Personal tools

FFCP PHASE1:Mm9::chr5:135462061..135462140,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:135462061..135462140,+ |short_description=p1@Cldn3 |description=CAGE_peak_1_at_Cldn3_5end |association_with_transcript=0bp_to_ENSMUST00000094245,NM_009902,...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:135462061..135462140,+
|DHSsupport=NA
|short_description=p1@Cldn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Cldn3_5end
|association_with_transcript=0bp_to_ENSMUST00000094245,NM_009902,uc008zxe.2_5end
|EntrezGene=12739
|EntrezGene=12739
|HGNC=
|HGNC=
|MCL_coexpression_id=963
|TSSclassifier=NA
|UniProt=Q9Z0G9,Q545A5
|UniProt=Q9Z0G9,Q545A5
|association_with_transcript=0bp_to_ENSMUST00000094245,NM_009902,uc008zxe.2_5end
|cluster_id=chr5:135462061..135462140,+
|description=CAGE_peak_1_at_Cldn3_5end
|id=chr5:135462061..135462140,+
|ontology_enrichment_celltype=CL:0000066!2.29e-09!25;CL:0002563!7.04e-07!9;CL:0002251!7.04e-07!9;CL:0000223!7.04e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,3.86e-10,25;CL:0000223,1.60e-07,20;CL:0002563,4.33e-07,9;CL:0002251,4.33e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.41e-20!43;UBERON:0004119!2.58e-20!130;UBERON:0000925!2.58e-20!130;UBERON:0006595!2.58e-20!130;UBERON:0001007!8.38e-20!128;UBERON:0001555!8.38e-20!128;UBERON:0007026!8.38e-20!128;UBERON:0004921!1.53e-18!126;UBERON:0004185!1.53e-18!126;UBERON:0005409!1.19e-15!59;UBERON:0000466!2.82e-11!79;UBERON:0000344!7.63e-11!15;UBERON:0001242!1.59e-09!13;UBERON:0000060!1.59e-09!13;UBERON:0001262!1.59e-09!13;UBERON:0004786!1.59e-09!13;UBERON:0005177!1.75e-09!85;UBERON:0000481!4.48e-09!230;UBERON:0002108!5.57e-08!16;UBERON:0009569!9.94e-08!66;UBERON:0000485!2.12e-07!11;UBERON:0000464!3.81e-07!57;UBERON:0002100!5.62e-07!98;UBERON:0005178!5.91e-07!17;UBERON:0005181!5.91e-07!17;UBERON:0002224!5.91e-07!17;UBERON:0000915!5.91e-07!17;UBERON:0008947!5.91e-07!17;UBERON:0003258!5.91e-07!17;UBERON:0003350!7.04e-07!9;UBERON:0004808!7.04e-07!9;UBERON:0001277!7.04e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.53e-16,31;UBERON:0004119,2.50e-16,118;UBERON:0000925,2.50e-16,118;UBERON:0006595,2.50e-16,118;UBERON:0001007,7.33e-16,116;UBERON:0001555,7.33e-16,116;UBERON:0007026,7.33e-16,116;UBERON:0004921,1.06e-14,114;UBERON:0005409,1.19e-11,47;UBERON:0000344,3.29e-11,15;UBERON:0005177,4.96e-11,79;UBERON:0001242,7.72e-10,13;UBERON:0001262,7.72e-10,13;UBERON:0004786,7.72e-10,13;UBERON:0002100,5.86e-08,90;UBERON:0000485,1.25e-07,11;UBERON:0009569,3.45e-07,66;UBERON:0005178,3.61e-07,17;UBERON:0005181,3.61e-07,17;UBERON:0002224,3.61e-07,17;UBERON:0000915,3.61e-07,17;UBERON:0008947,3.61e-07,17;UBERON:0003258,3.61e-07,17;UBERON:0003350,4.33e-07,9;UBERON:0004808,4.33e-07,9;UBERON:0001277,4.33e-07,9
|phase1_expression=49.1656960611717,751.344052647544,876.783534303636,568.027788834227,700.252230464993,533.688205407898,526.095666621124,0,0,0,0,0,0,0,0,0,0,0,0,0,32.5715801278597,0,0,625.57037312222,739.156703598422,907.286503301732,793.032834928857,775.911908901886,1006.36402944096,599.327648569115,842.132479468847,0,0,0,263.143825593411,262.318270375701,250.515800133927,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,1.36100929351998,0,0,0,0,0,0,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,4.45865332926454,6.61529097825284,6.30974884054146,0.571301968807607,0.883474163806454,0.979926393719632,0.287536413054709,0,0,0.127687338085188,0,0.395658863190582,0.365950574409639,1.56274011167028,0,0,0.30559649555362,0.294628585473668,0.427115042397309,0.559198337475902,0.075726193333184,0.0755715601067855,115.366066503268,135.946972563059,80.2366173775146,186.737304306685,186.485831807481,136.648200564687,93.8168726480102,0,0,0,147.463060506184,0,0,0,335.561113567382,331.901423772379,327.074315924565,98.4265043178297,0,0.890652834388949,0.867426633830679,0.608930956624282,6.22661842591358,1.50722640552623,1.76383060703557,2.26199864393416,351.51124411828,1.87979163995885,1.76922110389975,0.647067399789637,0,0,428.701050801681,0.292780797011547,1.04723353406728,439.897049069194,0,0,0,0.149790639404823,0.915001205637253,1.13088916901578,1.04294592115366,0,0.83115217823824,0.811206315338788,20.6733908616142,57.7248343630832,266.117064630659,84.1767423545896,2.86264974517948,3.44853156650209,5.22180176435513,4.21973489940002,3.74200745332303,5.38077625196369,8.80796210861451,32.855328083855,3.01795190105979,2.45837904218165,2.28736461413134,3.5071317188412,5.56094498451196,1.39300866608867,2.88094990971121,6.36909653819178,0,0,0,0.621377317606506,1.87620847984877,1.08037236876609,3.31442629819294,1.37734962223183,2.46827380619805,1.62773761325285,4.29237442239391,1.98501082024188,0.16455984991348,0.985004784474571,0.729619285912702,0.584799949701329,0.878200461164203,0.805238512562231,1.47202963994889,5.14523061896422,511.488276058919,433.963379894876,8.53153002140936,18.8111704206955,53.0933940647025,53.4461340251858,58.4854255312009,76.8511529494739,307.969360942388,113.312880850119,118.378883344927,123.154056193472,123.412267146403,284.026933134734,351.656607146127,335.1547628871,29.7778604496338,16.3375373031912,15.7790829942313,13.8482902934814,15.7101514605777,19.147078830057,11.9517055164846,9.44704947069454,8.63493003127561,10.1185674415876,173.721239473069,0.83422552858047,0.786235980452812,1.34917267430912,1.62288097110802,3.37648023653384,10.1850340712568,16.1109836972454,21.2397147075296,101.038600053214,84.8232418511392,168.951990241501,196.583734062173,174.532004661454,140.109379960613,143.768169366283,128.588220355957,17.6227012946551,40.9042090869485,50.5840355610061,84.9578698804378,140.537749993683,173.533814205904,253.868875862996,60.5318953367773,74.6336004116371,57.0848071793804,84.7173337080365,80.4712015495073,108.776092053297,0,0,63.4375912194557,120.860294881473,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.780877488593277,2.58508077279359,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0,0,31.6526390014439,31.6956774527714,35.0206962610189,177.012941949531,92.921596837974,128.916517798295,129.092158823949,122.404696761578,137.020078296679,139.882992314487,109.315168010158,113.058989867504,115.861647975034,85.9619981585419,122.285585946999,96.9474106532956,30.6395645178409,17.6459872150684,36.9965835618678,31.2932071146125,25.3596534108451,34.4251817971996,27.9733335023606,84.0323259556294,26.0485595950719,28.5973295666157,157.898333007353,6.26567761177624,1.29171541356724,5.85035371803112,15.757149408414,24.6211349617592,250.965000338301,0.18542530201051,0.170870880797853,8.46186158649212,0.925972636848558,0,0,0,0.339956859987711,0.139951452323658,0,7.63736494412091,13.4442797271983,38.4273792869744,27.5413619095593,13.381650944926,17.9057302271866,7.68726774393478,21.655205400038,0,389.752224688421,150.985453080123,6.76431526421028,0.448549638131936,0.165458490457098,0.388902376688095,1.42075805825504,0.337912250981556,0.58678619322877,13.150642869239,0.629156066554265,5.55643477899814,10.657110231541,1.58005560314089,2.43270258348197,2.46506297195585,1.42912905275575,1.61124026100733,1.39076948346885,2.04332264183947,1.77227432609493,1.21159739937777,0.990688486514998,1.31074040677893,2.33898913775406,1.15454209968395,1.28564592399726,12.923631866067,49.9468395091646,15.9690664764867,27.3651924673448,5.02292944483695,66.0642313588161,184.983140509938,36.8713612015993,343.075319160189,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0,1.03787347584177,3.99024873401031,4.09760653809922,9.72426868273176,4.40187641518763,4.22840069435032,13.5570503958985,12.3621034343337,14.4413644316317,12.3821633764261,16.7296337927558,14.7128546281139,12.2670374785546,13.701382614642,12.6358031702349,10.4784612082276,12.7472758539341,12.1532808892134,14.835092428919,11.9231125308862,11.6575545811041,10.4710725634009,13.8292990169446,11.3370204973216,11.5754537910857,13.5383372626682,13.9025259383307,7.3659519202596,12.6297825876651,16.8342681497322,13.1684870117833,12.0175468498187,11.0492381655816,11.7751999301334,16.2041553224159,18.2361721894701,17.5448706334056,24.2804291074577,5.16478496585877,10.3677966986172,2.31867835620421
|phase1_expression=49.1656960611717,751.344052647544,876.783534303636,568.027788834227,700.252230464993,533.688205407898,526.095666621124,0,0,0,0,0,0,0,0,0,0,0,0,0,32.5715801278597,0,0,625.57037312222,739.156703598422,907.286503301732,793.032834928857,775.911908901886,1006.36402944096,599.327648569115,842.132479468847,0,0,0,263.143825593411,262.318270375701,250.515800133927,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,1.36100929351998,0,0,0,0,0,0,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,4.45865332926454,6.61529097825284,6.30974884054146,0.571301968807607,0.883474163806454,0.979926393719632,0.287536413054709,0,0,0.127687338085188,0,0.395658863190582,0.365950574409639,1.56274011167028,0,0,0.30559649555362,0.294628585473668,0.427115042397309,0.559198337475902,0.075726193333184,0.0755715601067855,115.366066503268,135.946972563059,80.2366173775146,186.737304306685,186.485831807481,136.648200564687,93.8168726480102,0,0,0,147.463060506184,0,0,0,335.561113567382,331.901423772379,327.074315924565,98.4265043178297,0,0.890652834388949,0.867426633830679,0.608930956624282,6.22661842591358,1.50722640552623,1.76383060703557,2.26199864393416,351.51124411828,1.87979163995885,1.76922110389975,0.647067399789637,0,0,428.701050801681,0.292780797011547,1.04723353406728,439.897049069194,0,0,0,0.149790639404823,0.915001205637253,1.13088916901578,1.04294592115366,0,0.83115217823824,0.811206315338788,20.6733908616142,57.7248343630832,266.117064630659,84.1767423545896,2.86264974517948,3.44853156650209,5.22180176435513,4.21973489940002,3.74200745332303,5.38077625196369,8.80796210861451,32.855328083855,3.01795190105979,2.45837904218165,2.28736461413134,3.5071317188412,5.56094498451196,1.39300866608867,2.88094990971121,6.36909653819178,0,0,0,0.621377317606506,1.87620847984877,1.08037236876609,3.31442629819294,1.37734962223183,2.46827380619805,1.62773761325285,4.29237442239391,1.98501082024188,0.16455984991348,0.985004784474571,0.729619285912702,0.584799949701329,0.878200461164203,0.805238512562231,1.47202963994889,5.14523061896422,511.488276058919,433.963379894876,8.53153002140936,18.8111704206955,53.0933940647025,53.4461340251858,58.4854255312009,76.8511529494739,307.969360942388,113.312880850119,118.378883344927,123.154056193472,123.412267146403,284.026933134734,351.656607146127,335.1547628871,29.7778604496338,16.3375373031912,15.7790829942313,13.8482902934814,15.7101514605777,19.147078830057,11.9517055164846,9.44704947069454,8.63493003127561,10.1185674415876,173.721239473069,0.83422552858047,0.786235980452812,1.34917267430912,1.62288097110802,3.37648023653384,10.1850340712568,16.1109836972454,21.2397147075296,101.038600053214,84.8232418511392,168.951990241501,196.583734062173,174.532004661454,140.109379960613,143.768169366283,128.588220355957,17.6227012946551,40.9042090869485,50.5840355610061,84.9578698804378,140.537749993683,173.533814205904,253.868875862996,60.5318953367773,74.6336004116371,57.0848071793804,84.7173337080365,80.4712015495073,108.776092053297,0,0,63.4375912194557,120.860294881473,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.780877488593277,2.58508077279359,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0,0,31.6526390014439,31.6956774527714,35.0206962610189,177.012941949531,92.921596837974,128.916517798295,129.092158823949,122.404696761578,137.020078296679,139.882992314487,109.315168010158,113.058989867504,115.861647975034,85.9619981585419,122.285585946999,96.9474106532956,30.6395645178409,17.6459872150684,36.9965835618678,31.2932071146125,25.3596534108451,34.4251817971996,27.9733335023606,84.0323259556294,26.0485595950719,28.5973295666157,157.898333007353,6.26567761177624,1.29171541356724,5.85035371803112,15.757149408414,24.6211349617592,250.965000338301,0.18542530201051,0.170870880797853,8.46186158649212,0.925972636848558,0,0,0,0.339956859987711,0.139951452323658,0,7.63736494412091,13.4442797271983,38.4273792869744,27.5413619095593,13.381650944926,17.9057302271866,7.68726774393478,21.655205400038,0,389.752224688421,150.985453080123,6.76431526421028,0.448549638131936,0.165458490457098,0.388902376688095,1.42075805825504,0.337912250981556,0.58678619322877,13.150642869239,0.629156066554265,5.55643477899814,10.657110231541,1.58005560314089,2.43270258348197,2.46506297195585,1.42912905275575,1.61124026100733,1.39076948346885,2.04332264183947,1.77227432609493,1.21159739937777,0.990688486514998,1.31074040677893,2.33898913775406,1.15454209968395,1.28564592399726,12.923631866067,49.9468395091646,15.9690664764867,27.3651924673448,5.02292944483695,66.0642313588161,184.983140509938,36.8713612015993,343.075319160189,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0,1.03787347584177,3.99024873401031,4.09760653809922,9.72426868273176,4.40187641518763,4.22840069435032,13.5570503958985,12.3621034343337,14.4413644316317,12.3821633764261,16.7296337927558,14.7128546281139,12.2670374785546,13.701382614642,12.6358031702349,10.4784612082276,12.7472758539341,12.1532808892134,14.835092428919,11.9231125308862,11.6575545811041,10.4710725634009,13.8292990169446,11.3370204973216,11.5754537910857,13.5383372626682,13.9025259383307,7.3659519202596,12.6297825876651,16.8342681497322,13.1684870117833,12.0175468498187,11.0492381655816,11.7751999301334,16.2041553224159,18.2361721894701,17.5448706334056,24.2804291074577,5.16478496585877,10.3677966986172,2.31867835620421
|short_description=p1@Cldn3
}}
}}

Latest revision as of 23:59, 1 October 2015

Short description:p1@Cldn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cldn3_5end
Coexpression cluster:MCL_coexpression_mm9:963
Association with transcript: 0bp_to_ENSMUST00000094245, NM_009902, uc008zxe.2_5end
EntrezGene:Cldn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cldn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G749.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5751.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6876.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I3568.03
CD326+ enterocyte, pool2.CNhs13197.11849-124I4700.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7533.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8526.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1625.57
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2739.16
GP2+ M cell, pool1.CNhs13228.11845-124H9907.29
GP2+ M cell, pool2.CNhs13231.11846-124I1793.03
GP2+ M cell, pool3.CNhs13240.11847-124I2775.91
Ileum epithelium, pool1.CNhs13199.10252-104B91006.36
Ileum epithelium, pool2.CNhs13232.10253-104C1599.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8842.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5263.14
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6262.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7250.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3115.37
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7135.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C8186.74
Mouse hepatocyte, donor6.CNhs13090.11822-124F4186.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F6136.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A793.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6147.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1335.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2331.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3327.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B698.43
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A8351.51
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4428.70
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H7439.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A257.72
epididymis, adult.CNhs10490.58-23B2266.12
eyeball, adult.CNhs10484.31-12G484.18
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A232.86
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I3511.49
intestine, adult.CNhs10496.178-9A3433.96
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D518.81
intestine, embryo E15.CNhs10602.976-16D853.09
intestine, embryo E16.CNhs10585.463-22H453.45
intestine, embryo E17.CNhs10582.482-18D358.49
intestine, embryo E18.CNhs10526.1289-20F776.85
intestine, neonate N00.CNhs11126.644-26D1307.97
intestine, neonate N01.CNhs11192.1322-23E9113.31
intestine, neonate N06.CNhs11102.688-20B8118.38
intestine, neonate N07.CNhs11095.720-20F2123.15
intestine, neonate N10.CNhs11098.755-23A5123.41
intestine, neonate N20.CNhs11187.827-18D1284.03
intestine, neonate N25.CNhs11121.1352-25E3351.66
intestine, neonate N30.CNhs11131.1384-42G1335.15
kidney, embryo E14.CNhs10606.411-4I929.78
kidney, embryo E15.CNhs10997.434-16F816.34
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C715.71
kidney, neonate N00.CNhs11214.646-21G719.15
kidney, neonate N10.CNhs11206.758-6D511.95
kidney, neonate N20.CNhs11113.832-19I19.45
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B2173.72
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A310.19
liver, embryo E18.CNhs10579.499-43G416.11
liver, neonate N00.CNhs11117.641-24F421.24
liver, neonate N03.CNhs11123.1345-25G2101.04
liver, neonate N06.CNhs11101.684-20A884.82
liver, neonate N07.CNhs11103.716-20H2168.95
liver, neonate N10.CNhs11115.751-24B9196.58
liver, neonate N20.CNhs11220.823-25A3174.53
liver, neonate N25.CNhs11198.1368-26H1140.11
liver, neonate N30.CNhs11106.1382-42D1143.77
lung, adult.CNhs10474.28-22B1128.59
lung, embryo E12.CNhs10522.354-16G217.62
lung, embryo E14.CNhs10604.404-26F840.90
lung, embryo E15.CNhs11020.432-17C550.58
lung, embryo E16.CNhs10998.458-17B684.96
lung, embryo E17.CNhs10605.480-44A6140.54
lung, embryo E18.CNhs10583.1287-20I6173.53
lung, neonate N00.CNhs11224.640-42C6253.87
lung, neonate N06.CNhs11212.683-20E560.53
lung, neonate N07.CNhs11111.715-19A374.63
lung, neonate N10.CNhs11219.750-23E657.08
lung, neonate N20.CNhs11109.822-18A484.72
lung, neonate N25.CNhs11119.1359-25C780.47
lung, neonate N30.CNhs11133.1394-42H2108.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B663.44
mammary gland, adult pregnant day19.CNhs10476.588-5H2120.86
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I731.65
ovary, embryo E18.CNhs11040.505-44H731.70
ovary, neonate N00.CNhs11217.1299-22I435.02
oviduct, adult pregnant day01.CNhs10500.988-6G6177.01
pancreas, adult.CNhs10486.34-16E492.92
pancreas, embryo E14.CNhs11012.405-44F4128.92
pancreas, embryo E15.CNhs11042.1556-45F2129.09
pancreas, embryo E16.CNhs11003.460-26E5122.40
pancreas, embryo E17.CNhs10599.1558-45G3137.02
pancreas, embryo E18.CNhs10580.1535-43I7139.88
pancreas, neonate N00.CNhs11105.645-26G9109.32
pancreas, neonate N01.CNhs11138.1531-43D7113.06
pancreas, neonate N02.CNhs11139.1539-43D8115.86
pancreas, neonate N16.CNhs11136.787-43B685.96
pancreas, neonate N25.CNhs11094.1555-45E2122.29
pancreas, neonate N30.CNhs11182.1548-44H596.95
pituitary gland, adult.CNhs10493.21-1G830.64
pituitary gland, embryo E12.CNhs11018.346-16E617.65
pituitary gland, embryo E13.CNhs11009.370-44C737.00
pituitary gland, embryo E14.CNhs11037.398-44A531.29
pituitary gland, embryo E15.CNhs10592.427-16B925.36
pituitary gland, embryo E16.CNhs11036.449-43F634.43
pituitary gland, embryo E17.CNhs11039.1265-44F527.97
pituitary gland, neonate N00.CNhs11190.1308-22E984.03
placenta, adult pregnant day10.CNhs10472.539-13I726.05
placenta, adult pregnant day17.CNhs10464.577-18G328.60
prostate, adult.CNhs10470.859-1F8157.90
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H35.85
skin, neonate N06.CNhs11097.693-20I515.76
skin, neonate N10.CNhs11108.762-6C424.62
small intestine, neonate N16.CNhs11114.790-21I1250.97
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E313.44
stomach, embryo E15.CNhs10603.1252-16G838.43
stomach, embryo E16.CNhs11022.459-17D427.54
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C617.91
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A921.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I1389.75
submandibular gland, adult.CNhs10469.59-29C1150.99
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I413.15
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H349.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G527.37
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F566.06
uterus, adult.CNhs10509.92-27E5184.98
vagina, adult.CNhs10502.89-27D536.87
vesicular gland, adult.CNhs10491.51-27F8343.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.78
whole body, embryo E17.5.CNhs10513.490-9F916.20
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B317.54
whole body, neonate N00.CNhs10525.657-19C224.28
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.86e-1025
endodermal cell1.60e-0720
intestinal epithelial cell4.33e-079
epithelial cell of alimentary canal4.33e-079

Uber anatomy
Ontology termp-valuen
intestine1.53e-1631
endoderm-derived structure2.50e-16118
endoderm2.50e-16118
presumptive endoderm2.50e-16118
digestive system7.33e-16116
digestive tract7.33e-16116
primitive gut7.33e-16116
subdivision of digestive tract1.06e-14114
gastrointestinal system1.19e-1147
mucosa3.29e-1115
trunk region element4.96e-1179
intestinal mucosa7.72e-1013
wall of intestine7.72e-1013
gastrointestinal system mucosa7.72e-1013
trunk5.86e-0890
simple columnar epithelium1.25e-0711
subdivision of trunk3.45e-0766
thoracic cavity element3.61e-0717
thoracic segment organ3.61e-0717
thoracic cavity3.61e-0717
thoracic segment of trunk3.61e-0717
respiratory primordium3.61e-0717
endoderm of foregut3.61e-0717
epithelium of mucosa4.33e-079
gastrointestinal system epithelium4.33e-079
intestinal epithelium4.33e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:135462061..135462140,%2B&oldid=4329144"