FFCP PHASE1:Mm9::chr1:187255810..187255825,+: Difference between revisions
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|id=chr1:187255810..187255825,+
|short_description=p@chr1:187255810..187255825,+
|description=CAGE_peak_at_chr1:187255810..187255825,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:187255810..187255825,+ | |||
|description=CAGE_peak_at_chr1:187255810..187255825,+ | |||
|id=chr1:187255810..187255825,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.16e-17!6;CL:0000677!3.16e-17!6;CL:0000212!3.16e-17!6;CL:0000584!3.16e-17!6;CL:0000075!1.13e-14!7;CL:0002563!2.88e-11!9;CL:0002251!2.88e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.21e-13,6;CL:0000677,1.21e-13,6;CL:0000584,1.21e-13,6;CL:0000075,1.01e-11,7;CL:0002563,3.72e-09,9;CL:0002251,3.72e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.51e-29!43;UBERON:0000344!1.48e-25!15;UBERON:0005409!5.46e-22!59;UBERON:0001242!4.89e-21!13;UBERON:0000060!4.89e-21!13;UBERON:0001262!4.89e-21!13;UBERON:0004786!4.89e-21!13;UBERON:0004923!4.87e-15!24;UBERON:0003350!2.88e-11!9;UBERON:0004808!2.88e-11!9;UBERON:0001277!2.88e-11!9;UBERON:0001007!3.00e-10!128;UBERON:0001555!3.00e-10!128;UBERON:0007026!3.00e-10!128;UBERON:0004119!5.24e-10!130;UBERON:0000925!5.24e-10!130;UBERON:0006595!5.24e-10!130;UBERON:0000331!2.50e-09!3;UBERON:0002116!2.50e-09!3;UBERON:0001204!2.50e-09!3;UBERON:0001168!2.50e-09!3;UBERON:0000485!4.27e-09!11;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126;UBERON:0001155!5.06e-07!2;UBERON:0000059!5.06e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-43,31;UBERON:0005409,6.56e-32,47;UBERON:0001242,2.81e-18,13;UBERON:0001262,2.81e-18,13;UBERON:0004786,2.81e-18,13;UBERON:0000344,9.39e-16,15;UBERON:0004921,8.20e-12,114;UBERON:0002108,1.14e-11,4;UBERON:0001007,1.44e-11,116;UBERON:0001555,1.44e-11,116;UBERON:0007026,1.44e-11,116;UBERON:0004119,2.49e-11,118;UBERON:0000925,2.49e-11,118;UBERON:0006595,2.49e-11,118;UBERON:0001155,7.75e-11,2;UBERON:0000059,7.75e-11,2;UBERON:0004923,1.39e-09,24;UBERON:0003350,3.72e-09,9;UBERON:0004808,3.72e-09,9;UBERON:0001277,3.72e-09,9;UBERON:0000485,1.63e-07,11;UBERON:0000331,1.78e-07,3;UBERON:0002116,1.78e-07,3;UBERON:0001204,1.78e-07,3;UBERON:0001168,1.78e-07,3 | |||
|phase1_expression=0,3.48975407639361,4.09499315450582,5.14189159221611,5.00895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,0,0.86152399231815,0.215471232685889,5.13063232532209,2.01624103807945,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,3.17340679996253,0,0,0,0,0,0,3.32170343081158,0.988193728344065,0.754005626400808,1.1937388322469,1.55971269695296,3.59527763461689,7.13255564586491,4.77939055810481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9198288893858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,3.48975407639361,4.09499315450582,5.14189159221611,5.00895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,0,0.86152399231815,0.215471232685889,5.13063232532209,2.01624103807945,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,3.17340679996253,0,0,0,0,0,0,3.32170343081158,0.988193728344065,0.754005626400808,1.1937388322469,1.55971269695296,3.59527763461689,7.13255564586491,4.77939055810481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9198288893858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:187255810..187255825,+ | |||
}} | }} |
Latest revision as of 11:01, 5 August 2015
Short description: | p@chr1:187255810..187255825, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187255810..187255825, + |
Coexpression cluster: | MCL_coexpression_mm9:125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.21e-13 | 6 |
gut absorptive cell | 1.21e-13 | 6 |
enterocyte | 1.21e-13 | 6 |
columnar/cuboidal epithelial cell | 1.01e-11 | 7 |
intestinal epithelial cell | 3.72e-09 | 9 |
epithelial cell of alimentary canal | 3.72e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-43 | 31 |
gastrointestinal system | 6.56e-32 | 47 |
intestinal mucosa | 2.81e-18 | 13 |
wall of intestine | 2.81e-18 | 13 |
gastrointestinal system mucosa | 2.81e-18 | 13 |
mucosa | 9.39e-16 | 15 |
subdivision of digestive tract | 8.20e-12 | 114 |
small intestine | 1.14e-11 | 4 |
digestive system | 1.44e-11 | 116 |
digestive tract | 1.44e-11 | 116 |
primitive gut | 1.44e-11 | 116 |
endoderm-derived structure | 2.49e-11 | 118 |
endoderm | 2.49e-11 | 118 |
presumptive endoderm | 2.49e-11 | 118 |
colon | 7.75e-11 | 2 |
large intestine | 7.75e-11 | 2 |
organ component layer | 1.39e-09 | 24 |
epithelium of mucosa | 3.72e-09 | 9 |
gastrointestinal system epithelium | 3.72e-09 | 9 |
intestinal epithelium | 3.72e-09 | 9 |
simple columnar epithelium | 1.63e-07 | 11 |
ileal mucosa | 1.78e-07 | 3 |
ileum | 1.78e-07 | 3 |
mucosa of small intestine | 1.78e-07 | 3 |
wall of small intestine | 1.78e-07 | 3 |