcf | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_6557989b84ab3988810e71156d7c1bcf | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_6557989b84ab3988810e71156d7c1bcf | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_6557989b84ab3988810e71156d7c1bcf | p@chr8:75097542..75097549, + |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_0fa8366c9d37d4228f7d43cdcd483346 | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_0fa8366c9d37d4228f7d43cdcd483346 | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_bdb6f25981e136820e97180f47cd8cec | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_bdb6f25981e136820e97180f47cd8cec | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_8c893c305439f156640928f6ef2f7ff4 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_8c893c305439f156640928f6ef2f7ff4 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_8c893c305439f156640928f6ef2f7ff4 | p@chr16:24096441..24096449, + |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_a800dc891d37cce3d706ecb915001858 | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_a800dc891d37cce3d706ecb915001858 | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_3293cd5fe42ade831c74df891373a93c | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_3293cd5fe42ade831c74df891373a93c | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_b578ba7c58b9f0320c7e7db27641bd8c | p3@Asb16 |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_b578ba7c58b9f0320c7e7db27641bd8c | p3@Asb16 |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_4271b45bfdf99502011e74bc00c1e620 | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_4271b45bfdf99502011e74bc00c1e620 | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_d6378c51c3286214fa9147852794220c | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_d6378c51c3286214fa9147852794220c | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_17602a8b3e5727f334d704f7b08f8a7e | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_17602a8b3e5727f334d704f7b08f8a7e | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_a629d89887d5fffb036161a664372ca0 | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_a629d89887d5fffb036161a664372ca0 | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_79e6a7228ef4ff63eb1b12b58275038f | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_79e6a7228ef4ff63eb1b12b58275038f | p2@Oscar |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_79e6a7228ef4ff63eb1b12b58275038f | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_79e6a7228ef4ff63eb1b12b58275038f | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_01164108e8d93f5534acd639a768a499 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_01164108e8d93f5534acd639a768a499 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_01164108e8d93f5534acd639a768a499 | p4@Lipc |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_01164108e8d93f5534acd639a768a499 | p4@Lipc |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_169fe8f67d33919b4c4f1dc84378b142 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_169fe8f67d33919b4c4f1dc84378b142 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_558cb68cf900039aa0d96532ebde9a26 | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_558cb68cf900039aa0d96532ebde9a26 | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_558cb68cf900039aa0d96532ebde9a26 | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_558cb68cf900039aa0d96532ebde9a26 | p@chr18:76271498..76271508, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_a807fda2bd0be38f35e73339c83c8688 | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_a807fda2bd0be38f35e73339c83c8688 | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_7c392940e9ba21afd145c3051d7ba8e1 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_7c392940e9ba21afd145c3051d7ba8e1 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_7c392940e9ba21afd145c3051d7ba8e1 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_7c392940e9ba21afd145c3051d7ba8e1 | p@chr15:58649683..58649688, - |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_0edcdae520f7f8c748d4893a5dc2a105 | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_0edcdae520f7f8c748d4893a5dc2a105 | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_a773f825b6f578475ad9bedb1cc54049 | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_a773f825b6f578475ad9bedb1cc54049 | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_04a6d32be4c90f7904ca50d89509293a | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_04a6d32be4c90f7904ca50d89509293a | p2@Myh4 |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_7f5f478f39a286cd20d0abdc1ba59150 | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_7f5f478f39a286cd20d0abdc1ba59150 | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_48c34d838d521a0379fce2b06853af4f | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_48c34d838d521a0379fce2b06853af4f | p1@Msmp |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_48c34d838d521a0379fce2b06853af4f | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_48c34d838d521a0379fce2b06853af4f | p1@Msmp |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_3e7ec4c2f678f89aa9b5a821bb19f419 | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_3e7ec4c2f678f89aa9b5a821bb19f419 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_3e7ec4c2f678f89aa9b5a821bb19f419 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_3e7ec4c2f678f89aa9b5a821bb19f419 | p@chrY:2858251..2858257, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_e86a9542a542e3f1146d341399a1d925 | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_e86a9542a542e3f1146d341399a1d925 | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_1c956ac064483de39deb42694ba9accb | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_1c956ac064483de39deb42694ba9accb | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_5a97fe5141ed1d5e741104a10efbafc7 | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_5a97fe5141ed1d5e741104a10efbafc7 | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_98a6c1fbeb9599bde5577104a9613df3 | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_98a6c1fbeb9599bde5577104a9613df3 | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_cd4db17d5b0e9d10cd05f3a9e0533f83 | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_cd4db17d5b0e9d10cd05f3a9e0533f83 | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_cc09a6361493b6f8d281eb90675b8705 | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_cc09a6361493b6f8d281eb90675b8705 | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_3e6fcbdedaa492f40b408024235897f5 | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_3e6fcbdedaa492f40b408024235897f5 | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_3e6fcbdedaa492f40b408024235897f5 | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_3e6fcbdedaa492f40b408024235897f5 | p@chr7:133592162..133592188, - |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_1cb277bf50549ce416c8ebc4867420c3 | p4@Sgca |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_1cb277bf50549ce416c8ebc4867420c3 | p4@Sgca |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_b65e47e05b57836aa13e20024ce4b536 | p1@Mepe |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_b65e47e05b57836aa13e20024ce4b536 | p1@Mepe |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_b0d550dec5811a99cdff277ecf951937 | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_b0d550dec5811a99cdff277ecf951937 | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_b0d550dec5811a99cdff277ecf951937 | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_b0d550dec5811a99cdff277ecf951937 | p@chr12:81581216..81581231, + |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_c744b0f03ce1c97d9c07f7fbf261d599 | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_c744b0f03ce1c97d9c07f7fbf261d599 | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_c744b0f03ce1c97d9c07f7fbf261d599 | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_c744b0f03ce1c97d9c07f7fbf261d599 | p5@Col11a2 |
| 1.36e-25 | FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_b812f7d0a5e14c35d88259aab0b3d4e7 | p@chr2:180890942..180890956, - |
| 1.36e-25 | FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_b812f7d0a5e14c35d88259aab0b3d4e7 | p2@Siglec15 |
