FFCP PHASE1:Mm9::chr18:27288460..27288463,-: Difference between revisions
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|id=chr18:27288460..27288463,-
|short_description=p@chr18:27288460..27288463,-
|description=CAGE_peak_at_chr18:27288460..27288463,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:27288460..27288463,- | |||
|description=CAGE_peak_at_chr18:27288460..27288463,- | |||
|id=chr18:27288460..27288463,- | |||
|ontology_enrichment_celltype=CL:0000063!5.06e-11!66;CL:0002076!7.30e-09!15;CL:0000066!9.77e-09!25;CL:0000239!8.16e-08!6;CL:0000677!8.16e-08!6;CL:0000212!8.16e-08!6;CL:0000584!8.16e-08!6;CL:0000223!4.07e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.49e-19,3;CL:0002202,1.49e-19,3;CL:0000069,1.49e-19,3;CL:0002632,1.49e-19,3;CL:0002368,1.49e-19,3;CL:0000307,1.49e-19,3;CL:0000377,1.49e-19,3;CL:0000066,2.09e-15,25;CL:0002076,8.76e-15,15;CL:0000223,5.11e-11,20;CL:0000682,1.79e-09,3;CL:0000473,9.05e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.86e-11!15;UBERON:0001242!1.32e-08!13;UBERON:0000060!1.32e-08!13;UBERON:0001262!1.32e-08!13;UBERON:0004786!1.32e-08!13;UBERON:0004923!1.70e-07!24;UBERON:0004119!2.06e-07!130;UBERON:0000925!2.06e-07!130;UBERON:0006595!2.06e-07!130;UBERON:0001007!4.22e-07!128;UBERON:0001555!4.22e-07!128;UBERON:0007026!4.22e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.49e-19,3;UBERON:0001005,1.49e-19,3;UBERON:0007196,1.49e-19,3;UBERON:0001558,1.49e-19,3;UBERON:0000344,3.73e-15,15;UBERON:0001962,9.45e-14,2;UBERON:0001961,9.45e-14,2;UBERON:0001744,9.45e-14,2;UBERON:0000331,9.97e-10,3;UBERON:0002116,9.97e-10,3;UBERON:0001204,9.97e-10,3;UBERON:0001168,9.97e-10,3;UBERON:0002465,1.79e-09,3;UBERON:0004923,2.35e-09,24;UBERON:0001242,3.34e-08,13;UBERON:0001262,3.34e-08,13;UBERON:0004786,3.34e-08,13;UBERON:0002108,1.66e-07,4;UBERON:0003199,2.05e-07,1 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0.60492842261366,0.500895729946347,0.503637815735669,2.10251376535973,0.129123323441576,0.281577444303333,0.234064526321993,0.513653904676515,0.159544317990673,0.171200729931206,0,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,3.51983330145495,1.37645568640302,2.29692785646008,0.86152399231815,1.50829862880122,3.6104449696711,0.504060259519861,1.77384408524244,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0.971020706062307,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,1.21161909333094,0.226714680320357,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,1.73192832808971,1.26679932737549,2.52762222507392,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,0.60492842261366,0.500895729946347,0.503637815735669,2.10251376535973,0.129123323441576,0.281577444303333,0.234064526321993,0.513653904676515,0.159544317990673,0.171200729931206,0,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,3.51983330145495,1.37645568640302,2.29692785646008,0.86152399231815,1.50829862880122,3.6104449696711,0.504060259519861,1.77384408524244,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0.971020706062307,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,1.21161909333094,0.226714680320357,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,1.73192832808971,1.26679932737549,2.52762222507392,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:27288460..27288463,- | |||
}} | }} |
Latest revision as of 14:57, 5 August 2015
Short description: | p@chr18:27288460..27288463, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:27288460..27288463, - |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.49e-19 | 3 |
epithelial cell of tracheobronchial tree | 1.49e-19 | 3 |
branched duct epithelial cell | 1.49e-19 | 3 |
epithelial cell of lower respiratory tract | 1.49e-19 | 3 |
respiratory epithelial cell | 1.49e-19 | 3 |
tracheal epithelial cell | 1.49e-19 | 3 |
tracheoblast | 1.49e-19 | 3 |
epithelial cell | 2.09e-15 | 25 |
endo-epithelial cell | 8.76e-15 | 15 |
endodermal cell | 5.11e-11 | 20 |
M cell of gut | 1.79e-09 | 3 |
defensive cell | 9.05e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.49e-19 | 3 |
respiratory airway | 1.49e-19 | 3 |
tracheobronchial tree | 1.49e-19 | 3 |
lower respiratory tract | 1.49e-19 | 3 |
mucosa | 3.73e-15 | 15 |
gut-associated lymphoid tissue | 9.45e-14 | 2 |
mucosa-associated lymphoid tissue | 9.45e-14 | 2 |
lymphoid tissue | 9.45e-14 | 2 |
ileal mucosa | 9.97e-10 | 3 |
ileum | 9.97e-10 | 3 |
mucosa of small intestine | 9.97e-10 | 3 |
wall of small intestine | 9.97e-10 | 3 |
lymphoid system | 1.79e-09 | 3 |
organ component layer | 2.35e-09 | 24 |
intestinal mucosa | 3.34e-08 | 13 |
wall of intestine | 3.34e-08 | 13 |
gastrointestinal system mucosa | 3.34e-08 | 13 |
small intestine | 1.66e-07 | 4 |
egg chamber | 2.05e-07 | 1 |