FFCP PHASE2:Hg19::chr16:27226229..27226238,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:79831 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:25840 |TSScla...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=79831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25840 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DPM6 | ||
|association_with_transcript=0bp_to_ENST00000540888_5end | |association_with_transcript=0bp_to_ENST00000540888_5end | ||
|cluster_id=chr16:27226229..27226238,+ | |cluster_id=chr16:27226229..27226238,+ | ||
Latest revision as of 21:10, 15 September 2015
| Short description: | p8@JMJD5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_JMJD5_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | 0bp_to_ENST00000540888_5end |
| EntrezGene: | JMJD5 |
| HGNC: | 25840 |
| UniProt: | B4DPM6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@JMJD5 |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.39e-19 | 19 |
| digestive gland | 1.39e-19 | 19 |
| liver bud | 1.39e-19 | 19 |
| hepatic diverticulum | 4.85e-17 | 22 |
| liver primordium | 4.85e-17 | 22 |
| digestive tract diverticulum | 2.44e-16 | 23 |
| epithelial sac | 4.19e-15 | 25 |
| epithelium of foregut-midgut junction | 4.19e-15 | 25 |
| anatomical boundary | 4.19e-15 | 25 |
| hepatobiliary system | 4.19e-15 | 25 |
Showing 1 to 10 of 23 entries
