FFCP PHASE2:Hg19::chr12:123201337..123201364,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8843 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16824 |TSSclas...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16824 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PI97,P49019 | ||
|association_with_transcript=74bp_to_ENST00000528880,NM_006018,uc001ucy.3_5end | |association_with_transcript=74bp_to_ENST00000528880,NM_006018,uc001ucy.3_5end | ||
|cluster_id=chr12:123201337..123201364,- | |cluster_id=chr12:123201337..123201364,- | ||
Latest revision as of 00:28, 17 September 2015
| Short description: | p1@HCAR3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HCAR3_5end |
| Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
| Association with transcript: | 74bp_to_ENST00000528880, NM_006018, uc001ucy.3_5end |
| EntrezGene: | HCAR3 |
| HGNC: | 16824 |
| UniProt: | E9PI97P49019 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HCAR3 |
|---|
0
500
1000
1500
2000
2500
3000
3500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 7.66e-50 | 42 |
| CD14-positive, CD16-negative classical monocyte | 7.66e-50 | 42 |
| myeloid leukocyte | 6.89e-44 | 72 |
| defensive cell | 1.69e-43 | 48 |
| phagocyte | 1.69e-43 | 48 |
| macrophage dendritic cell progenitor | 3.24e-40 | 61 |
| monopoietic cell | 5.43e-38 | 59 |
| monocyte | 5.43e-38 | 59 |
| monoblast | 5.43e-38 | 59 |
| promonocyte | 5.43e-38 | 59 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.10e-41 | 98 |
| blood island | 1.10e-41 | 98 |
| hemolymphoid system | 3.49e-38 | 108 |
| bone marrow | 3.18e-32 | 76 |
| immune system | 9.22e-29 | 93 |
| bone element | 1.74e-28 | 82 |
| skeletal element | 1.94e-27 | 90 |
| skeletal system | 8.64e-23 | 100 |
| lateral plate mesoderm | 1.84e-11 | 203 |
| blood | 1.11e-10 | 15 |
Showing 1 to 10 of 13 entries
