FFCP PHASE1:Mm9::chr1:193141969..193142005,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:193141969..193142005,-
|short_description=p1@Nenf
|description=CAGE_peak_1_at_Nenf_5end
|association_with_transcript=0bp_to_NM_025424,uc007ecg.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66208 | |EntrezGene=66208 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1750 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQ45 | |UniProt=Q9CQ45 | ||
|association_with_transcript=0bp_to_NM_025424,uc007ecg.1_5end | |||
|cluster_id=chr1:193141969..193142005,- | |||
|description=CAGE_peak_1_at_Nenf_5end | |||
|id=chr1:193141969..193142005,- | |||
|ontology_enrichment_celltype=CL:0000055!1.39e-08!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.45e-13,92;UBERON:0000073,1.81e-10,54;UBERON:0001016,2.51e-10,75;UBERON:0001017,2.54e-10,73;UBERON:0001049,2.91e-09,52;UBERON:0005068,2.91e-09,52;UBERON:0006241,2.91e-09,52;UBERON:0007135,2.91e-09,52;UBERON:0004111,4.33e-09,122;UBERON:0004121,3.71e-08,95;UBERON:0000924,3.71e-08,95;UBERON:0006601,3.71e-08,95;UBERON:0002616,5.96e-08,46;UBERON:0000025,7.12e-08,114;UBERON:0002020,9.49e-08,34;UBERON:0003080,1.13e-07,40;UBERON:0000955,1.14e-07,47;UBERON:0006238,1.14e-07,47;UBERON:0002780,1.59e-07,39;UBERON:0001890,1.59e-07,39;UBERON:0006240,1.59e-07,39;UBERON:0002346,3.22e-07,64;UBERON:0003075,3.22e-07,64;UBERON:0007284,3.22e-07,64 | |||
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| ||
|short_description=p1@Nenf | |||
}} | }} |
Latest revision as of 00:13, 27 September 2015
Short description: | p1@Nenf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nenf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1750 |
Association with transcript: | 0bp_to_NM_025424, uc007ecg.1_5end |
EntrezGene: | Nenf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.45e-13 | 92 |
regional part of nervous system | 1.81e-10 | 54 |
nervous system | 2.51e-10 | 75 |
central nervous system | 2.54e-10 | 73 |
neural tube | 2.91e-09 | 52 |
neural rod | 2.91e-09 | 52 |
future spinal cord | 2.91e-09 | 52 |
neural keel | 2.91e-09 | 52 |
anatomical conduit | 4.33e-09 | 122 |
ectoderm-derived structure | 3.71e-08 | 95 |
ectoderm | 3.71e-08 | 95 |
presumptive ectoderm | 3.71e-08 | 95 |
regional part of brain | 5.96e-08 | 46 |
tube | 7.12e-08 | 114 |
gray matter | 9.49e-08 | 34 |
anterior neural tube | 1.13e-07 | 40 |
brain | 1.14e-07 | 47 |
future brain | 1.14e-07 | 47 |
regional part of forebrain | 1.59e-07 | 39 |
forebrain | 1.59e-07 | 39 |
future forebrain | 1.59e-07 | 39 |
neurectoderm | 3.22e-07 | 64 |
neural plate | 3.22e-07 | 64 |
presumptive neural plate | 3.22e-07 | 64 |