FFCP PHASE1:Mm9::chr1:187265620..187265640,-: Difference between revisions
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|id=chr1:187265620..187265640,-
|short_description=p2@9630028B13Rik
|description=CAGE_peak_2_at_9630028B13Rik_5end
|association_with_transcript=57bp_to_ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319562 | |EntrezGene=319562 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH25 | |UniProt=Q8BH25 | ||
|association_with_transcript=57bp_to_ENSMUST00000143787,NR_038006,uc007dzi.1_5end | |||
|cluster_id=chr1:187265620..187265640,- | |||
|description=CAGE_peak_2_at_9630028B13Rik_5end | |||
|id=chr1:187265620..187265640,- | |||
|ontology_enrichment_celltype=CL:0000117!7.67e-10!23;CL:0000337!7.67e-10!23;CL:0002609!1.11e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.39e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.10e-23!63;UBERON:0003056!1.28e-19!49;UBERON:0002346!3.71e-19!71;UBERON:0003075!3.71e-19!71;UBERON:0007284!3.71e-19!71;UBERON:0001049!9.75e-16!52;UBERON:0005068!9.75e-16!52;UBERON:0006241!9.75e-16!52;UBERON:0007135!9.75e-16!52;UBERON:0000955!1.67e-15!50;UBERON:0006238!1.67e-15!50;UBERON:0007811!9.65e-15!86;UBERON:0002616!1.14e-14!49;UBERON:0004121!2.64e-14!102;UBERON:0000924!2.64e-14!102;UBERON:0006601!2.64e-14!102;UBERON:0001017!1.99e-13!73;UBERON:0005743!1.99e-13!73;UBERON:0000073!8.49e-13!75;UBERON:0001016!8.49e-13!75;UBERON:0000153!1.68e-12!94;UBERON:0003080!1.67e-11!40;UBERON:0000970!6.20e-11!9;UBERON:0000019!6.20e-11!9;UBERON:0000047!6.20e-11!9;UBERON:0004088!6.20e-11!9;UBERON:0002104!6.20e-11!9;UBERON:0001456!6.20e-11!9;UBERON:0003072!6.20e-11!9;UBERON:0003071!6.20e-11!9;UBERON:0004128!6.20e-11!9;UBERON:0002780!9.35e-11!39;UBERON:0001890!9.35e-11!39;UBERON:0006240!9.35e-11!39;UBERON:0000020!1.80e-09!12;UBERON:0001032!1.80e-09!12;UBERON:0004456!1.80e-09!12;UBERON:0005085!1.51e-08!13;UBERON:0001444!1.52e-08!11;UBERON:0002020!3.13e-08!34;UBERON:0001894!4.65e-07!10;UBERON:0006222!4.65e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.07e-48,9;UBERON:0000019,4.07e-48,9;UBERON:0000047,4.07e-48,9;UBERON:0010312,4.07e-48,9;UBERON:0004088,4.07e-48,9;UBERON:0002104,4.07e-48,9;UBERON:0001456,4.07e-48,9;UBERON:0003072,4.07e-48,9;UBERON:0004128,4.07e-48,9;UBERON:0003071,4.07e-48,9;UBERON:0001444,2.73e-39,11;UBERON:0000020,5.60e-36,12;UBERON:0001032,5.60e-36,12;UBERON:0004456,5.60e-36,12;UBERON:0000033,3.57e-33,13;UBERON:0005085,3.57e-33,13;UBERON:0003056,5.89e-19,49;UBERON:0002346,2.96e-14,64;UBERON:0003075,2.96e-14,64;UBERON:0007284,2.96e-14,64;UBERON:0010371,2.35e-12,73;UBERON:0007811,1.38e-11,36;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000153,1.39e-09,43;UBERON:0010314,1.50e-09,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,1.14058573539325,1.35005938331691,0.841299845405528,0.285650984403804,0.441737081903227,0.244981598429908,0.670918297127655,1.83843757322004,1.10115880999389,0,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.916789486660861,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.486723789203273,0,0,0,0,1.04096354370163,1.37941262660084,3.42118046630164,4.06903008156431,8.64063539221864,15.8861013153214,12.5560310910037,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.709360934569094,0.178368817602071,2.13913726782757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,1.14058573539325,1.35005938331691,0.841299845405528,0.285650984403804,0.441737081903227,0.244981598429908,0.670918297127655,1.83843757322004,1.10115880999389,0,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.916789486660861,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.486723789203273,0,0,0,0,1.04096354370163,1.37941262660084,3.42118046630164,4.06903008156431,8.64063539221864,15.8861013153214,12.5560310910037,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.709360934569094,0.178368817602071,2.13913726782757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | ||
|short_description=p2@9630028B13Rik | |||
}} | }} |
Latest revision as of 23:13, 26 September 2015
Short description: | p2@9630028B13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_9630028B13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 57bp_to_ENSMUST00000143787, NR_038006, uc007dzi.1_5end |
EntrezGene: | 9630028B13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.39e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
eye | 4.07e-48 | 9 |
camera-type eye | 4.07e-48 | 9 |
simple eye | 4.07e-48 | 9 |
immature eye | 4.07e-48 | 9 |
ocular region | 4.07e-48 | 9 |
visual system | 4.07e-48 | 9 |
face | 4.07e-48 | 9 |
optic cup | 4.07e-48 | 9 |
optic vesicle | 4.07e-48 | 9 |
eye primordium | 4.07e-48 | 9 |
subdivision of head | 2.73e-39 | 11 |
sense organ | 5.60e-36 | 12 |
sensory system | 5.60e-36 | 12 |
entire sense organ system | 5.60e-36 | 12 |
head | 3.57e-33 | 13 |
ectodermal placode | 3.57e-33 | 13 |
pre-chordal neural plate | 5.89e-19 | 49 |
neurectoderm | 2.96e-14 | 64 |
neural plate | 2.96e-14 | 64 |
presumptive neural plate | 2.96e-14 | 64 |
ecto-epithelium | 2.35e-12 | 73 |
craniocervical region | 1.38e-11 | 36 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
anterior region of body | 1.39e-09 | 43 |
structure with developmental contribution from neural crest | 1.50e-09 | 92 |