FFCP PHASE1:Mm9::chr17:55585536..55585555,+: Difference between revisions
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|id=chr17:55585536..55585555,+
|short_description=p4@St6gal2
|description=CAGE_peak_4_at_St6gal2_5end
|association_with_transcript=0bp_to_ENSMUST00000153220_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=240119 | |EntrezGene=240119 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000153220_5end | |||
|cluster_id=chr17:55585536..55585555,+ | |||
|description=CAGE_peak_4_at_St6gal2_5end | |||
|id=chr17:55585536..55585555,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.23e-08!23;CL:0000337!5.23e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,8.39e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.10e-12!71;UBERON:0003075!4.10e-12!71;UBERON:0007284!4.10e-12!71;UBERON:0003056!1.83e-11!49;UBERON:0001049!7.74e-11!52;UBERON:0005068!7.74e-11!52;UBERON:0006241!7.74e-11!52;UBERON:0007135!7.74e-11!52;UBERON:0000033!1.64e-10!63;UBERON:0001017!1.48e-09!73;UBERON:0005743!1.48e-09!73;UBERON:0000073!4.74e-09!75;UBERON:0001016!4.74e-09!75;UBERON:0004121!5.22e-09!102;UBERON:0000924!5.22e-09!102;UBERON:0006601!5.22e-09!102;UBERON:0002020!6.04e-09!34;UBERON:0002240!8.35e-08!6;UBERON:0005174!8.35e-08!6;UBERON:0001137!8.35e-08!6;UBERON:0002616!1.04e-07!49;UBERON:0000955!2.00e-07!50;UBERON:0006238!2.00e-07!50;UBERON:0003080!6.23e-07!40;UBERON:0000970!7.60e-07!9;UBERON:0000019!7.60e-07!9;UBERON:0000047!7.60e-07!9;UBERON:0004088!7.60e-07!9;UBERON:0002104!7.60e-07!9;UBERON:0001456!7.60e-07!9;UBERON:0003072!7.60e-07!9;UBERON:0003071!7.60e-07!9;UBERON:0004128!7.60e-07!9;UBERON:0001948!9.25e-07!5;UBERON:0002315!9.25e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.86e-19,9;UBERON:0000019,1.86e-19,9;UBERON:0000047,1.86e-19,9;UBERON:0010312,1.86e-19,9;UBERON:0004088,1.86e-19,9;UBERON:0002104,1.86e-19,9;UBERON:0001456,1.86e-19,9;UBERON:0003072,1.86e-19,9;UBERON:0004128,1.86e-19,9;UBERON:0003071,1.86e-19,9;UBERON:0001444,6.29e-16,11;UBERON:0000020,1.33e-14,12;UBERON:0001032,1.33e-14,12;UBERON:0004456,1.33e-14,12;UBERON:0000033,1.77e-13,13;UBERON:0005085,1.77e-13,13;UBERON:0002346,9.51e-10,64;UBERON:0003075,9.51e-10,64;UBERON:0007284,9.51e-10,64;UBERON:0004121,3.35e-09,95;UBERON:0000924,3.35e-09,95;UBERON:0006601,3.35e-09,95;UBERON:0010371,2.06e-08,73;UBERON:0003056,2.38e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,0,0.510749352340751,0.614426133024974,0.395658863190582,0.182975287204819,0,0.558365998002762,0.56276261003168,0,1.47314292736834,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.748953197024114,0,0.376963056338593,1.21677024134594,0.511430914660661,0,0.162241263067758,0,0,0,0.420883711772948,0.130120442962704,0,0,1.20563854268572,3.74200745332303,8.58361925908494,9.18276900685342,4.13925393182425,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,1.35096360967266,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.287177344778066,0.952587382566147,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.953744759789284,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,0,0.510749352340751,0.614426133024974,0.395658863190582,0.182975287204819,0,0.558365998002762,0.56276261003168,0,1.47314292736834,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.748953197024114,0,0.376963056338593,1.21677024134594,0.511430914660661,0,0.162241263067758,0,0,0,0.420883711772948,0.130120442962704,0,0,1.20563854268572,3.74200745332303,8.58361925908494,9.18276900685342,4.13925393182425,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,1.35096360967266,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.287177344778066,0.952587382566147,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.953744759789284,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p4@St6gal2 | |||
}} | }} |
Latest revision as of 16:35, 26 September 2015
Short description: | p4@St6gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_St6gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000153220_5end |
EntrezGene: | St6gal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 8.39e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.86e-19 | 9 |
camera-type eye | 1.86e-19 | 9 |
simple eye | 1.86e-19 | 9 |
immature eye | 1.86e-19 | 9 |
ocular region | 1.86e-19 | 9 |
visual system | 1.86e-19 | 9 |
face | 1.86e-19 | 9 |
optic cup | 1.86e-19 | 9 |
optic vesicle | 1.86e-19 | 9 |
eye primordium | 1.86e-19 | 9 |
subdivision of head | 6.29e-16 | 11 |
sense organ | 1.33e-14 | 12 |
sensory system | 1.33e-14 | 12 |
entire sense organ system | 1.33e-14 | 12 |
head | 1.77e-13 | 13 |
ectodermal placode | 1.77e-13 | 13 |
neurectoderm | 9.51e-10 | 64 |
neural plate | 9.51e-10 | 64 |
presumptive neural plate | 9.51e-10 | 64 |
ectoderm-derived structure | 3.35e-09 | 95 |
ectoderm | 3.35e-09 | 95 |
presumptive ectoderm | 3.35e-09 | 95 |
ecto-epithelium | 2.06e-08 | 73 |
pre-chordal neural plate | 2.38e-08 | 49 |