FFCP PHASE2:Hg19::chr20:29956369..29956413,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:117285 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16196 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=117285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16196 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96PH6 | ||
|association_with_transcript=-7bp_to_ENST00000253381,NM_054112_5end | |association_with_transcript=-7bp_to_ENST00000253381,NM_054112_5end | ||
|cluster_id=chr20:29956369..29956413,+ | |cluster_id=chr20:29956369..29956413,+ | ||
Latest revision as of 00:18, 25 September 2015
| Short description: | p1@DEFB118 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_DEFB118_5end |
| Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
| Association with transcript: | -7bp_to_ENST00000253381, NM_054112_5end |
| EntrezGene: | DEFB118 |
| HGNC: | 16196 |
| UniProt: | Q96PH6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@DEFB118 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 2.94e-11 | 5 |
| basophil mast progenitor cell | 2.94e-11 | 5 |
| endocrine cell | 7.91e-07 | 9 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| epididymis | 1.46e-50 | 1 |
| male reproductive organ | 5.35e-41 | 11 |
| testis | 1.43e-25 | 8 |
| male organism | 4.58e-21 | 22 |
| male reproductive system | 4.58e-21 | 22 |
| male genital duct | 6.76e-18 | 3 |
| internal male genitalia | 6.76e-18 | 3 |
| duct of male reproductive system | 8.82e-14 | 4 |
| gonad | 1.86e-10 | 21 |
| indifferent external genitalia | 1.86e-10 | 21 |
Showing 1 to 10 of 30 entries
