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FFCP PHASE1:Mm9::chr18:37501369..37501382,+: Difference between revisions

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(Created page with "{{FFCP |id=chr18:37501369..37501382,+ |short_description=p1@Pcdhb7 |description=CAGE_peak_1_at_Pcdhb7_5end |association_with_transcript=13bp_to_ENSMUST00000053037,NM_05313...")
 
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{{FFCP
{{FFCP
|id=chr18:37501369..37501382,+
|DHSsupport=NA
|short_description=p1@Pcdhb7
|DPIdataset=NA
|description=CAGE_peak_1_at_Pcdhb7_5end
|association_with_transcript=13bp_to_ENSMUST00000053037,NM_053132,uc008eps.1_5end
|EntrezGene=93878
|EntrezGene=93878
|HGNC=
|HGNC=
|MCL_coexpression_id=3138
|TSSclassifier=NA
|UniProt=Q8CDY9
|UniProt=Q8CDY9
|association_with_transcript=13bp_to_ENSMUST00000053037,NM_053132,uc008eps.1_5end
|cluster_id=chr18:37501369..37501382,+
|description=CAGE_peak_1_at_Pcdhb7_5end
|id=chr18:37501369..37501382,+
|ontology_enrichment_celltype=CL:0000540!9.34e-08!33;CL:0000047!9.34e-08!33;CL:0000031!9.34e-08!33;CL:0000404!9.34e-08!33;CL:0000117!2.47e-07!23;CL:0000337!2.47e-07!23;CL:0000393!3.95e-07!39;CL:0000211!3.95e-07!39
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.00e-17!71;UBERON:0003075!3.00e-17!71;UBERON:0007284!3.00e-17!71;UBERON:0003056!1.92e-16!49;UBERON:0000033!7.35e-16!63;UBERON:0001049!8.13e-16!52;UBERON:0005068!8.13e-16!52;UBERON:0006241!8.13e-16!52;UBERON:0007135!8.13e-16!52;UBERON:0001017!3.68e-15!73;UBERON:0005743!3.68e-15!73;UBERON:0000073!8.83e-15!75;UBERON:0001016!8.83e-15!75;UBERON:0004121!1.15e-14!102;UBERON:0000924!1.15e-14!102;UBERON:0006601!1.15e-14!102;UBERON:0003080!1.21e-13!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0000955!3.97e-13!50;UBERON:0006238!3.97e-13!50;UBERON:0002020!1.36e-12!34;UBERON:0002616!1.65e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000468!1.35e-08!333;UBERON:0004111!7.21e-08!122;UBERON:0000025!1.16e-07!114;UBERON:0000153!2.79e-07!94;UBERON:0000956!7.41e-07!21;UBERON:0001869!7.41e-07!21;UBERON:0000203!7.41e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.72e-22,64;UBERON:0003075,4.72e-22,64;UBERON:0007284,4.72e-22,64;UBERON:0003056,6.83e-20,49;UBERON:0001049,1.21e-19,52;UBERON:0005068,1.21e-19,52;UBERON:0006241,1.21e-19,52;UBERON:0007135,1.21e-19,52;UBERON:0010371,1.64e-18,73;UBERON:0000955,2.74e-17,47;UBERON:0006238,2.74e-17,47;UBERON:0000073,3.77e-17,54;UBERON:0002780,1.47e-16,39;UBERON:0001890,1.47e-16,39;UBERON:0006240,1.47e-16,39;UBERON:0002616,2.64e-16,46;UBERON:0003080,6.62e-16,40;UBERON:0004121,2.47e-15,95;UBERON:0000924,2.47e-15,95;UBERON:0006601,2.47e-15,95;UBERON:0001017,2.60e-15,73;UBERON:0001016,1.49e-14,75;UBERON:0002020,4.06e-14,34;UBERON:0010314,7.85e-12,92;UBERON:0003528,1.06e-11,29;UBERON:0002791,1.06e-11,29;UBERON:0001893,1.06e-11,29;UBERON:0000025,4.55e-08,114;UBERON:0004111,3.39e-07,122;UBERON:0000956,4.37e-07,21;UBERON:0001869,4.37e-07,21;UBERON:0000203,4.37e-07,21
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,1.47227472945967,0.856952953211411,1.54607978666129,1.5923803897944,0.479227355091182,1.83843757322004,0,0.638436690425939,0.768032666281217,1.58263545276233,1.73826522844578,3.12548022334056,0.837548997004143,1.12552522006336,1.5279824777681,1.17851434189467,2.13557521198654,3.91438836233131,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0.280888840263504,0.681721290312231,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.742210695324124,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0.578397427679647,0,1.13236794963186,0,0.969750506270444,0,0.292780797011547,1.8850203613211,0,0,0,0.127070227073065,0.748953197024114,2.74500361691176,4.02093926761166,3.47648640384553,2.30143911597297,1.87009240103604,2.59586020908412,1.12023300235348,0.870848794270651,0,0.420883711772948,1.04096354370163,0.229902104433473,1.26043490863744,1.50704817835715,1.90502197623718,1.92170580427275,1.96773621575431,2.58703370739016,0.215567992932842,0.567318240503458,1.05570674498369,1.31517439456545,2.50242524303038,1.0447564995665,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.817357396570186,0,0.656669856316381,0.486412857275134,0.438599962275997,0.219550115291051,0.402619256281115,2.73376933133365,4.42489833230923,0,0,0.426576501070468,1.16118335930219,0.644337306610467,1.21010114774006,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,1.13800740571849,0.114248512609729,0,0.610953983535943,0.193952487167626,1.1221731182451,0.69560190836683,0.442830443938806,0.627994911365499,0,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.744281895337007,0,0.252578877947112,0,0,1.47802552133284,0.189491411770485,1.14075483509418,0.169745085775188,0.469380496577004,1.34005005953453,0.238043640886014,0.195133647857799,2.04925687338048,1.10732344824387,1.43509291791738,1.96635977658886,1.55416483679306,0.723245292907558,0,0,0,0.551873492609465,1.44495530989013,1.64096361229084,4.59017847054691,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,2.00518806674155,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,3.21321316421807,1.84522110770749,1.42452482933804,3.58351310577867,1.64970122972535,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.720244376125241,1.03486947026204,1.50035924522115,1.59606210278046,1.78368817602071,1.97458824722545,2.74018454203139,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,1.66882771809459,0,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.632671987162271,1.42323626988794,1.40406943068342,2.71814784818809,0.87345025498471,1.34864346384821,0.330613822901344,0,0,0,0,0.598066184175915,0.496375471371293,0.777804753376191,1.03327858782185,1.18269287843545,1.40828686374905,0.911430693907651,0.734015410979976,0,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0,0,0.192423683280659,0,0.680191150845634,0,0,0,0.965947970160952,1.12609485270709,2.74727436400898,0.643105137237198,0,1.6942555278512,4.14292712856459,1.71868654031819,2.57779773515531,2.74033007908257,0.755393897389701,2.70009000092722,0.900642406448441,1.81256963593682,0.51776031175182,0.415149390336707,1.59609949360412,1.70733605754134,0.729320151204882,0.628839487883947,0.551530525350042,1.55572709461131,1.44224540067226,0.64183841918363,0.758091635291392,0.760437899670719,1.32038438970253,0.37456602987953,0.704276676453562,0.804096565378586,0.476293691283074,0.463537303779422,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,1.16277133305863,0.376437521661322,0.761531471025089,0.73171189149109,0.526139422875686,0.543216455383447,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,0.154936841185966,1.54325288784913,1.24905288968973,0.701794825336225,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,1.47227472945967,0.856952953211411,1.54607978666129,1.5923803897944,0.479227355091182,1.83843757322004,0,0.638436690425939,0.768032666281217,1.58263545276233,1.73826522844578,3.12548022334056,0.837548997004143,1.12552522006336,1.5279824777681,1.17851434189467,2.13557521198654,3.91438836233131,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0.280888840263504,0.681721290312231,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.742210695324124,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0.578397427679647,0,1.13236794963186,0,0.969750506270444,0,0.292780797011547,1.8850203613211,0,0,0,0.127070227073065,0.748953197024114,2.74500361691176,4.02093926761166,3.47648640384553,2.30143911597297,1.87009240103604,2.59586020908412,1.12023300235348,0.870848794270651,0,0.420883711772948,1.04096354370163,0.229902104433473,1.26043490863744,1.50704817835715,1.90502197623718,1.92170580427275,1.96773621575431,2.58703370739016,0.215567992932842,0.567318240503458,1.05570674498369,1.31517439456545,2.50242524303038,1.0447564995665,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.817357396570186,0,0.656669856316381,0.486412857275134,0.438599962275997,0.219550115291051,0.402619256281115,2.73376933133365,4.42489833230923,0,0,0.426576501070468,1.16118335930219,0.644337306610467,1.21010114774006,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,1.13800740571849,0.114248512609729,0,0.610953983535943,0.193952487167626,1.1221731182451,0.69560190836683,0.442830443938806,0.627994911365499,0,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.744281895337007,0,0.252578877947112,0,0,1.47802552133284,0.189491411770485,1.14075483509418,0.169745085775188,0.469380496577004,1.34005005953453,0.238043640886014,0.195133647857799,2.04925687338048,1.10732344824387,1.43509291791738,1.96635977658886,1.55416483679306,0.723245292907558,0,0,0,0.551873492609465,1.44495530989013,1.64096361229084,4.59017847054691,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,2.00518806674155,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,3.21321316421807,1.84522110770749,1.42452482933804,3.58351310577867,1.64970122972535,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.720244376125241,1.03486947026204,1.50035924522115,1.59606210278046,1.78368817602071,1.97458824722545,2.74018454203139,0.469343416127421,0,0.441056796109924,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,1.66882771809459,0,0.412773735926445,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.632671987162271,1.42323626988794,1.40406943068342,2.71814784818809,0.87345025498471,1.34864346384821,0.330613822901344,0,0,0,0,0.598066184175915,0.496375471371293,0.777804753376191,1.03327858782185,1.18269287843545,1.40828686374905,0.911430693907651,0.734015410979976,0,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0,0,0.192423683280659,0,0.680191150845634,0,0,0,0.965947970160952,1.12609485270709,2.74727436400898,0.643105137237198,0,1.6942555278512,4.14292712856459,1.71868654031819,2.57779773515531,2.74033007908257,0.755393897389701,2.70009000092722,0.900642406448441,1.81256963593682,0.51776031175182,0.415149390336707,1.59609949360412,1.70733605754134,0.729320151204882,0.628839487883947,0.551530525350042,1.55572709461131,1.44224540067226,0.64183841918363,0.758091635291392,0.760437899670719,1.32038438970253,0.37456602987953,0.704276676453562,0.804096565378586,0.476293691283074,0.463537303779422,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,1.16277133305863,0.376437521661322,0.761531471025089,0.73171189149109,0.526139422875686,0.543216455383447,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,0.154936841185966,1.54325288784913,1.24905288968973,0.701794825336225,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686
|short_description=p1@Pcdhb7
}}
}}

Latest revision as of 05:45, 27 September 2015

Short description:p1@Pcdhb7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdhb7_5end
Coexpression cluster:MCL_coexpression_mm9:3138
Association with transcript: 13bp_to_ENSMUST00000053037, NM_053132, uc008eps.1_5end
EntrezGene:Pcdhb7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcdhb7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.72e-2264
neural plate4.72e-2264
presumptive neural plate4.72e-2264
pre-chordal neural plate6.83e-2049
neural tube1.21e-1952
neural rod1.21e-1952
future spinal cord1.21e-1952
neural keel1.21e-1952
ecto-epithelium1.64e-1873
brain2.74e-1747
future brain2.74e-1747
regional part of nervous system3.77e-1754
regional part of forebrain1.47e-1639
forebrain1.47e-1639
future forebrain1.47e-1639
regional part of brain2.64e-1646
anterior neural tube6.62e-1640
ectoderm-derived structure2.47e-1595
ectoderm2.47e-1595
presumptive ectoderm2.47e-1595
central nervous system2.60e-1573
nervous system1.49e-1475
gray matter4.06e-1434
structure with developmental contribution from neural crest7.85e-1292
brain grey matter1.06e-1129
regional part of telencephalon1.06e-1129
telencephalon1.06e-1129
tube4.55e-08114
anatomical conduit3.39e-07122
cerebral cortex4.37e-0721
cerebral hemisphere4.37e-0721
pallium4.37e-0721
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