FFCP PHASE1:Mm9::chr17:26078871..26078926,-: Difference between revisions

Latest revision as of 02:39, 26 September 2015

Short description:	p1@Pigq
Species:	Mouse (Mus musculus)
DPI dataset:	NA
TSS-like-by-RIKEN-classifier(Yes/No):	NA
DHS support(Yes/No):	NA
Description:	CAGE_peak_1_at_Pigq_5end
Coexpression cluster:	MCL_coexpression_mm9:347
Association with transcript:	0bp_to_ENSMUST00000097368, ENSMUST00000124032, ENSMUST00000139226, ENSMUST00000140304, NM_011822, uc008bcp.1, uc008bcr.1, uc008bct.1, uc012ano.1_5end
EntrezGene:	Pigq
Link to Zenbu:	ZENBU

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CAGE Expression

Sample	p1@Pigq
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	22.90
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	31.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	31.39
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	49.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	48.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	23.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	19.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	13.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	5.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	7.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	14.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	15.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	12.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	18.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	10.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	8.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	6.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	13.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	17.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	14.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	33.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	16.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	17.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	17.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	21.11
GP2+ M cell, pool1.CNhs13228.11845-124H9	24.69
GP2+ M cell, pool2.CNhs13231.11846-124I1	29.72
GP2+ M cell, pool3.CNhs13240.11847-124I2	17.67
Ileum epithelium, pool1.CNhs13199.10252-104B9	22.23
Ileum epithelium, pool2.CNhs13232.10253-104C1	32.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	19.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	13.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	12.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	22.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	22.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	24.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	7.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	7.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	9.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	7.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	5.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	7.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	16.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	16.83
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	19.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	41.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	35.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	55.80
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	45.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	32.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	48.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	12.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	10.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	15.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	21.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	23.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	17.53
Mouse Granule cells, donor1.CNhs12131.11713-123C3	28.73
Mouse Granule cells, donor2.CNhs12357.11731-123E3	29.09
Mouse Granule cells, donor3.CNhs12108.11636-122C7	25.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	16.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	25.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	31.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	41.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	42.63
Mouse Microglia, donor1.CNhs12629.11718-123C8	49.43
Mouse Microglia, donor2.CNhs12634.11736-123E8	80.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	19.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	16.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	16.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	59.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	64.05
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	15.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	13.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	18.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	70.47
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	57.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	52.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	26.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	21.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	27.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	62.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	40.52
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	47.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	44.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	46.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	26.28
Mouse Schwann, donor1.CNhs12507.11728-123D9	19.69
Mouse Schwann, donor2.CNhs12573.11746-123F9	29.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	29.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	27.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	11.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	32.92
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	42.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	27.33
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	25.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	15.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	18.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	19.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	29.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	26.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	22.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	21.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	19.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	15.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	20.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	30.60
accessory axillary lymph node, adult.CNhs10475.1063-29H9	11.91
adrenal gland, adult.CNhs10508.49-24D7	27.61
adrenal gland, embryo E14.CNhs11038.406-44C5	16.48
adrenal gland, embryo E16.CNhs11004.1254-43D6	10.35
adrenal gland, embryo E17.CNhs11043.1263-45I1	23.29
adrenal gland, embryo E18.CNhs11026.1262-18F5	17.03
adrenal gland, neonate N00.CNhs11191.1311-23C1	17.05
adrenal gland, neonate N25.CNhs11223.1377-27I3	43.48
amnion, adult pregnant day17.5.CNhs10488.583-22A8	15.82
aorta, adult.CNhs10498.46-23H1	37.60
bone (os femoris), adult.CNhs10483.56-12G2	17.69
bone (os femoris), neonate N02.CNhs11227.1985-43F5	20.87
bone (os femoris), neonate N16.CNhs11225.1525-43A6	16.12
bone (os femoris), neonate N20.CNhs11195.1350-25C3	8.73
cecum, adult.CNhs10467.37-13H4	7.46
cerebellum, adult.CNhs10494.15-8B2	39.23
cerebellum, neonate N30.CNhs11135.1395-42I2	40.84
colon, adult.CNhs10468.36-18H7	21.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	10.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	6.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	10.80
corpora quadrigemina, adult.CNhs10501.16-22A4	38.35
corpus striatum, adult.CNhs10487.19-21D8	26.99
corpus striatum, neonate N00.CNhs11226.630-43F1	16.21
cortex, adult.CNhs10473.12-14D5	41.72
cortex, neonate N30.CNhs11107.1392-42F2	33.75
diencephalon, adult.CNhs10482.20-12F2	39.90
diencephalon, neonate N30.CNhs11201.1388-42B2	38.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	19.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	17.91
epididymis, adult.CNhs10490.58-23B2	21.99
eyeball, adult.CNhs10484.31-12G4	71.34
eyeball, embryo E12.CNhs11016.345-16C6	13.92
eyeball, embryo E14.CNhs10521.399-16E2	15.86
eyeball, embryo E15.CNhs10593.426-16C9	16.39
eyeball, embryo E17.CNhs11023.1261-18D4	17.03
eyeball, neonate N00.CNhs11207.633-15C6	17.21
eyeball, neonate N01.CNhs11140.1532-43E7	16.27
eyeball, neonate N02.CNhs11205.1551-44G8	20.71
eyeball, neonate N16.CNhs11188.777-19A2	31.30
forelimb, embryo E11.CNhs10596.335-25E2	13.37
forelimb, embryo E12.CNhs10600.359-14H2	14.94
forelimb, embryo E13.CNhs10589.384-1E2	13.20
forelimb, embryo E14.CNhs10577.413-26A8	11.62
forelimb, embryo E15.CNhs11007.437-20E7	11.96
forelimb, embryo E17.CNhs10598.1517-43C4	17.41
forelimb, embryo E18.CNhs11008.1520-43B5	9.88
gonad, embryo E13.CNhs11044.1564-45I6	12.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	9.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	6.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	14.49
heart, embryo E11.CNhs10586.331-24E9	20.71
heart, embryo E12.CNhs11015.353-12F5	20.64
heart, embryo E13.CNhs11013.376-3I9	20.53
heart, embryo E14.CNhs10597.403-26D4	26.99
heart, embryo E15.CNhs11017.431-16C8	24.99
heart, embryo E16.CNhs11021.457-17C6	19.90
heart, embryo E17.CNhs11025.479-18E5	25.35
heart, embryo E18.CNhs11030.1283-20G3	27.90
heart, neonate N00.CNhs11213.639-21E3	24.05
heart, neonate N03.CNhs11221.1349-25I2	34.72
heart, neonate N10.CNhs11118.749-24G1	23.80
heart, neonate N16.CNhs11209.782-15G1	28.54
heart, neonate N20.CNhs11127.821-26I6	22.22
heart, neonate N25.CNhs11196.1351-25D3	27.66
heart, neonate N30.CNhs11202.1390-42D2	24.29
hippocampus, adult.CNhs10478.13-16E8	41.22
hippocampus, neonate N00.CNhs11228.627-43G1	20.07
intestinal mucosa, adult.CNhs10506.860-29I3	31.39
intestine, adult.CNhs10496.178-9A3	28.83
intestine, embryo E12.CNhs11019.1251-16I5	13.86
intestine, embryo E13.CNhs11010.381-16D5	14.40
intestine, embryo E15.CNhs10602.976-16D8	18.69
intestine, embryo E16.CNhs10585.463-22H4	18.55
intestine, embryo E17.CNhs10582.482-18D3	19.12
intestine, embryo E18.CNhs10526.1289-20F7	21.50
intestine, neonate N00.CNhs11126.644-26D1	29.90
intestine, neonate N01.CNhs11192.1322-23E9	19.60
intestine, neonate N06.CNhs11102.688-20B8	17.84
intestine, neonate N07.CNhs11095.720-20F2	22.08
intestine, neonate N10.CNhs11098.755-23A5	20.67
intestine, neonate N20.CNhs11187.827-18D1	30.56
intestine, neonate N25.CNhs11121.1352-25E3	19.67
intestine, neonate N30.CNhs11131.1384-42G1	24.10
kidney, embryo E14.CNhs10606.411-4I9	17.26
kidney, embryo E15.CNhs10997.434-16F8	15.31
kidney, embryo E16.CNhs10584.464-22A5	22.54
kidney, embryo E17.CNhs11028.483-18I2	21.38
kidney, embryo E18.CNhs11001.1288-20C7	22.50
kidney, neonate N00.CNhs11214.646-21G7	27.28
kidney, neonate N10.CNhs11206.758-6D5	39.21
kidney, neonate N20.CNhs11113.832-19I1	47.38
kidney, neonate N25.CNhs11122.1353-25F3	48.83
kidney, neonate N30.CNhs11203.1385-42H1	50.84
liver, adult pregnant day01.CNhs10466.508-5B2	21.64
liver, embryo E12.CNhs10601.355-15F8	10.68
liver, embryo E13.CNhs10524.378-3H6	11.40
liver, embryo E14.CNhs10594.409-16E1	8.99
liver, embryo E15.CNhs10520.433-16D7	10.75
liver, embryo E16.CNhs10523.462-17F5	11.58
liver, embryo E17.CNhs10510.481-18A3	8.40
liver, embryo E18.CNhs10579.499-43G4	9.78
liver, neonate N00.CNhs11117.641-24F4	13.94
liver, neonate N03.CNhs11123.1345-25G2	14.55
liver, neonate N06.CNhs11101.684-20A8	11.50
liver, neonate N07.CNhs11103.716-20H2	16.37
liver, neonate N10.CNhs11115.751-24B9	19.97
liver, neonate N20.CNhs11220.823-25A3	21.72
liver, neonate N25.CNhs11198.1368-26H1	26.19
liver, neonate N30.CNhs11106.1382-42D1	23.64
lung, adult.CNhs10474.28-22B1	24.57
lung, embryo E12.CNhs10522.354-16G2	16.49
lung, embryo E14.CNhs10604.404-26F8	19.07
lung, embryo E15.CNhs11020.432-17C5	15.96
lung, embryo E16.CNhs10998.458-17B6	12.44
lung, embryo E17.CNhs10605.480-44A6	19.93
lung, embryo E18.CNhs10583.1287-20I6	22.85
lung, neonate N00.CNhs11224.640-42C6	20.88
lung, neonate N06.CNhs11212.683-20E5	22.07
lung, neonate N07.CNhs11111.715-19A3	21.26
lung, neonate N10.CNhs11219.750-23E6	31.25
lung, neonate N20.CNhs11109.822-18A4	19.83
lung, neonate N25.CNhs11119.1359-25C7	26.77
lung, neonate N30.CNhs11133.1394-42H2	22.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	19.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	22.84
mammary gland, adult lactating day02.CNhs10480.595-22B6	38.85
mammary gland, adult pregnant day19.CNhs10476.588-5H2	27.04
medulla oblongata, adult.CNhs10477.17-12C2	39.82
medulla oblongata, neonate N30.CNhs11200.1396-42A3	52.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	12.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	13.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	24.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	21.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	20.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	24.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	18.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	24.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	23.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	19.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	18.18
olfactory brain, adult.CNhs10489.18-22I9	36.31
ovary, adult.CNhs10507.91-2I7	23.70
ovary, embryo E18.CNhs11040.505-44H7	17.98
ovary, neonate N00.CNhs11217.1299-22I4	14.99
oviduct, adult pregnant day01.CNhs10500.988-6G6	24.25
pancreas, adult.CNhs10486.34-16E4	43.81
pancreas, embryo E14.CNhs11012.405-44F4	15.30
pancreas, embryo E15.CNhs11042.1556-45F2	18.44
pancreas, embryo E16.CNhs11003.460-26E5	18.86
pancreas, embryo E17.CNhs10599.1558-45G3	27.76
pancreas, embryo E18.CNhs10580.1535-43I7	23.98
pancreas, neonate N00.CNhs11105.645-26G9	18.35
pancreas, neonate N01.CNhs11138.1531-43D7	20.36
pancreas, neonate N02.CNhs11139.1539-43D8	18.89
pancreas, neonate N16.CNhs11136.787-43B6	23.07
pancreas, neonate N25.CNhs11094.1555-45E2	35.84
pancreas, neonate N30.CNhs11182.1548-44H5	36.10
pituitary gland, adult.CNhs10493.21-1G8	22.13
pituitary gland, embryo E12.CNhs11018.346-16E6	10.26
pituitary gland, embryo E13.CNhs11009.370-44C7	15.01
pituitary gland, embryo E14.CNhs11037.398-44A5	17.15
pituitary gland, embryo E15.CNhs10592.427-16B9	24.47
pituitary gland, embryo E16.CNhs11036.449-43F6	21.58
pituitary gland, embryo E17.CNhs11039.1265-44F5	18.92
pituitary gland, neonate N00.CNhs11190.1308-22E9	28.01
placenta, adult pregnant day10.CNhs10472.539-13I7	19.01
placenta, adult pregnant day17.CNhs10464.577-18G3	15.04
prostate, adult.CNhs10470.859-1F8	23.38
skin, adult.CNhs10492.30-1C3	19.79
skin, neonate N00.CNhs11124.650-25G4	8.23
skin, neonate N03.CNhs11215.662-22H3	21.59
skin, neonate N06.CNhs11097.693-20I5	21.85
skin, neonate N10.CNhs11108.762-6C4	20.19
small intestine, neonate N16.CNhs11114.790-21I1	23.61
spinal cord, adult.CNhs10505.24-13C9	50.81
spleen, adult.CNhs10465.25-2G2	9.06
spleen, embryo E16.CNhs11035.461-43C1	17.34
spleen, embryo E18.CNhs11011.1271-21F2	11.67
spleen, neonate N10.CNhs11116.752-24D1	8.29
spleen, neonate N20.CNhs11112.824-19H1	8.48
spleen, neonate N25.CNhs11099.1354-25G3	8.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	14.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	13.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	15.62
stomach, adult.CNhs10503.33-1H6	31.50
stomach, embryo E12.CNhs10588.356-43E3	12.18
stomach, embryo E15.CNhs10603.1252-16G8	19.72
stomach, embryo E16.CNhs11022.459-17D4	15.44
stomach, embryo E17.CNhs11006.1035-18D5	12.96
stomach, embryo E18.CNhs10999.1286-20C6	12.67
stomach, neonate N03.CNhs11193.1340-24B8	19.96
stomach, neonate N07.CNhs11210.718-18A9	22.48
stomach, neonate N25.CNhs11104.1355-25E4	25.65
stomach, neonate N30.CNhs11134.1386-42I1	21.39
submandibular gland, adult.CNhs10469.59-29C1	31.07
testis, adult.CNhs10504.57-7G5	6.76
testis, embryo E13.CNhs11031.389-23F5	14.80
testis, embryo E15.CNhs11034.443-27C5	15.88
testis, embryo E16.CNhs11033.470-26G5	17.31
testis, embryo E17.CNhs11029.486-18I5	11.62
testis, embryo E18.CNhs11027.503-18G5	14.02
testis, neonate N00.CNhs11189.1300-22B7	15.37
testis, neonate N07.CNhs11222.726-26I4	21.74
testis, neonate N10.CNhs11204.763-44D9	15.62
testis, neonate N20.CNhs11110.839-18H3	11.84
testis, neonate N30.CNhs11130.1391-42E2	10.08
thymus, adult.CNhs10471.38-12B5	12.64
thymus, embryo E14.CNhs11041.402-44I4	15.00
thymus, embryo E15.CNhs11005.430-45I2	13.25
thymus, embryo E16.CNhs11002.456-26C5	13.77
thymus, embryo E17.CNhs10581.478-18C1	14.14
thymus, embryo E18.CNhs10595.1273-19G4	15.10
thymus, neonate N02.CNhs11181.1541-43F8	16.11
thymus, neonate N03.CNhs11137.2104-43C7	11.08
thymus, neonate N06.CNhs11197.681-26C4	12.92
thymus, neonate N07.CNhs11211.713-19D3	13.87
thymus, neonate N10.CNhs11194.748-24E4	13.61
thymus, neonate N20.CNhs11186.820-7A2	14.13
thymus, neonate N25.CNhs11125.1362-25G7	12.70
thymus, neonate N30.CNhs11132.1393-42G2	12.04
tongue, adult.CNhs10499.32-1B4	23.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	11.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	20.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	11.75
urinary bladder, adult.CNhs10481.879-12E4	20.67
uterus, adult pregnant day19.CNhs10497.590-15F5	25.71
uterus, adult.CNhs10509.92-27E5	21.80
vagina, adult.CNhs10502.89-27D5	17.36
vesicular gland, adult.CNhs10491.51-27F8	35.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	52.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	47.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	48.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	68.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	45.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	38.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	36.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	37.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	40.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	38.83
whole body, embryo E11.CNhs11014.324-5I8	9.24
whole body, embryo E12.CNhs10587.857-27C9	13.17
whole body, embryo E13.CNhs10512.372-23H2	13.49
whole body, embryo E14.5.CNhs10578.420-27D2	18.48
whole body, embryo E14.CNhs10519.395-14B1	13.83
whole body, embryo E16.CNhs10514.453-14F2	17.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	23.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	18.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	17.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	17.44
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	18.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	18.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	21.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	23.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	21.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	21.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	23.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	17.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	17.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	12.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	16.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	20.51
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	16.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	17.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	19.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	17.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	19.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	17.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	16.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	18.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	24.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	15.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	22.78
whole body, embryo E17.5.CNhs10513.490-9F9	20.83
whole body, embryo E17.CNhs10517.475-3I5	18.74
whole body, embryo E18.CNhs10516.493-3B3	17.78
whole body, neonate N00.CNhs10525.657-19C2	22.56
whole body, neonate N01.CNhs10576.659-23C6	14.16
whole body, neonate N06.CNhs10515.692-21D1	21.62
whole body, neonate N10.CNhs10518.761-6B4	22.03

Click each plot point to find sample in table

Ontology-based sample term enrichment analysisSummary:This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space Analyst: Hideya Kawaji link to source dataset data

Cell type
Ontology term	p-value	n
embryonic cell	3.48e-10	70
ectodermal cell	5.52e-09	44
neurectodermal cell	5.52e-09	44
neural cell	1.07e-08	43

Uber anatomy
Ontology term	p-value	n
nervous system	4.90e-17	75
central nervous system	7.46e-17	73
ectoderm-derived structure	1.37e-15	95
ectoderm	1.37e-15	95
presumptive ectoderm	1.37e-15	95
regional part of nervous system	5.65e-13	54
structure with developmental contribution from neural crest	3.71e-12	92
neural tube	8.91e-12	52
neural rod	8.91e-12	52
future spinal cord	8.91e-12	52
neural keel	8.91e-12	52
ecto-epithelium	2.08e-10	73
neurectoderm	3.62e-10	64
neural plate	3.62e-10	64
presumptive neural plate	3.62e-10	64
anatomical conduit	8.70e-10	122
brain	2.62e-09	47
future brain	2.62e-09	47
regional part of brain	6.25e-09	46
gray matter	7.89e-09	34
tube	1.14e-08	114
posterior neural tube	1.77e-07	12
chordal neural plate	1.77e-07	12

@@ Line 1: / Line 1: @@
 {{FFCP
-|id=chr17:26078871..26078926,-
+|DHSsupport=NA
-|short_description=p1@Pigq
+|DPIdataset=NA
-|description=CAGE_peak_1_at_Pigq_5end
-|association_with_transcript=0bp_to_ENSMUST00000097368,ENSMUST00000124032,ENSMUST00000139226,ENSMUST00000140304,NM_011822,uc008bcp.1,uc008bcr.1,uc008bct.1,uc012ano.1_5end
 |EntrezGene=14755
 |HGNC=
+|MCL_coexpression_id=347
+|TSSclassifier=NA
 |UniProt=Q3TD14,D3Z0A4,Q3TF56,Q9QYT7
+|association_with_transcript=0bp_to_ENSMUST00000097368,ENSMUST00000124032,ENSMUST00000139226,ENSMUST00000140304,NM_011822,uc008bcp.1,uc008bcr.1,uc008bct.1,uc012ano.1_5end
+|cluster_id=chr17:26078871..26078926,-
+|description=CAGE_peak_1_at_Pigq_5end
+|id=chr17:26078871..26078926,-
+|ontology_enrichment_celltype=CL:0002321!3.48e-10!70;CL:0000220!3.48e-10!70;CL:0000221!5.52e-09!44;CL:0000133!5.52e-09!44;CL:0002319!1.07e-08!43;CL:0000055!7.95e-08!50
+|ontology_enrichment_celltype_v019_2=CL:0002321,3.48e-10,70;CL:0000221,5.52e-09,44;CL:0000133,5.52e-09,44;CL:0002319,1.07e-08,43
+|ontology_enrichment_disease=
+|ontology_enrichment_disease_v019_2=
+|ontology_enrichment_uberon=UBERON:0000073!4.90e-17!75;UBERON:0001016!4.90e-17!75;UBERON:0001017!7.46e-17!73;UBERON:0005743!7.46e-17!73;UBERON:0004121!6.65e-15!102;UBERON:0000924!6.65e-15!102;UBERON:0006601!6.65e-15!102;UBERON:0001049!8.91e-12!52;UBERON:0005068!8.91e-12!52;UBERON:0006241!8.91e-12!52;UBERON:0007135!8.91e-12!52;UBERON:0000955!5.83e-11!50;UBERON:0006238!5.83e-11!50;UBERON:0002616!1.45e-10!49;UBERON:0000033!3.76e-10!63;UBERON:0004111!8.70e-10!122;UBERON:0002346!1.86e-09!71;UBERON:0003075!1.86e-09!71;UBERON:0007284!1.86e-09!71;UBERON:0002020!7.89e-09!34;UBERON:0000025!1.14e-08!114;UBERON:0003076!1.77e-07!12;UBERON:0003057!1.77e-07!12;UBERON:0000480!6.81e-07!308;UBERON:0000467!6.81e-07!308
+|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.90e-17,75;UBERON:0001017,7.46e-17,73;UBERON:0004121,1.37e-15,95;UBERON:0000924,1.37e-15,95;UBERON:0006601,1.37e-15,95;UBERON:0000073,5.65e-13,54;UBERON:0010314,3.71e-12,92;UBERON:0001049,8.91e-12,52;UBERON:0005068,8.91e-12,52;UBERON:0006241,8.91e-12,52;UBERON:0007135,8.91e-12,52;UBERON:0010371,2.08e-10,73;UBERON:0002346,3.62e-10,64;UBERON:0003075,3.62e-10,64;UBERON:0007284,3.62e-10,64;UBERON:0004111,8.70e-10,122;UBERON:0000955,2.62e-09,47;UBERON:0006238,2.62e-09,47;UBERON:0002616,6.25e-09,46;UBERON:0002020,7.89e-09,34;UBERON:0000025,1.14e-08,114;UBERON:0003076,1.77e-07,12;UBERON:0003057,1.77e-07,12
 |phase1_expression=22.9012851359855,31.7567620951819,31.394947517878,48.9992022317065,48.5868858047957,23.1673395238408,19.6234618100242,13.4288256379239,5.06839399746,7.95819389494778,14.7247452673934,15.6353431630859,12.6688540149092,18.2708641055705,10.9926221399169,8.09901069559304,6.29605690315332,13.249410945046,17.2764186343231,14.004858509335,33.2519264490683,16.8794617041505,17.5003858723087,17.9191513528615,21.1056538581796,24.6919744569459,29.7225777349762,17.6686410802429,22.2327400763957,32.5118867390311,19.5122849376668,13.3356441426523,12.916360539276,0,22.8192779603507,22.275442478038,24.0919840389596,7.11503772252743,7.813353445238,9.94695113550217,7.64700934440319,5.46436387966757,7.76816564849846,16.1147927008739,16.8285705824394,19.2724089769766,41.4667412504461,35.9741508027737,55.8002904145558,45.6910262824566,32.3368633954587,48.8758718840903,12.5836954543302,10.1550699881588,15.7964085596958,21.0952737549477,23.4957420749781,17.532851137433,28.7289374420629,29.0945038599618,25.9870875437533,16.9422266034566,25.789549087223,31.496490104849,41.5323872278129,42.628806896766,49.4340182355368,80.3016258122049,19.2862678893768,16.8757422914613,16.6156719467592,59.7010557403949,64.0518768759679,15.6788222995141,13.5142114135713,18.3843757322004,70.4741638396088,57.9700514906752,52.2262213071228,26.7729164092293,21.3166209593614,27.6084086395083,62.257808777308,40.518907922281,47.5202550585879,44.1942878210502,46.2707962597085,26.2823218613674,19.6888102666279,29.8507662421803,29.5661778475711,27.5335640634044,11.5595126730318,32.9218946899068,42.2354671340985,27.3296401129375,24.9991067834518,15.3387290320252,18.9643783360094,19.7870161725791,29.2954313135495,26.9485602570067,22.9324715735981,21.3320010945999,19.0512116089868,15.9616715249312,20.2209778005913,30.6012797647081,11.9111426477699,27.6102378660574,16.4811060427829,10.3518262626128,23.2921652228619,17.0316583824463,17.0503625346772,43.4806406000677,15.8204779349999,37.595832799177,17.6922110389975,20.8679236432158,16.1214308476087,8.727754556434,7.45567044872489,39.2326267995473,40.8421078286237,21.4583926375217,10.6635460810269,5.99902730993408,10.8009693012105,38.3464036876346,26.992535566299,16.2094114225595,41.7178368461464,33.7544403676036,39.8953045554355,38.6134206101263,19.4513184954104,17.9146037678534,21.9868799837297,71.3397891455147,13.9228873970093,15.8632452059096,16.3856538122868,17.0296444154358,17.2132342852859,16.2704424761759,20.7080811277001,31.3031078594209,13.3652155618362,14.9393803332577,13.1963343122962,11.6173738186615,11.9560317167007,17.4126083261083,9.87754254758129,12.1410902759281,9.12877143507205,6.94839349209731,14.4923384691752,20.7125772535502,20.6382932783365,20.5270750065557,26.988899856714,24.9890574319203,19.9004575624718,25.3461999777945,27.9004337455604,24.0536605276369,34.7221283317444,23.8042822914688,28.5362209601412,22.2223980886505,27.6633145266724,24.2913617956273,41.2168299185689,20.0663994139605,31.3897843834608,28.8251117663263,13.8637362847902,14.3986736553472,18.6857818917035,18.5548842653475,19.1245117706588,21.4954957507192,29.8953308773042,19.5991756121573,17.8447998248191,22.0841683965677,20.6661932346267,30.5598598942435,19.6685625385972,24.0960940637784,17.2597789867304,15.3093006897037,22.5415471346161,21.383389423758,22.4984885114446,27.2828339373339,39.2066530170395,47.3828575014523,48.8266043586676,50.8396315357818,21.6410417773619,10.67808676583,11.4004217165658,8.99448449539415,10.7515864335907,11.576503668116,8.40265310878685,9.78166867332756,13.943629502653,14.5517548989683,11.5014565221884,16.3742016974142,19.9704110793319,21.7217835034516,26.1920223741992,23.639732546805,24.5721742921584,16.4857528240322,19.066902243717,15.9560380628677,12.4385831592906,19.9332446355761,22.8521895250573,20.8793003207845,22.0689201748667,21.2606102062824,31.2531346568675,19.8274610806043,26.7661721892138,22.5652531387158,19.6028669121054,22.8440387203858,38.8493775685039,27.0418011378638,39.8165463169724,52.8624706530836,12.9508606847574,13.6334300690361,24.609641114468,21.0836921920185,20.4652227846159,24.3748173911603,18.7150886229211,24.0615051170508,23.074209995469,19.5811424800579,18.1832377855401,36.3093087556642,23.7039942297809,17.9846259703928,14.985600260529,24.2506080769627,43.8058956521877,15.2951800777638,18.4417369748498,18.8605079755898,27.7583779307926,23.9799415396263,18.3484088149437,20.3578888507403,18.8943610543902,23.0706833293146,35.8423269154996,36.0974401368654,22.1285743739962,10.2634823597847,15.0056073187995,17.1469628025274,24.4729522426338,21.5826269298505,18.9231373692439,28.0107753185431,19.0084083531605,15.0400770313312,23.376010193826,19.7863503529776,8.23468576149118,21.5920271242798,21.845138952574,20.1893306686425,23.6099477670179,50.8065327508797,9.05615668228619,17.3364969089107,11.6672552242918,8.2882121082064,8.47504211870356,8.23601423543482,14.9581018394593,13.0154850661002,15.6165970398999,31.5041303944987,12.1789357528737,19.72198831130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+|short_description=p1@Pigq
 }}

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Latest revision as of 02:39, 26 September 2015

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0