FFCP PHASE1:Mm9::chr5:73948518..73948529,+: Difference between revisions
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|id=chr5:73948518..73948529,+
|short_description=p@chr5:73948518..73948529,+
|description=CAGE_peak_at_chr5:73948518..73948529,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:73948518..73948529,+ | |||
|description=CAGE_peak_at_chr5:73948518..73948529,+ | |||
|id=chr5:73948518..73948529,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.23e-09!9;CL:0002251!6.23e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.98e-22,3;CL:0002563,7.18e-13,9;CL:0002251,7.18e-13,9;CL:0000815,2.54e-08,1;CL:0000792,2.54e-08,1;CL:0002076,8.24e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!9.15e-18!24;UBERON:0000344!2.70e-17!15;UBERON:0001242!2.09e-14!13;UBERON:0000060!2.09e-14!13;UBERON:0001262!2.09e-14!13;UBERON:0004786!2.09e-14!13;UBERON:0005409!9.42e-13!59;UBERON:0004119!1.84e-12!130;UBERON:0000925!1.84e-12!130;UBERON:0006595!1.84e-12!130;UBERON:0001007!3.45e-11!128;UBERON:0001555!3.45e-11!128;UBERON:0007026!3.45e-11!128;UBERON:0004921!9.63e-10!126;UBERON:0004185!9.63e-10!126;UBERON:0000160!3.57e-09!43;UBERON:0003350!6.23e-09!9;UBERON:0004808!6.23e-09!9;UBERON:0001277!6.23e-09!9;UBERON:0007023!2.46e-08!51;UBERON:0000485!4.88e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.20e-28,15;UBERON:0001242,1.15e-25,13;UBERON:0001262,1.15e-25,13;UBERON:0004786,1.15e-25,13;UBERON:0004923,1.09e-17,24;UBERON:0000160,1.33e-13,31;UBERON:0003350,7.18e-13,9;UBERON:0004808,7.18e-13,9;UBERON:0001277,7.18e-13,9;UBERON:0005409,4.83e-11,47;UBERON:0000485,1.41e-10,11;UBERON:0000331,5.56e-10,3;UBERON:0002116,5.56e-10,3;UBERON:0001204,5.56e-10,3;UBERON:0001168,5.56e-10,3;UBERON:0002465,1.26e-09,3;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0002108,1.05e-07,4;UBERON:0007023,1.17e-07,51 | |||
|phase1_expression=0,0.348975407639361,0,0.90739263392049,2.00358291978539,0,0.700837921786577,2.1950964985068,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,0.91763712426868,0,0,0,1.71021077510736,2.01624103807945,0.221730510655305,0,0,0,6.06588401477677,3.98963148860382,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,1.98251269790279,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,1.29327233116623,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0.81931657357869,0,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0,0,0,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0,0.436725127492355,0,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.563047426353546,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0.90739263392049,2.00358291978539,0,0.700837921786577,2.1950964985068,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,0.91763712426868,0,0,0,1.71021077510736,2.01624103807945,0.221730510655305,0,0,0,6.06588401477677,3.98963148860382,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,1.98251269790279,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,1.29327233116623,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0.81931657357869,0,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0,0,0,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0,0.436725127492355,0,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.563047426353546,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:73948518..73948529,+ | |||
}} | }} |
Latest revision as of 14:30, 4 August 2015
Short description: | p@chr5:73948518..73948529, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73948518..73948529, + |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.98e-22 | 3 |
intestinal epithelial cell | 7.18e-13 | 9 |
epithelial cell of alimentary canal | 7.18e-13 | 9 |
regulatory T cell | 2.54e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.54e-08 | 1 |
endo-epithelial cell | 8.24e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.20e-28 | 15 |
intestinal mucosa | 1.15e-25 | 13 |
wall of intestine | 1.15e-25 | 13 |
gastrointestinal system mucosa | 1.15e-25 | 13 |
organ component layer | 1.09e-17 | 24 |
intestine | 1.33e-13 | 31 |
epithelium of mucosa | 7.18e-13 | 9 |
gastrointestinal system epithelium | 7.18e-13 | 9 |
intestinal epithelium | 7.18e-13 | 9 |
gastrointestinal system | 4.83e-11 | 47 |
simple columnar epithelium | 1.41e-10 | 11 |
ileal mucosa | 5.56e-10 | 3 |
ileum | 5.56e-10 | 3 |
mucosa of small intestine | 5.56e-10 | 3 |
wall of small intestine | 5.56e-10 | 3 |
lymphoid system | 1.26e-09 | 3 |
lymph node | 7.68e-08 | 1 |
axillary lymph node | 7.68e-08 | 1 |
peripheral lymph node | 7.68e-08 | 1 |
shoulder | 7.68e-08 | 1 |
small intestine | 1.05e-07 | 4 |
adult organism | 1.17e-07 | 51 |