FFCP PHASE1:Mm9::chr6:125046187..125046207,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:125046187..125046207,+
|short_description=p1@Chd4
|description=CAGE_peak_1_at_Chd4_5end
|association_with_transcript=0bp_to_ENSMUST00000155932_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107932 | |EntrezGene=107932 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000155932_5end | |||
|cluster_id=chr6:125046187..125046207,+ | |||
|description=CAGE_peak_1_at_Chd4_5end | |||
|id=chr6:125046187..125046207,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.09e-21!121;CL:0000012!1.09e-21!121;CL:0002371!3.72e-20!118;CL:0000548!4.74e-20!115;CL:0000004!4.74e-20!115;CL:0000255!4.74e-20!115;CL:0000034!2.90e-15!97;CL:0000063!2.94e-14!66;CL:0000988!5.59e-13!32;CL:0002032!5.59e-13!32;CL:0000037!5.59e-13!32;CL:0000566!5.59e-13!32;CL:0000837!5.59e-13!32;CL:0000723!2.13e-12!91;CL:0000048!2.13e-12!91;CL:0002031!1.54e-10!25;CL:0000838!2.49e-08!12;CL:0000542!3.56e-08!13;CL:0000051!3.56e-08!13;CL:0002076!7.44e-08!15;CL:0000738!7.57e-08!17;CL:0002087!7.57e-08!17;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0002320!1.06e-07!46;CL:0000134!1.06e-07!46;CL:0002321!1.18e-07!70;CL:0000220!1.18e-07!70;CL:0000219!3.35e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.90e-15,97;CL:0000988,5.59e-13,32;CL:0002032,5.59e-13,32;CL:0000037,5.59e-13,32;CL:0000837,5.59e-13,32;CL:0000723,2.13e-12,91;CL:0000048,2.13e-12,91;CL:0002031,1.54e-10,25;CL:0000838,2.49e-08,12;CL:0000542,3.56e-08,13;CL:0000051,3.56e-08,13;CL:0002076,7.44e-08,15;CL:0000738,7.57e-08,17;CL:0002087,7.57e-08,17;CL:0000084,1.03e-07,11;CL:0000827,1.03e-07,11;CL:0002320,1.06e-07,46;CL:0000134,1.06e-07,46;CL:0002321,1.18e-07,70;CL:0000219,3.35e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.52e-10!48;UBERON:0002390!1.78e-09!45;UBERON:0003061!1.78e-09!45;UBERON:0002384!1.06e-07!46;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0000072!1.50e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.52e-10,48;UBERON:0002405,8.52e-10,48;UBERON:0002390,1.78e-09,45;UBERON:0003061,1.78e-09,45;UBERON:0002384,1.06e-07,46;UBERON:0002370,1.28e-07,23;UBERON:0000974,1.28e-07,23;UBERON:0004807,1.28e-07,23;UBERON:0005058,1.28e-07,23;UBERON:0003351,1.28e-07,23;UBERON:0009113,1.28e-07,23;UBERON:0003295,1.28e-07,23;UBERON:0009722,1.28e-07,23;UBERON:0005562,1.28e-07,23;UBERON:0007690,1.28e-07,23;UBERON:0000072,1.50e-07,27 | |||
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| ||
|short_description=p1@Chd4 | |||
}} | }} |
Latest revision as of 16:44, 26 September 2015
Short description: | p1@Chd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000155932_5end |
EntrezGene: | Chd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.90e-15 | 97 |
hematopoietic cell | 5.59e-13 | 32 |
hematopoietic oligopotent progenitor cell | 5.59e-13 | 32 |
hematopoietic stem cell | 5.59e-13 | 32 |
hematopoietic multipotent progenitor cell | 5.59e-13 | 32 |
somatic stem cell | 2.13e-12 | 91 |
multi fate stem cell | 2.13e-12 | 91 |
hematopoietic lineage restricted progenitor cell | 1.54e-10 | 25 |
lymphoid lineage restricted progenitor cell | 2.49e-08 | 12 |
lymphocyte | 3.56e-08 | 13 |
common lymphoid progenitor | 3.56e-08 | 13 |
endo-epithelial cell | 7.44e-08 | 15 |
leukocyte | 7.57e-08 | 17 |
nongranular leukocyte | 7.57e-08 | 17 |
T cell | 1.03e-07 | 11 |
pro-T cell | 1.03e-07 | 11 |
connective tissue cell | 1.06e-07 | 46 |
mesenchymal cell | 1.06e-07 | 46 |
embryonic cell | 1.18e-07 | 70 |
motile cell | 3.35e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.52e-10 | 48 |
immune system | 8.52e-10 | 48 |
hematopoietic system | 1.78e-09 | 45 |
blood island | 1.78e-09 | 45 |
connective tissue | 1.06e-07 | 46 |
thymus | 1.28e-07 | 23 |
neck | 1.28e-07 | 23 |
respiratory system epithelium | 1.28e-07 | 23 |
hemolymphoid system gland | 1.28e-07 | 23 |
pharyngeal epithelium | 1.28e-07 | 23 |
thymic region | 1.28e-07 | 23 |
pharyngeal gland | 1.28e-07 | 23 |
entire pharyngeal arch endoderm | 1.28e-07 | 23 |
thymus primordium | 1.28e-07 | 23 |
early pharyngeal endoderm | 1.28e-07 | 23 |
segment of respiratory tract | 1.50e-07 | 27 |