FFCP PHASE1:Hg19::chr2:233243453..233243468,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=439 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 21:03, 15 September 2015
| Short description: | p1@ALPP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ALPP_5end |
| Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
| Association with transcript: | 19bp_to_ENST00000474529_5end |
| EntrezGene: | ALPP |
| HGNC: | 439 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ALPP |
|---|
0
250
500
750
1000
1250
1500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.11e-16 | 253 |
| chorionic membrane mesenchymal stem cell | 4.70e-11 | 3 |
| placental epithelial cell | 1.13e-09 | 3 |
| extraembryonic cell | 1.19e-09 | 19 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| larynx | 4.71e-31 | 9 |
| chorion | 3.69e-22 | 7 |
| extraembryonic membrane | 2.20e-17 | 14 |
| membranous layer | 2.20e-17 | 14 |
| upper respiratory tract | 7.89e-17 | 19 |
| respiratory primordium | 2.32e-14 | 38 |
| endoderm of foregut | 2.32e-14 | 38 |
| placenta | 7.47e-13 | 4 |
| allantois | 7.47e-13 | 4 |
| endoderm-derived structure | 2.35e-12 | 160 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.86e-26 | 106 |
| cell type cancer | 1.22e-18 | 143 |
| cancer | 6.31e-12 | 235 |
| disease of cellular proliferation | 1.76e-11 | 239 |
| squamous cell carcinoma | 2.38e-10 | 14 |
| tubular adenocarcinoma | 3.96e-07 | 2 |
Showing 1 to 6 of 6 entries
