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FFCP PHASE1:Mm9::chr4:108453387..108453408,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:108453387..108453408,- |short_description=p3@Zfyve9 |description=CAGE_peak_3_at_Zfyve9_5end |association_with_transcript=0bp_to_ENSMUST00000106657_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr4:108453387..108453408,-
|DHSsupport=NA
|short_description=p3@Zfyve9
|DPIdataset=NA
|description=CAGE_peak_3_at_Zfyve9_5end
|association_with_transcript=0bp_to_ENSMUST00000106657_5end
|EntrezGene=230597
|EntrezGene=230597
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2A8R0
|UniProt=A2A8R0
|association_with_transcript=0bp_to_ENSMUST00000106657_5end
|cluster_id=chr4:108453387..108453408,-
|description=CAGE_peak_3_at_Zfyve9_5end
|id=chr4:108453387..108453408,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!4.01e-10!50;UBERON:0006238!4.01e-10!50;UBERON:0001049!5.33e-10!52;UBERON:0005068!5.33e-10!52;UBERON:0006241!5.33e-10!52;UBERON:0007135!5.33e-10!52;UBERON:0000033!6.21e-10!63;UBERON:0002616!1.46e-09!49;UBERON:0004121!1.44e-08!102;UBERON:0000924!1.44e-08!102;UBERON:0006601!1.44e-08!102;UBERON:0001017!2.21e-08!73;UBERON:0005743!2.21e-08!73;UBERON:0000073!3.29e-08!75;UBERON:0001016!3.29e-08!75;UBERON:0002346!5.38e-08!71;UBERON:0003075!5.38e-08!71;UBERON:0007284!5.38e-08!71;UBERON:0002020!8.88e-08!34;UBERON:0002021!1.52e-07!10;UBERON:0000411!1.52e-07!10;UBERON:0001950!1.52e-07!10;UBERON:0004111!9.59e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.86e-12,73;UBERON:0000073,3.55e-12,54;UBERON:0002021,3.59e-11,10;UBERON:0000411,3.59e-11,10;UBERON:0001950,3.59e-11,10;UBERON:0001049,9.77e-11,52;UBERON:0005068,9.77e-11,52;UBERON:0006241,9.77e-11,52;UBERON:0007135,9.77e-11,52;UBERON:0004121,1.11e-09,95;UBERON:0000924,1.11e-09,95;UBERON:0006601,1.11e-09,95;UBERON:0001017,1.69e-09,73;UBERON:0000955,2.95e-09,47;UBERON:0006238,2.95e-09,47;UBERON:0002020,5.39e-09,34;UBERON:0002346,5.77e-09,64;UBERON:0003075,5.77e-09,64;UBERON:0007284,5.77e-09,64;UBERON:0001016,6.03e-09,75;UBERON:0002616,1.59e-08,46;UBERON:0003528,1.59e-07,29;UBERON:0002791,1.59e-07,29;UBERON:0001893,1.59e-07,29
|phase1_expression=1.92178616525753,1.04692622291808,0.454999239389536,1.51232105653415,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0.274228867211478,0,1.87095238332354,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,0.430942465371778,0.190023419456374,0.756090389279792,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.755380907853464,1.21652317463417,0,0.782391344348039,0.436050312760893,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0.210324961351382,0.856952953211411,1.32521124570968,0.489963196859816,0.287536413054709,0.919218786610021,4.40463523997555,4.46905683298157,5.06901559745603,0.659431438650969,0.823388792421687,0,4.18774498502071,2.25105044012672,4.27835093775068,1.17851434189467,1.42371680799103,1.86399445825301,0.681535739998656,0.377857800533928,0.869593466105033,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0.896053774194671,1.12355536105401,0.340860645156116,0,0,1.83096445709685,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,0,0.890652834388949,0,0,0.230615497256059,0.753613202763113,0.940709657085638,0.628332956648377,0.494389935468748,1.59059292611903,0,0.647067399789637,0.662524555381181,1.45462575940567,0,4.09893115816166,5.44561437714983,0,0,0,0,5.09288173976397,4.11750542536764,1.38219787324151,4.34560800480691,4.85859368927628,4.98691306942944,6.32740925964255,1.12023300235348,0.124406970610093,0,0.841767423545896,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.512454881139399,0.468508622798644,1.55222022443409,0.431135985865684,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,3.1342694986995,2.46938563689532,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,0.817357396570186,0.493679549740441,0.492502392237286,0.810688095458557,1.31579988682799,0.219550115291051,0.805238512562231,4.20579897128254,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.80673409849337,0.667134131534611,1.14135375667535,0,0.988193728344065,1.25667604400135,1.1937388322469,0.779856348476481,1.79763881730844,1.29682829924817,0.597423819763102,0,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.379419222745544,0.885660887877613,0.470996183524124,0.370191491765402,1.48226313543574,0,0.196558995113203,0.224862112384854,0,0.72353147925725,0,0.575392274901621,0.648540907100142,0.549122826376163,0,0.372140947668503,0.936113019343682,0.757736633841335,0.358794827043824,0,0.923765950833023,0.568474235311454,0,0.509235257325564,0,0.502518772325447,0.476087281772027,0.585400943573396,1.26108115284953,1.10732344824387,1.43509291791738,0.983179888294428,1.03610989119537,1.15719246865209,0,0,0,0.275936746304732,7.06422595946285,6.44664276257117,0.491804836130026,2.52470927204373,0,1.56175497718655,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0,0.395287777946524,7.39039027770156,0.851640511249612,0.35613120733451,1.46598263418218,0.494910368917606,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0.516856586336442,0,0,0,2.10837217149998,0,0.680879211507576,0.900305470156551,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0.63549621259146,0.882113592219848,2.63818004706368,1.77610869365496,1.99032652262914,2.26807453605959,2.1338316966858,0.874442509889552,5.7481843623258,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0,0.609958401380546,1.08005340821801,0.627264888043406,0.655087691238533,1.07891477107857,0.826534557253359,0.523511883968059,0.518459893167171,0,2.25477175473676,0.448549638131936,1.15820943319968,0.583353565032143,0.258319646955462,1.35164900392623,1.5256441023948,1.0416350787516,2.20204623293993,0.966336483304024,0.864090018773596,0,0.202725215290164,0.616265742988964,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0,0.167884616364078,0.386379188064381,0.375364950902364,0.915758121336325,0.428736758158132,1.50471631210609,5.0827665835536,1.84130094602871,2.86447756719698,4.29632955859219,10.9613203163303,6.7985450765073,7.42524750254986,2.70192721934532,3.17199686288943,8.28416498802912,0.518936737920883,0.399024873401031,0,1.45864030240976,0.838452650511929,0.919217542250071,0.44449345560323,1.23621034343337,0.64183841918363,1.76888048234658,0.50695859978048,0.565879024158229,0.468207537349412,1.08842759088278,1.03383844120104,1.90517476513229,0.927074607558844,1.92909220463705,0.412085900803307,1.03039244094078,0,0.177475806159338,0.953744759789284,1.16277133305863,0.752875043322645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|phase1_expression=1.92178616525753,1.04692622291808,0.454999239389536,1.51232105653415,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0.274228867211478,0,1.87095238332354,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,0.430942465371778,0.190023419456374,0.756090389279792,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.755380907853464,1.21652317463417,0,0.782391344348039,0.436050312760893,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0.210324961351382,0.856952953211411,1.32521124570968,0.489963196859816,0.287536413054709,0.919218786610021,4.40463523997555,4.46905683298157,5.06901559745603,0.659431438650969,0.823388792421687,0,4.18774498502071,2.25105044012672,4.27835093775068,1.17851434189467,1.42371680799103,1.86399445825301,0.681535739998656,0.377857800533928,0.869593466105033,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0.896053774194671,1.12355536105401,0.340860645156116,0,0,1.83096445709685,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,0,0.890652834388949,0,0,0.230615497256059,0.753613202763113,0.940709657085638,0.628332956648377,0.494389935468748,1.59059292611903,0,0.647067399789637,0.662524555381181,1.45462575940567,0,4.09893115816166,5.44561437714983,0,0,0,0,5.09288173976397,4.11750542536764,1.38219787324151,4.34560800480691,4.85859368927628,4.98691306942944,6.32740925964255,1.12023300235348,0.124406970610093,0,0.841767423545896,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.512454881139399,0.468508622798644,1.55222022443409,0.431135985865684,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,3.1342694986995,2.46938563689532,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.771335564436891,0.697601834251224,0.536546802799238,0.817357396570186,0.493679549740441,0.492502392237286,0.810688095458557,1.31579988682799,0.219550115291051,0.805238512562231,4.20579897128254,0.720332286654991,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.80673409849337,0.667134131534611,1.14135375667535,0,0.988193728344065,1.25667604400135,1.1937388322469,0.779856348476481,1.79763881730844,1.29682829924817,0.597423819763102,0,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.379419222745544,0.885660887877613,0.470996183524124,0.370191491765402,1.48226313543574,0,0.196558995113203,0.224862112384854,0,0.72353147925725,0,0.575392274901621,0.648540907100142,0.549122826376163,0,0.372140947668503,0.936113019343682,0.757736633841335,0.358794827043824,0,0.923765950833023,0.568474235311454,0,0.509235257325564,0,0.502518772325447,0.476087281772027,0.585400943573396,1.26108115284953,1.10732344824387,1.43509291791738,0.983179888294428,1.03610989119537,1.15719246865209,0,0,0,0.275936746304732,7.06422595946285,6.44664276257117,0.491804836130026,2.52470927204373,0,1.56175497718655,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0,0.395287777946524,7.39039027770156,0.851640511249612,0.35613120733451,1.46598263418218,0.494910368917606,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0.516856586336442,0,0,0,2.10837217149998,0,0.680879211507576,0.900305470156551,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0.63549621259146,0.882113592219848,2.63818004706368,1.77610869365496,1.99032652262914,2.26807453605959,2.1338316966858,0.874442509889552,5.7481843623258,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0,0.609958401380546,1.08005340821801,0.627264888043406,0.655087691238533,1.07891477107857,0.826534557253359,0.523511883968059,0.518459893167171,0,2.25477175473676,0.448549638131936,1.15820943319968,0.583353565032143,0.258319646955462,1.35164900392623,1.5256441023948,1.0416350787516,2.20204623293993,0.966336483304024,0.864090018773596,0,0.202725215290164,0.616265742988964,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0,0.167884616364078,0.386379188064381,0.375364950902364,0.915758121336325,0.428736758158132,1.50471631210609,5.0827665835536,1.84130094602871,2.86447756719698,4.29632955859219,10.9613203163303,6.7985450765073,7.42524750254986,2.70192721934532,3.17199686288943,8.28416498802912,0.518936737920883,0.399024873401031,0,1.45864030240976,0.838452650511929,0.919217542250071,0.44449345560323,1.23621034343337,0.64183841918363,1.76888048234658,0.50695859978048,0.565879024158229,0.468207537349412,1.08842759088278,1.03383844120104,1.90517476513229,0.927074607558844,1.92909220463705,0.412085900803307,1.03039244094078,0,0.177475806159338,0.953744759789284,1.16277133305863,0.752875043322645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|short_description=p3@Zfyve9
}}
}}

Latest revision as of 03:25, 26 September 2015

Short description:p3@Zfyve9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zfyve9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000106657_5end
EntrezGene:Zfyve9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zfyve9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium2.86e-1273
regional part of nervous system3.55e-1254
occipital lobe3.59e-1110
visual cortex3.59e-1110
neocortex3.59e-1110
neural tube9.77e-1152
neural rod9.77e-1152
future spinal cord9.77e-1152
neural keel9.77e-1152
ectoderm-derived structure1.11e-0995
ectoderm1.11e-0995
presumptive ectoderm1.11e-0995
central nervous system1.69e-0973
brain2.95e-0947
future brain2.95e-0947
gray matter5.39e-0934
neurectoderm5.77e-0964
neural plate5.77e-0964
presumptive neural plate5.77e-0964
nervous system6.03e-0975
regional part of brain1.59e-0846
brain grey matter1.59e-0729
regional part of telencephalon1.59e-0729
telencephalon1.59e-0729
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