FFCP PHASE1:Mm9::chr5:32000038..32000082,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:32000038..32000082,+
|short_description=p2@Bre
|description=CAGE_peak_2_at_Bre_5end
|association_with_transcript=0bp_to_ENSMUST00000080598_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107976 | |EntrezGene=107976 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3W0 | |UniProt=Q8K3W0 | ||
|association_with_transcript=0bp_to_ENSMUST00000080598_5end | |||
|cluster_id=chr5:32000038..32000082,+ | |||
|description=CAGE_peak_2_at_Bre_5end | |||
|id=chr5:32000038..32000082,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.55e-16,9;CL:0002251,3.55e-16,9;CL:0000239,1.48e-14,6;CL:0000677,1.48e-14,6;CL:0000584,1.48e-14,6;CL:0000075,2.28e-12,7;CL:0000066,2.05e-09,25;CL:0002076,3.87e-09,15;CL:0000682,1.54e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.11e-08!15;UBERON:0001242!2.40e-07!13;UBERON:0000060!2.40e-07!13;UBERON:0001262!2.40e-07!13;UBERON:0004786!2.40e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.97e-18,15;UBERON:0003350,3.55e-16,9;UBERON:0004808,3.55e-16,9;UBERON:0001277,3.55e-16,9;UBERON:0001242,9.32e-14,13;UBERON:0001262,9.32e-14,13;UBERON:0004786,9.32e-14,13;UBERON:0000485,5.63e-13,11;UBERON:0004923,3.13e-12,24;UBERON:0000160,8.40e-09,31 | |||
|phase1_expression=0.160148847104794,4.18770489167233,1.81999695755814,3.62957053568196,2.50447864973174,1.00727563147134,2.10251376535973,0.387369970324729,1.40788722151667,2.10658073689794,0.68487187290202,0.558405112967355,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0.137114433605739,0,8.07911256435163,0.198581902401771,0,3.19984845586813,2.75291137280604,1.72269589234506,1.7230479846363,1.29282739611533,0.570070258369122,0.756090389279792,0.221730510655305,0.635030673459631,0,0,1.73310971850765,1.16364251750945,0.612508068787107,1.25559489221072,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0.629484089877886,0.912392380975631,1.10128051297009,0.782391344348039,1.09012578190223,1.75748946187577,0.777719596297134,0.419959264876088,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0.633831403506179,0,0,0,1.97773272513395,0,0.599200221036809,1.92109152660777,0,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,0,0,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0.589257170947335,0,0,1.28734528666413,0.906858721281426,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.983110940922263,0.340860645156116,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,1.1418387971906,0.258937883647172,0.445326417194474,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,2.04365644166873,0.479260498023681,0,0.508280908292259,0,0,0.251308704225729,0.521472960576829,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0.505445516867349,0,0.780722657776222,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0.536546802799238,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0.205809224758569,2.31293148088659,1.32225283331772,0.213288250535234,0,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.701358198903186,0.252946148497029,1.03327103585722,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0,0.287696137450811,0.486405680325106,0,0,0,0.624075346229121,1.01031551178845,0,0.482443521363367,1.10851914099963,0.189491411770485,0,0,0.234690248288502,0.670025029767263,0.714130922658041,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0.578596234326046,0,0,0,0,0,0.234423373184406,0.491804836130026,0.252470927204373,0.631016438832513,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0.493647061806363,1.2178597964584,1.17335854031855,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.656563598980245,0.291480836629851,0.556275906031529,0,0.206386867963223,0.370389054739423,0,0.27338845544205,0.457556346413045,0.679913719975421,0.419854356970974,0.138199973804424,0,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.777689839750757,0,51.2960574202613,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.524296722128554,7.48910774560619,34.8516307572017,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.350630706544707,0,0.221985953374065,0,0,0.19318959403219,1.50145980360946,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0.685738504770831,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 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|phase1_expression=0.160148847104794,4.18770489167233,1.81999695755814,3.62957053568196,2.50447864973174,1.00727563147134,2.10251376535973,0.387369970324729,1.40788722151667,2.10658073689794,0.68487187290202,0.558405112967355,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0.137114433605739,0,8.07911256435163,0.198581902401771,0,3.19984845586813,2.75291137280604,1.72269589234506,1.7230479846363,1.29282739611533,0.570070258369122,0.756090389279792,0.221730510655305,0.635030673459631,0,0,1.73310971850765,1.16364251750945,0.612508068787107,1.25559489221072,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0.629484089877886,0.912392380975631,1.10128051297009,0.782391344348039,1.09012578190223,1.75748946187577,0.777719596297134,0.419959264876088,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0.633831403506179,0,0,0,1.97773272513395,0,0.599200221036809,1.92109152660777,0,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,0,0,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0.589257170947335,0,0,1.28734528666413,0.906858721281426,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.983110940922263,0.340860645156116,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,1.1418387971906,0.258937883647172,0.445326417194474,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,2.04365644166873,0.479260498023681,0,0.508280908292259,0,0,0.251308704225729,0.521472960576829,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0.505445516867349,0,0.780722657776222,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0.536546802799238,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0.205809224758569,2.31293148088659,1.32225283331772,0.213288250535234,0,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,1.79763881730844,0.864552199498777,0.995706366271836,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.701358198903186,0.252946148497029,1.03327103585722,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0,0.287696137450811,0.486405680325106,0,0,0,0.624075346229121,1.01031551178845,0,0.482443521363367,1.10851914099963,0.189491411770485,0,0,0.234690248288502,0.670025029767263,0.714130922658041,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0.578596234326046,0,0,0,0,0,0.234423373184406,0.491804836130026,0.252470927204373,0.631016438832513,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.35613120733451,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0.493647061806363,1.2178597964584,1.17335854031855,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.656563598980245,0.291480836629851,0.556275906031529,0,0.206386867963223,0.370389054739423,0,0.27338845544205,0.457556346413045,0.679913719975421,0.419854356970974,0.138199973804424,0,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.777689839750757,0,51.2960574202613,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.524296722128554,7.48910774560619,34.8516307572017,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.350630706544707,0,0.221985953374065,0,0,0.19318959403219,1.50145980360946,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0.685738504770831,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p2@Bre | |||
}} | }} |
Latest revision as of 22:36, 25 September 2015
Short description: | p2@Bre |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bre_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000080598_5end |
EntrezGene: | Bre |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.55e-16 | 9 |
epithelial cell of alimentary canal | 3.55e-16 | 9 |
brush border epithelial cell | 1.48e-14 | 6 |
gut absorptive cell | 1.48e-14 | 6 |
enterocyte | 1.48e-14 | 6 |
columnar/cuboidal epithelial cell | 2.28e-12 | 7 |
epithelial cell | 2.05e-09 | 25 |
endo-epithelial cell | 3.87e-09 | 15 |
M cell of gut | 1.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.97e-18 | 15 |
epithelium of mucosa | 3.55e-16 | 9 |
gastrointestinal system epithelium | 3.55e-16 | 9 |
intestinal epithelium | 3.55e-16 | 9 |
intestinal mucosa | 9.32e-14 | 13 |
wall of intestine | 9.32e-14 | 13 |
gastrointestinal system mucosa | 9.32e-14 | 13 |
simple columnar epithelium | 5.63e-13 | 11 |
organ component layer | 3.13e-12 | 24 |
intestine | 8.40e-09 | 31 |