FFCP PHASE1:Mm9::chr3:50247434..50247442,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:50247434..50247442,-
|short_description=p5@Slc7a11
|description=CAGE_peak_5_at_Slc7a11_5end
|association_with_transcript=92bp_to_ENSMUST00000029297,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26570 | |EntrezGene=26570 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTR6,Q542C8,Q8BYV9 | |UniProt=Q9WTR6,Q542C8,Q8BYV9 | ||
|association_with_transcript=92bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end | |||
|cluster_id=chr3:50247434..50247442,- | |||
|description=CAGE_peak_5_at_Slc7a11_5end | |||
|id=chr3:50247434..50247442,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.78e-08,3;CL:0002202,1.78e-08,3;CL:0000069,1.78e-08,3;CL:0002632,1.78e-08,3;CL:0002368,1.78e-08,3;CL:0000307,1.78e-08,3;CL:0000377,1.78e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.78e-09,3;DOID:4045,3.78e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.08e-16,27;UBERON:0002370,2.16e-11,23;UBERON:0000974,2.16e-11,23;UBERON:0004807,2.16e-11,23;UBERON:0005058,2.16e-11,23;UBERON:0003351,2.16e-11,23;UBERON:0009113,2.16e-11,23;UBERON:0003295,2.16e-11,23;UBERON:0009722,2.16e-11,23;UBERON:0005562,2.16e-11,23;UBERON:0007690,2.16e-11,23;UBERON:0006562,8.01e-11,24;UBERON:0003408,8.01e-11,24;UBERON:0001557,8.01e-11,24;UBERON:0001042,8.01e-11,24;UBERON:0008814,8.01e-11,24;UBERON:0009145,8.01e-11,24;UBERON:0007811,1.91e-09,36;UBERON:0000065,2.51e-09,41;UBERON:0001004,4.94e-09,42;UBERON:0004177,1.42e-08,29;UBERON:0005057,1.42e-08,29;UBERON:0003126,1.78e-08,3;UBERON:0001005,1.78e-08,3;UBERON:0007196,1.78e-08,3;UBERON:0001558,1.78e-08,3;UBERON:0000077,5.16e-08,35;UBERON:0000153,1.84e-07,43 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.171217968225505,0.319088635981346,0,0,0,0.607425802169478,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.496454756004426,0.522399578277871,0,0.22940928106717,0,0.86152399231815,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,11.3003540298965,9.37602413428561,4.18818995179039,51.7643709467293,18.442228093878,16.9928623560904,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0,0.768032666281217,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,2.28023878927589,3.53867111510348,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0.359445373517761,0,0.381210681219194,0.299581278809645,0,0,0.173824320192276,1.27857728665165,0.20778804455956,0,0,0.497627882440372,0.252722758433675,11.5743020737561,0.130120442962704,0.919608417733892,0.540186389416048,0,0.340182495756639,0.12811372028485,0.374806898238915,2.84573707812917,0.431135985865684,0,0.351902248327898,0,0.556094498451196,0,0.61734640922383,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0,0,1.31976098378028,3.98235415019888,0,0,0.188605079755898,0.885905678642318,1.84461088766356,0,0,0.712994756769443,1.8962205476149,4.21674434299995,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.469343416127421,0.21183207086382,1.10264199027481,0.16488625294148,0.322928853391811,0.0603129249281559,0.358117032009409,0.820704498725306,0.291480836629851,0,0.170870880797853,0,0,0,0.136694227721025,0,1.18984900995699,0.69975726161829,0.552799895217695,0.954670618015114,0,0,0,0.209088296014469,0.87345025498471,0.134864346384821,0.330613822901344,1.04702376793612,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,4.74016680942267,0,0,0,1.07416017400489,3.57626438606277,2.16351809135944,2.21534290761866,2.22126189885925,3.12447907285499,3.12561173924206,2.63136277997332,2.88635524920988,8.6488907614361,0.226730383615211,0,0,0,0,0,1.28206136987086,0.643105137237198,0,1.12950368523413,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.171217968225505,0.319088635981346,0,0,0,0.607425802169478,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.496454756004426,0.522399578277871,0,0.22940928106717,0,0.86152399231815,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,11.3003540298965,9.37602413428561,4.18818995179039,51.7643709467293,18.442228093878,16.9928623560904,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0,0.768032666281217,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,2.28023878927589,3.53867111510348,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0.359445373517761,0,0.381210681219194,0.299581278809645,0,0,0.173824320192276,1.27857728665165,0.20778804455956,0,0,0.497627882440372,0.252722758433675,11.5743020737561,0.130120442962704,0.919608417733892,0.540186389416048,0,0.340182495756639,0.12811372028485,0.374806898238915,2.84573707812917,0.431135985865684,0,0.351902248327898,0,0.556094498451196,0,0.61734640922383,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0,0,1.31976098378028,3.98235415019888,0,0,0.188605079755898,0.885905678642318,1.84461088766356,0,0,0.712994756769443,1.8962205476149,4.21674434299995,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.469343416127421,0.21183207086382,1.10264199027481,0.16488625294148,0.322928853391811,0.0603129249281559,0.358117032009409,0.820704498725306,0.291480836629851,0,0.170870880797853,0,0,0,0.136694227721025,0,1.18984900995699,0.69975726161829,0.552799895217695,0.954670618015114,0,0,0,0.209088296014469,0.87345025498471,0.134864346384821,0.330613822901344,1.04702376793612,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,4.74016680942267,0,0,0,1.07416017400489,3.57626438606277,2.16351809135944,2.21534290761866,2.22126189885925,3.12447907285499,3.12561173924206,2.63136277997332,2.88635524920988,8.6488907614361,0.226730383615211,0,0,0,0,0,1.28206136987086,0.643105137237198,0,1.12950368523413,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p5@Slc7a11 | |||
}} | }} |
Latest revision as of 13:39, 25 September 2015
Short description: | p5@Slc7a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc7a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 92bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end |
EntrezGene: | Slc7a11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.78e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.78e-08 | 3 |
branched duct epithelial cell | 1.78e-08 | 3 |
epithelial cell of lower respiratory tract | 1.78e-08 | 3 |
respiratory epithelial cell | 1.78e-08 | 3 |
tracheal epithelial cell | 1.78e-08 | 3 |
tracheoblast | 1.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 9.08e-16 | 27 |
thymus | 2.16e-11 | 23 |
neck | 2.16e-11 | 23 |
respiratory system epithelium | 2.16e-11 | 23 |
hemolymphoid system gland | 2.16e-11 | 23 |
pharyngeal epithelium | 2.16e-11 | 23 |
thymic region | 2.16e-11 | 23 |
pharyngeal gland | 2.16e-11 | 23 |
entire pharyngeal arch endoderm | 2.16e-11 | 23 |
thymus primordium | 2.16e-11 | 23 |
early pharyngeal endoderm | 2.16e-11 | 23 |
pharynx | 8.01e-11 | 24 |
gland of gut | 8.01e-11 | 24 |
upper respiratory tract | 8.01e-11 | 24 |
chordate pharynx | 8.01e-11 | 24 |
pharyngeal arch system | 8.01e-11 | 24 |
pharyngeal region of foregut | 8.01e-11 | 24 |
craniocervical region | 1.91e-09 | 36 |
respiratory tract | 2.51e-09 | 41 |
respiratory system | 4.94e-09 | 42 |
hemopoietic organ | 1.42e-08 | 29 |
immune organ | 1.42e-08 | 29 |
trachea | 1.78e-08 | 3 |
respiratory airway | 1.78e-08 | 3 |
tracheobronchial tree | 1.78e-08 | 3 |
lower respiratory tract | 1.78e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 5.16e-08 | 35 |
anterior region of body | 1.84e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.78e-09 | 3 |
muscle cancer | 3.78e-09 | 3 |