FFCP PHASE1:Mm9::chr5:67490333..67490342,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:67490333..67490342,-
|short_description=p5@Phox2b
|description=CAGE_peak_5_at_Phox2b_5end
|association_with_transcript=22bp_to_NM_008888,uc008xpm.1,uc008xp...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18935 | |EntrezGene=18935 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=O35690,Q8C741 | |UniProt=O35690,Q8C741 | ||
|association_with_transcript=22bp_to_NM_008888,uc008xpm.1,uc008xpn.1_5end | |||
|cluster_id=chr5:67490333..67490342,- | |||
|description=CAGE_peak_5_at_Phox2b_5end | |||
|id=chr5:67490333..67490342,- | |||
|ontology_enrichment_celltype=CL:0000107!6.40e-17!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.53e-48,9;CL:0000540,3.02e-12,33;CL:0000047,3.02e-12,33;CL:0000031,3.02e-12,33;CL:0000404,3.02e-12,33;CL:0000393,3.52e-10,39;CL:0000211,3.52e-10,39;CL:0002319,4.03e-09,43;CL:0000221,6.91e-09,44;CL:0000133,6.91e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002342!4.53e-17!10;UBERON:0005062!4.53e-17!10;UBERON:0002410!6.40e-17!9;UBERON:0000010!2.08e-13!11;UBERON:0002369!6.72e-12!7;UBERON:0006858!6.72e-12!7;UBERON:0000013!8.44e-07!3;UBERON:0005157!8.74e-07!27;UBERON:0002005!9.55e-07!3;UBERON:0005428!9.55e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.53e-48,9;UBERON:0000010,6.24e-39,11;UBERON:0000013,2.76e-17,3;UBERON:0010313,3.99e-17,3;UBERON:0002342,3.99e-17,3;UBERON:0002005,3.99e-17,3;UBERON:0005428,3.99e-17,3;UBERON:0005062,3.99e-17,3;UBERON:0000011,1.72e-16,3;UBERON:0002369,7.80e-12,7;UBERON:0006858,7.80e-12,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7813056687779,2.77576522825817,2.74018930480927,0.461230994512117,1.3565037649736,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.853153002140936,2.32236671860439,1.28867461322093,0.605050573870028,0.889512175379481,1.52180500890047,0,0.658795818896044,0.502670417600539,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,6.94118082715765,6.63745865304285,14.2179442503647,6.21318874676635,5.56996685205985,3.39691836946599,11.7395103485719,10.2289550268959,9.88219444866309,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42351197111511,0,0.540026704109006,0.627264888043406,0.218362563746178,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7813056687779,2.77576522825817,2.74018930480927,0.461230994512117,1.3565037649736,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.853153002140936,2.32236671860439,1.28867461322093,0.605050573870028,0.889512175379481,1.52180500890047,0,0.658795818896044,0.502670417600539,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,6.94118082715765,6.63745865304285,14.2179442503647,6.21318874676635,5.56996685205985,3.39691836946599,11.7395103485719,10.2289550268959,9.88219444866309,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42351197111511,0,0.540026704109006,0.627264888043406,0.218362563746178,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p5@Phox2b | |||
}} | }} |
Latest revision as of 04:20, 26 September 2015
Short description: | p5@Phox2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Phox2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 22bp_to_NM_008888, uc008xpm.1, uc008xpn.1_5end |
EntrezGene: | Phox2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.53e-48 | 9 |
neuron | 3.02e-12 | 33 |
neuronal stem cell | 3.02e-12 | 33 |
neuroblast | 3.02e-12 | 33 |
electrically signaling cell | 3.02e-12 | 33 |
electrically responsive cell | 3.52e-10 | 39 |
electrically active cell | 3.52e-10 | 39 |
neural cell | 4.03e-09 | 43 |
ectodermal cell | 6.91e-09 | 44 |
neurectodermal cell | 6.91e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.53e-48 | 9 |
peripheral nervous system | 6.24e-39 | 11 |
sympathetic nervous system | 2.76e-17 | 3 |
neural crest-derived structure | 3.99e-17 | 3 |
neural crest | 3.99e-17 | 3 |
enteric nervous system | 3.99e-17 | 3 |
vagal neural crest | 3.99e-17 | 3 |
neural fold | 3.99e-17 | 3 |
parasympathetic nervous system | 1.72e-16 | 3 |
adrenal gland | 7.80e-12 | 7 |
adrenal/interrenal gland | 7.80e-12 | 7 |