FFCP PHASE1:Mm9::chr2:121973416..121973432,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:121973416..121973432,+
|short_description=p1@B2m
|description=CAGE_peak_1_at_B2m_5end
|association_with_transcript=0bp_to_ENSMUST00000102476,NM_009735,uc00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12010 | |EntrezGene=12010 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1763 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XJ8 | |UniProt=Q91XJ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000102476,NM_009735,uc008maf.1_5end | |||
|cluster_id=chr2:121973416..121973432,+ | |||
|description=CAGE_peak_1_at_B2m_5end | |||
|id=chr2:121973416..121973432,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.52e-16!66;CL:0000219!1.20e-14!54;CL:0002320!2.27e-14!46;CL:0000134!2.27e-14!46;CL:0000988!1.39e-08!32;CL:0002032!1.39e-08!32;CL:0000037!1.39e-08!32;CL:0000566!1.39e-08!32;CL:0000837!1.39e-08!32;CL:0000144!1.18e-07!121;CL:0000012!1.18e-07!121;CL:0000738!1.52e-07!17;CL:0002087!1.52e-07!17;CL:0002031!2.94e-07!25;CL:0000838!3.94e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.20e-14,54;CL:0002320,2.27e-14,46;CL:0000134,2.27e-14,46;CL:0000988,1.39e-08,32;CL:0002032,1.39e-08,32;CL:0000037,1.39e-08,32;CL:0000837,1.39e-08,32;CL:0000738,1.52e-07,17;CL:0002087,1.52e-07,17;CL:0002031,2.94e-07,25;CL:0000838,3.94e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.29e-17!70;UBERON:0002384!2.27e-14!46;UBERON:0000490!8.85e-13!66;UBERON:0002193!8.02e-12!48;UBERON:0003929!2.58e-11!55;UBERON:0004119!2.88e-11!130;UBERON:0000925!2.88e-11!130;UBERON:0006595!2.88e-11!130;UBERON:0001007!6.44e-11!128;UBERON:0001555!6.44e-11!128;UBERON:0007026!6.44e-11!128;UBERON:0002390!2.16e-10!45;UBERON:0003061!2.16e-10!45;UBERON:0004921!3.45e-10!126;UBERON:0004185!3.45e-10!126;UBERON:0005057!2.38e-09!51;UBERON:0005911!3.02e-09!69;UBERON:0002204!6.11e-08!32;UBERON:0005256!7.67e-08!47;UBERON:0002371!1.08e-07!16;UBERON:0002530!9.04e-07!65;UBERON:0003081!9.94e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.27e-14,46;UBERON:0004119,1.37e-13,118;UBERON:0000925,1.37e-13,118;UBERON:0006595,1.37e-13,118;UBERON:0001007,3.21e-13,116;UBERON:0001555,3.21e-13,116;UBERON:0007026,3.21e-13,116;UBERON:0000490,8.85e-13,66;UBERON:0004921,2.05e-12,114;UBERON:0002193,8.02e-12,48;UBERON:0002405,8.02e-12,48;UBERON:0003929,2.58e-11,55;UBERON:0002390,2.16e-10,45;UBERON:0003061,2.16e-10,45;UBERON:0005911,3.02e-09,69;UBERON:0005256,4.61e-09,45;UBERON:0002204,6.11e-08,32;UBERON:0002371,1.08e-07,16;UBERON:0002530,9.04e-07,65 | |||
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|phase1_expression=120.111635328595,3219.99608628838,2892.43016479928,2484.138567463,1998.57396248593,1238.94902670975,1999.02336557591,5739.91909694839,8196.15624878143,7342.13606166829,2785.03147115606,2377.84851533299,5387.17336874525,5193.64610771264,1541.9650874447,2078.40861975656,1281.59736073076,3898.16597733174,3615.57049974973,3573.78525779121,1338.58138697784,1909.26570064182,3664.37184183012,3692.30513322624,3533.36174699655,4062.11691414965,4056.91647982617,4085.55004295714,7161.60263247182,5593.5566998919,3755.89311999021,83.8240488966713,83.033746323917,126.785344812351,1065.2847736427,1209.19081033767,1066.98905582714,3319.37436337442,3938.71147174448,3350.55196143231,4149.38491657077,4172.72486761114,3028.61358220834,2220.94576590716,2095.05566058249,899.929725848725,1431.77616015691,490.556601856005,748.910196941814,897.877273925041,692.372841359043,432.695218738564,4058.32567532453,4880.23649145233,6315.53857968604,2012.28330867318,2067.05223571819,2784.62929829819,16.7922662513466,36.5003775697703,34.2268957893337,382.55547670605,862.615952227805,8471.65593848709,13778.8638960082,7955.24584705148,2586.44775410539,1355.13796286912,23.5375419940244,23.7610451463776,19.1395714829758,131.113801841346,186.854785645065,18.2511290830282,15.814502718009,17.4651569455904,284.098972978423,150.543371602436,181.409315775624,18.3321939944969,29.0015830219639,22.3992749339407,225.300680194114,235.234770993242,279.162398688232,121.092348629677,144.507256011089,28.519115211271,2090.11866218921,1972.26657566689,4025.9278835776,7626.79724556301,8252.13210587726,8644.96572365456,9434.75358134016,7787.60335152589,2546.25733698866,2374.77611480266,2081.14568287358,1842.31254149691,148.026434185291,1967.24489876149,764.415719119937,440.861355955065,582.360900320166,570.059697318972,510.074165019916,3862.61228313636,10668.4997441471,2524.55545907548,138.441290759376,355.006747711957,362.296946189268,629.116301666647,753.038080497054,572.662656689331,1294.31285105718,3748.44912943487,2876.75351494099,273.709510111016,456.921101694554,581.850303762267,1617.8804873733,187.965271681413,93.8321246524279,4045.16246922804,2851.4801481164,3928.16308254483,3150.45213982249,199.371341047819,359.137973212622,30.7853162676518,200.593265501887,118.651972201273,293.188930873539,139.203003712136,333.116559154385,1185.34961597297,4623.05742002721,555.776941396178,91.6047918457434,99.7775133241272,128.204236421409,116.042709733501,107.293559161644,127.85749284428,106.164053926173,196.873265132391,64.6703978798527,103.062813691461,129.148125136338,173.822215815067,163.491782544652,335.018584194324,334.395971662908,113.051463552904,3214.02975833268,3103.10106398924,2416.52639886012,196.355232363656,196.76736432414,178.441502907866,244.794056595107,183.38426398858,169.076755724567,138.822765015993,196.644403225921,188.10896655351,111.242458541513,207.015172203739,203.806987198281,265.645377151829,726.491331498087,567.022119262571,227.113144449257,72.5477517273955,8882.64814295344,2534.22978033675,97.6860187451371,122.156489398591,240.208947904382,352.542801041603,497.68206212482,908.32736468747,2537.3068920785,1968.97600372555,1345.90004312544,2133.80816264134,1745.12354380324,2436.69941686159,2171.1067109913,2697.96597005017,135.802217082406,100.652939609171,174.696990293275,128.503987870393,162.726136733638,154.649482858152,297.527907169631,423.198294257519,495.958981250903,546.772833337498,5977.37431995818,267.786394674331,301.32493950854,453.99660490502,480.98134781214,611.866454291881,682.142656922424,1077.99742702819,1457.43355348079,1244.58688598157,1682.08801637005,2752.72658990392,1932.13727192536,2083.01800642983,3613.96089539892,4444.7521623207,2716.05664863926,141.360593180782,200.935815953018,152.261341940344,184.93591565134,263.654849213418,458.710095987348,293.090739082414,460.767526222396,707.136754048538,306.631520128348,1143.76593671585,1157.68011842896,1490.75319774106,20491.0275745077,23214.4384910663,2322.60266146891,2275.92628352143,302.477311537,191.406684205068,572.296894309974,551.144034087146,540.781088079464,734.02483927768,347.693363940737,665.76707109581,591.530479688756,437.919393130324,773.998061602398,790.552095650099,691.753611406416,264.126122098725,791.315975036098,229.348497523425,219.08296033056,1581.07365856878,562.839386561442,146.396723601454,93.1156555451433,141.642414896679,258.979760056438,281.610595516638,629.531322157787,348.992380298405,295.536326680934,291.385890816822,258.275591008747,338.284581854053,1166.68652891823,80.4873090319957,99.7355451965037,99.6667212896904,160.847591913542,165.347893917119,137.233883182169,303.85601921637,1250.56553227151,1323.31494668628,7773.84655983546,2213.43305948643,475.028343339354,265.738747233455,306.548179400054,201.0726021877,2076.50948015106,344.334785833516,2353.57551210962,381.609318863998,717.443599030263,765.529409267064,1510.33452208961,1251.87416378609,4498.81910664737,4762.12806821711,4346.66557609674,1453.008680619,100.753013955592,21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| ||
|short_description=p1@B2m | |||
}} | }} |
Latest revision as of 15:14, 25 September 2015
Short description: | p1@B2m |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B2m_5end |
Coexpression cluster: | MCL_coexpression_mm9:1763 |
Association with transcript: | 0bp_to_ENSMUST00000102476, NM_009735, uc008maf.1_5end |
EntrezGene: | B2m |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.20e-14 | 54 |
connective tissue cell | 2.27e-14 | 46 |
mesenchymal cell | 2.27e-14 | 46 |
hematopoietic cell | 1.39e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.39e-08 | 32 |
hematopoietic stem cell | 1.39e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.39e-08 | 32 |
leukocyte | 1.52e-07 | 17 |
nongranular leukocyte | 1.52e-07 | 17 |
hematopoietic lineage restricted progenitor cell | 2.94e-07 | 25 |
lymphoid lineage restricted progenitor cell | 3.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.27e-14 | 46 |
endoderm-derived structure | 1.37e-13 | 118 |
endoderm | 1.37e-13 | 118 |
presumptive endoderm | 1.37e-13 | 118 |
digestive system | 3.21e-13 | 116 |
digestive tract | 3.21e-13 | 116 |
primitive gut | 3.21e-13 | 116 |
unilaminar epithelium | 8.85e-13 | 66 |
subdivision of digestive tract | 2.05e-12 | 114 |
hemolymphoid system | 8.02e-12 | 48 |
immune system | 8.02e-12 | 48 |
gut epithelium | 2.58e-11 | 55 |
hematopoietic system | 2.16e-10 | 45 |
blood island | 2.16e-10 | 45 |
endo-epithelium | 3.02e-09 | 69 |
trunk mesenchyme | 4.61e-09 | 45 |
musculoskeletal system | 6.11e-08 | 32 |
bone marrow | 1.08e-07 | 16 |
gland | 9.04e-07 | 65 |