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FFCP PHASE1:Mm9::chr3:135988926..135988998,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:135988926..135988998,-
|DHSsupport=NA
|short_description=p1@Bank1
|DPIdataset=NA
|description=CAGE_peak_1_at_Bank1_5end
|association_with_transcript=11bp_to_ENSMUST00000163105,NM_001033350,uc008rmd.1,uc008rme.1,uc012cyj.1,uc012cyk.1_5end
|EntrezGene=242248
|EntrezGene=242248
|HGNC=
|HGNC=
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=B0F3S4,Q80VH0,Q14B54
|UniProt=B0F3S4,Q80VH0,Q14B54
|association_with_transcript=11bp_to_ENSMUST00000163105,NM_001033350,uc008rmd.1,uc008rme.1,uc012cyj.1,uc012cyk.1_5end
|cluster_id=chr3:135988926..135988998,-
|description=CAGE_peak_1_at_Bank1_5end
|id=chr3:135988926..135988998,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000553,6.44e-07,6;CL:0000556,6.44e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!5.30e-09!128;UBERON:0001555!5.30e-09!128;UBERON:0007026!5.30e-09!128;UBERON:0004119!9.02e-09!130;UBERON:0000925!9.02e-09!130;UBERON:0006595!9.02e-09!130;UBERON:0004921!3.34e-08!126;UBERON:0004185!3.34e-08!126;UBERON:0000077!3.57e-08!97;UBERON:0000466!5.29e-08!79;UBERON:0001041!5.70e-08!92;UBERON:0002365!2.23e-07!25;UBERON:0002330!2.23e-07!25;UBERON:0003104!8.17e-07!131;UBERON:0009142!8.17e-07!131;UBERON:0005177!9.56e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.61e-10,116;UBERON:0001555,1.61e-10,116;UBERON:0007026,1.61e-10,116;UBERON:0004119,1.94e-10,118;UBERON:0000925,1.94e-10,118;UBERON:0006595,1.94e-10,118;UBERON:0004921,1.77e-09,114;UBERON:0002365,8.59e-09,25;UBERON:0002330,8.59e-09,25;UBERON:0001041,1.52e-07,80;UBERON:0009854,2.33e-07,23;UBERON:0009856,2.33e-07,23;UBERON:0002107,7.05e-07,22;UBERON:0007499,7.05e-07,22;UBERON:0006925,7.05e-07,22;UBERON:0009497,7.05e-07,22;UBERON:0000015,7.05e-07,22;UBERON:0002423,7.05e-07,22;UBERON:0006235,7.05e-07,22;UBERON:0008835,7.05e-07,22;UBERON:0003894,7.05e-07,22;UBERON:0004161,7.05e-07,22;UBERON:0008836,7.05e-07,22
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,37.3082933233542,65.3995113669138,9.79386629379405,324.926030318985,362.667676887179,236.385036051503,1.78590909317247,1.48936426801328,0.522399578277871,17.2791816616879,12.6175104586944,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,9.37602413428561,16.7527598071615,17.0587131528994,12.294818729252,17.9638830621527,0,0,0,0,0,0,0,0,0,250.331648238143,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,1.53224805702225,0.46081959976873,0,0,0,0.558365998002762,0,0.15279824777681,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0.289864488701678,4.30211938490693,0,1.07940638327563,2.59910566979068,0.448026887097336,7.44355426698285,0,0,0,0,0,0,0,0,0,0,6.62266502370548,743.151726067383,1.33597925158342,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.628332956648377,0,14.0261376212314,15.9229899350977,1.94120219936891,6.8460870722722,5.33362778448744,3.72783522436244,0,0,4.34276993854605,0.359445373517761,0,0.127070227073065,0.299581278809645,0,0,1.04294592115366,0.511430914660661,0,0.648965052271031,0.203678727700633,11.4454412961286,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.281105173679186,0.517406741478031,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.233530684734339,0.822799249567402,2.29834449710733,1.21603214318784,1.46199987425332,3.95190207523891,2.14730270016595,0.841159794256509,0.308713837137853,1.32167513193519,1.58670339998127,0.213288250535234,0.696710015581316,0.77320476793256,1.4117846723634,1.55664630691409,1.52180500890047,6.16887780007865,1.15289268306808,2.5133520880027,3.58121649674071,3.8992817423824,14.3811105384675,4.32276099749388,3.38540164532424,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.316182685621286,0.295220295959204,1.56998727841375,0.863780147452604,3.26097889795864,1.00107063429656,2.16214894624523,3.14806957338795,3.24576194221605,2.65294875727659,3.56476192493988,2.30156909960649,4.37765112292595,5.76578967694971,4.31304619582064,5.95425516269605,8.42501717409313,5.55673531483646,0.896987067609561,3.37710464954357,21.2466168691595,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.390267295715598,3.15270288212382,2.87904096543407,5.74037167166954,13.9283817508377,16.7504432409919,9.25753974921674,0,0.54390568381871,8.35999264132362,9.10591262805617,0.642202359951168,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.92792789853084,1.41940085208269,0.712262414669021,0.162886959353576,2.14461159864296,5.30980553359851,0.485561272309963,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,1.03371317267288,1.81766864738753,1.42598951353889,8.53299246426703,3.16255825724996,4.12542172992747,0.340439605753788,0,0.517434735131018,0,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,0,1.0591603543191,0.661585194164886,1.31909002353184,0.645857706783622,0.542816324353403,0.238744688006273,0.328281799490123,6.70405924248657,0.556275906031529,93.6372426772233,1.44470807574256,9.63011542322501,34.8481645458678,81.7431481771731,79.6148042758699,0,1.39951452323658,0.829199842826543,0.954670618015114,0,0.406638934253697,0.324016022465404,1.67270636811575,1.09181281873089,1.07891477107857,1.57041565878138,1.83229159388821,3.24037433229482,15.5334828271731,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.2604087696879,0.419437377702843,0.724752362478018,0.288030006257865,7.2682557744481,0.405450430580328,0.924398614483445,0.77952493786677,0.179026695667481,0.39736270956253,1.20195449519969,0.738447635872886,2.22126189885925,0.533447646584999,1.10908803650525,2.53390489923356,2.21287235772758,2.68816875017609,1.36038230169127,0,0,0,2.12508553435409,2.81523713176773,0.915758121336325,1.50057865355346,0.501572104035363,1.12950368523413,1.84130094602871,0.572895513439397,0.343706364687375,0,0,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0,0.798049746802062,0.341467211508268,0.729320151204882,0.628839487883947,0,1.11123363900808,0.412070114477788,0.962757628775446,1.26348605881899,1.52087579934144,0.377252682772152,0.37456602987953,0.960377286073039,0.689225627467359,0.476293691283074,0.579421629724277,0.77163688185482,0,0.294397840268795,0.342869252385415,1.24233064311536,0.476872379894642,0.872078499793971,0.470546902076653,0.846146078916765,1.64635175585495,0.789209134313529,0.407412341537585,0.561142271657738,0.830445126869219,0.591026894253381,0.818462086339379,0.464810523557898,1.73615949883027,0.249810577937946,1.16965804222704,1.28922632428979,0.765153328275374,1.98532277207564,4.63735671240843
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,37.3082933233542,65.3995113669138,9.79386629379405,324.926030318985,362.667676887179,236.385036051503,1.78590909317247,1.48936426801328,0.522399578277871,17.2791816616879,12.6175104586944,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,9.37602413428561,16.7527598071615,17.0587131528994,12.294818729252,17.9638830621527,0,0,0,0,0,0,0,0,0,250.331648238143,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,1.53224805702225,0.46081959976873,0,0,0,0.558365998002762,0,0.15279824777681,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0.289864488701678,4.30211938490693,0,1.07940638327563,2.59910566979068,0.448026887097336,7.44355426698285,0,0,0,0,0,0,0,0,0,0,6.62266502370548,743.151726067383,1.33597925158342,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.628332956648377,0,14.0261376212314,15.9229899350977,1.94120219936891,6.8460870722722,5.33362778448744,3.72783522436244,0,0,4.34276993854605,0.359445373517761,0,0.127070227073065,0.299581278809645,0,0,1.04294592115366,0.511430914660661,0,0.648965052271031,0.203678727700633,11.4454412961286,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.281105173679186,0.517406741478031,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.233530684734339,0.822799249567402,2.29834449710733,1.21603214318784,1.46199987425332,3.95190207523891,2.14730270016595,0.841159794256509,0.308713837137853,1.32167513193519,1.58670339998127,0.213288250535234,0.696710015581316,0.77320476793256,1.4117846723634,1.55664630691409,1.52180500890047,6.16887780007865,1.15289268306808,2.5133520880027,3.58121649674071,3.8992817423824,14.3811105384675,4.32276099749388,3.38540164532424,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.316182685621286,0.295220295959204,1.56998727841375,0.863780147452604,3.26097889795864,1.00107063429656,2.16214894624523,3.14806957338795,3.24576194221605,2.65294875727659,3.56476192493988,2.30156909960649,4.37765112292595,5.76578967694971,4.31304619582064,5.95425516269605,8.42501717409313,5.55673531483646,0.896987067609561,3.37710464954357,21.2466168691595,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.390267295715598,3.15270288212382,2.87904096543407,5.74037167166954,13.9283817508377,16.7504432409919,9.25753974921674,0,0.54390568381871,8.35999264132362,9.10591262805617,0.642202359951168,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.92792789853084,1.41940085208269,0.712262414669021,0.162886959353576,2.14461159864296,5.30980553359851,0.485561272309963,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,1.03371317267288,1.81766864738753,1.42598951353889,8.53299246426703,3.16255825724996,4.12542172992747,0.340439605753788,0,0.517434735131018,0,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,0,1.0591603543191,0.661585194164886,1.31909002353184,0.645857706783622,0.542816324353403,0.238744688006273,0.328281799490123,6.70405924248657,0.556275906031529,93.6372426772233,1.44470807574256,9.63011542322501,34.8481645458678,81.7431481771731,79.6148042758699,0,1.39951452323658,0.829199842826543,0.954670618015114,0,0.406638934253697,0.324016022465404,1.67270636811575,1.09181281873089,1.07891477107857,1.57041565878138,1.83229159388821,3.24037433229482,15.5334828271731,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.2604087696879,0.419437377702843,0.724752362478018,0.288030006257865,7.2682557744481,0.405450430580328,0.924398614483445,0.77952493786677,0.179026695667481,0.39736270956253,1.20195449519969,0.738447635872886,2.22126189885925,0.533447646584999,1.10908803650525,2.53390489923356,2.21287235772758,2.68816875017609,1.36038230169127,0,0,0,2.12508553435409,2.81523713176773,0.915758121336325,1.50057865355346,0.501572104035363,1.12950368523413,1.84130094602871,0.572895513439397,0.343706364687375,0,0,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0,0.798049746802062,0.341467211508268,0.729320151204882,0.628839487883947,0,1.11123363900808,0.412070114477788,0.962757628775446,1.26348605881899,1.52087579934144,0.377252682772152,0.37456602987953,0.960377286073039,0.689225627467359,0.476293691283074,0.579421629724277,0.77163688185482,0,0.294397840268795,0.342869252385415,1.24233064311536,0.476872379894642,0.872078499793971,0.470546902076653,0.846146078916765,1.64635175585495,0.789209134313529,0.407412341537585,0.561142271657738,0.830445126869219,0.591026894253381,0.818462086339379,0.464810523557898,1.73615949883027,0.249810577937946,1.16965804222704,1.28922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|short_description=p1@Bank1
}}
}}

Latest revision as of 16:14, 1 October 2015

Short description:p1@Bank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bank1_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: 11bp_to_ENSMUST00000163105, NM_001033350, uc008rmd.1, uc008rme.1, uc012cyj.1, uc012cyk.1_5end
EntrezGene:Bank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A137.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A365.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2324.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4362.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6236.39
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2250.33
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H9743.15
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H114.03
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.45
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B121.25
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A413.93
lung, neonate N25.CNhs11119.1359-25C716.75
lung, neonate N30.CNhs11133.1394-42H29.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G293.64
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D134.85
spleen, neonate N20.CNhs11112.824-19H181.74
spleen, neonate N25.CNhs11099.1354-25G379.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
megakaryocyte progenitor cell6.44e-076
megakaryocyte6.44e-076

Uber anatomy
Ontology termp-valuen
digestive system1.61e-10116
digestive tract1.61e-10116
primitive gut1.61e-10116
endoderm-derived structure1.94e-10118
endoderm1.94e-10118
presumptive endoderm1.94e-10118
subdivision of digestive tract1.77e-09114
exocrine gland8.59e-0925
exocrine system8.59e-0925
foregut1.52e-0780
digestive tract diverticulum2.33e-0723
sac2.33e-0723
liver7.05e-0722
epithelial sac7.05e-0722
digestive gland7.05e-0722
epithelium of foregut-midgut junction7.05e-0722
anatomical boundary7.05e-0722
hepatobiliary system7.05e-0722
foregut-midgut junction7.05e-0722
hepatic diverticulum7.05e-0722
liver primordium7.05e-0722
septum transversum7.05e-0722
liver bud7.05e-0722
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