FFCP PHASE1:Mm9::chr17:35258131..35258142,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:35258131..35258142,-
|short_description=p3@Csnk2b
|description=CAGE_peak_3_at_Csnk2b_5end
|association_with_transcript=-13bp_to_ENSMUST00000174024_5end
|...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13001 | |EntrezGene=13001 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3UZX4 | |UniProt=G3UZX4 | ||
|association_with_transcript=-13bp_to_ENSMUST00000174024_5end | |||
|cluster_id=chr17:35258131..35258142,- | |||
|description=CAGE_peak_3_at_Csnk2b_5end | |||
|id=chr17:35258131..35258142,- | |||
|ontology_enrichment_celltype=CL:0000540!5.18e-10!33;CL:0000047!5.18e-10!33;CL:0000031!5.18e-10!33;CL:0000404!5.18e-10!33;CL:0000221!1.01e-08!44;CL:0000133!1.01e-08!44;CL:0002319!1.53e-08!43;CL:0000393!2.59e-08!39;CL:0000211!2.59e-08!39;CL:0000055!6.84e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.11e-10,33;CL:0000047,5.11e-10,33;CL:0000031,5.11e-10,33;CL:0000404,5.11e-10,33;CL:0000221,9.99e-09,44;CL:0000133,9.99e-09,44;CL:0002319,1.52e-08,43;CL:0000393,2.56e-08,39;CL:0000211,2.56e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.09e-16!75;UBERON:0001016!2.09e-16!75;UBERON:0001017!2.52e-16!73;UBERON:0005743!2.52e-16!73;UBERON:0004121!3.87e-15!102;UBERON:0000924!3.87e-15!102;UBERON:0006601!3.87e-15!102;UBERON:0002346!1.32e-11!71;UBERON:0003075!1.32e-11!71;UBERON:0007284!1.32e-11!71;UBERON:0001049!1.60e-11!52;UBERON:0005068!1.60e-11!52;UBERON:0006241!1.60e-11!52;UBERON:0007135!1.60e-11!52;UBERON:0003080!2.52e-09!40;UBERON:0002780!3.55e-09!39;UBERON:0001890!3.55e-09!39;UBERON:0006240!3.55e-09!39;UBERON:0003056!4.55e-09!49;UBERON:0002020!4.76e-09!34;UBERON:0002616!9.69e-09!49;UBERON:0000033!1.09e-08!63;UBERON:0000955!1.45e-08!50;UBERON:0006238!1.45e-08!50;UBERON:0000153!7.17e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.04e-16,75;UBERON:0001017,2.46e-16,73;UBERON:0004121,5.55e-16,95;UBERON:0000924,5.55e-16,95;UBERON:0006601,5.55e-16,95;UBERON:0010371,9.69e-13,73;UBERON:0002346,1.04e-12,64;UBERON:0003075,1.04e-12,64;UBERON:0007284,1.04e-12,64;UBERON:0001049,1.58e-11,52;UBERON:0005068,1.58e-11,52;UBERON:0006241,1.58e-11,52;UBERON:0007135,1.58e-11,52;UBERON:0000073,2.88e-11,54;UBERON:0003080,2.49e-09,40;UBERON:0002780,3.50e-09,39;UBERON:0001890,3.50e-09,39;UBERON:0006240,3.50e-09,39;UBERON:0003056,4.46e-09,49;UBERON:0002020,4.70e-09,34;UBERON:0010314,1.14e-08,92;UBERON:0002616,1.44e-08,46;UBERON:0000955,2.19e-08,47;UBERON:0006238,2.19e-08,47 | |||
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| ||
|short_description=p3@Csnk2b | |||
}} | }} |
Latest revision as of 09:30, 26 September 2015
Short description: | p3@Csnk2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Csnk2b_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENSMUST00000174024_5end |
EntrezGene: | Csnk2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.11e-10 | 33 |
neuronal stem cell | 5.11e-10 | 33 |
neuroblast | 5.11e-10 | 33 |
electrically signaling cell | 5.11e-10 | 33 |
ectodermal cell | 9.99e-09 | 44 |
neurectodermal cell | 9.99e-09 | 44 |
neural cell | 1.52e-08 | 43 |
electrically responsive cell | 2.56e-08 | 39 |
electrically active cell | 2.56e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.04e-16 | 75 |
central nervous system | 2.46e-16 | 73 |
ectoderm-derived structure | 5.55e-16 | 95 |
ectoderm | 5.55e-16 | 95 |
presumptive ectoderm | 5.55e-16 | 95 |
ecto-epithelium | 9.69e-13 | 73 |
neurectoderm | 1.04e-12 | 64 |
neural plate | 1.04e-12 | 64 |
presumptive neural plate | 1.04e-12 | 64 |
neural tube | 1.58e-11 | 52 |
neural rod | 1.58e-11 | 52 |
future spinal cord | 1.58e-11 | 52 |
neural keel | 1.58e-11 | 52 |
regional part of nervous system | 2.88e-11 | 54 |
anterior neural tube | 2.49e-09 | 40 |
regional part of forebrain | 3.50e-09 | 39 |
forebrain | 3.50e-09 | 39 |
future forebrain | 3.50e-09 | 39 |
pre-chordal neural plate | 4.46e-09 | 49 |
gray matter | 4.70e-09 | 34 |
structure with developmental contribution from neural crest | 1.14e-08 | 92 |
regional part of brain | 1.44e-08 | 46 |
brain | 2.19e-08 | 47 |
future brain | 2.19e-08 | 47 |