FFCP PHASE1:Mm9::chr6:54766777..54766813,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:54766777..54766813,+
|short_description=p3@Znrf2
|description=CAGE_peak_3_at_Znrf2_5end
|association_with_transcript=-96bp_to_ENSMUST00000079869,NM_199143,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=387524 | |EntrezGene=387524 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=452 | |||
|TSSclassifier=NA | |||
|UniProt=Q71FD5 | |UniProt=Q71FD5 | ||
|association_with_transcript=-96bp_to_ENSMUST00000079869,NM_199143,uc009cae.2_5end | |||
|cluster_id=chr6:54766777..54766813,+ | |||
|description=CAGE_peak_3_at_Znrf2_5end | |||
|id=chr6:54766777..54766813,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.40e-07!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.81e-10!130;UBERON:0000925!4.81e-10!130;UBERON:0006595!4.81e-10!130;UBERON:0001007!7.27e-10!128;UBERON:0001555!7.27e-10!128;UBERON:0007026!7.27e-10!128;UBERON:0004921!3.39e-09!126;UBERON:0004185!3.39e-09!126;UBERON:0000344!8.36e-09!15;UBERON:0000160!4.53e-08!43;UBERON:0001242!5.11e-08!13;UBERON:0000060!5.11e-08!13;UBERON:0001262!5.11e-08!13;UBERON:0004786!5.11e-08!13;UBERON:0002405!8.91e-08!70;UBERON:0005409!2.56e-07!59;UBERON:0004923!4.75e-07!24;UBERON:0003929!5.59e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.63e-10,118;UBERON:0000925,2.63e-10,118;UBERON:0006595,2.63e-10,118;UBERON:0001007,3.90e-10,116;UBERON:0001555,3.90e-10,116;UBERON:0007026,3.90e-10,116;UBERON:0000160,8.23e-10,31;UBERON:0004921,1.88e-09,114;UBERON:0000344,8.28e-09,15;UBERON:0005409,3.43e-08,47;UBERON:0001242,5.07e-08,13;UBERON:0001262,5.07e-08,13;UBERON:0004786,5.07e-08,13;UBERON:0003929,4.34e-07,55;UBERON:0004923,4.71e-07,24 | |||
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2357,4.05001933054146,9.16145796944104,13.0911123024711,7.45607175704311,2.81846469342095,1.64468200648377,1.65458490457098,1.36115831840833,2.19571699912143,1.85851738039856,2.11243029562357,1.95306577265925,1.46803082195995,4.83168241652012,6.04863013141517,4.74016680942267,2.43270258348197,2.46506297195585,4.02754551231165,4.11761400035207,4.56967115996909,5.04820887983869,6.35064966850682,4.54349024766664,4.95344243257499,2.21817607301049,4.19068887180935,4.2333210321745,5.02570679380746,3.62768613784338,3.55177525398503,4.93426211352116,2.68615386182526,4.44336066274038,4.129014459926,4.02933573387983,4.28736758158132,8.02515366456581,2.82375921308533,3.68260189205742,3.43737308063638,3.09335728218638,1.37016503954128,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,2.5888015587591,0.726511433089237,1.59609949360412,1.19513524027894,2.18796045361465,1.67690530102386,3.30918315210025,2.22246727801615,1.64828045791115,1.60459604795908,1.76888048234658,1.77435509923168,2.64076877940507,3.09016974650612,2.94515701062399,2.98664438569189,4.28664322154766,3.36064545240081,1.92909220463705,2.06042950401653,1.76638704161277,1.71434626192708,1.59728225543404,1.90748951957857,1.59881058295561,2.63506265162926,2.70766745253365,2.37806364734604,2.89376682581627,2.30866993537965,2.24456908663095,2.25406534435931,2.56111654176465,2.04615521584845,2.16911577660352,2.70069255373598,1.74867404556562,4.44470056046276,4.72716318906256,3.06061331310149,2.8676884485537,3.2461496986859 | |phase1_expression=1.60148847104794,17.4487703819681,23.2049612088663,18.7527811010235,26.0465779572101,10.5763941304491,9.34450562382103,6.45616617207881,4.08287294239834,3.97909694747389,2.05461561870606,2.79202556483677,8.21763503669787,8.21751782738576,2.6648780945253,3.44207954562704,2.09868563438444,4.88966356305268,6.58149281307546,7.21462408056651,5.3577272795174,5.46100231604869,5.22399578277871,8.95957567643077,8.25873411841812,16.0784949952206,18.5227658348402,12.4973314957816,13.6816862008589,15.8778981748756,11.7517170647311,2.54012269383853,1.84519436275371,0,7.79899373328441,6.81562045969819,7.35009682544529,11.7188856606334,14.0640362014284,18.3233310390829,9.41170380849623,13.6609096991689,12.1377588257788,1.1330713617802,1.21652317463417,1.46837401729345,0,2.8343270329458,4.61340983742391,3.4997381833371,2.37976916763116,1.43752564364972,6.04017381807851,1.45072428402269,9.41062637598899,2.31533492432352,2.0057340795713,2.06268836910977,2.42779753031517,2.64495489636016,0.633831403506179,1.35537812827653,2.66788438833342,18.4479442042687,20.7661936139065,14.9200824138681,9.58720353658895,6.91592949578798,3.21437798156281,2.56511282830212,2.10324961351382,3.42781181284564,3.09215957332259,1.83736198822431,1.82106394934649,0.919218786610021,0,3.19218345212969,2.30409799884365,3.29715719325485,2.8361169516747,3.64639359389732,2.51264699101243,1.68828783009504,3.66715794664344,3.24091444021034,3.41692033917847,2.23679334990361,3.18050011999373,2.34271836331035,4.05810284182349,9.46466264679525,11.5595126730318,14.5719861742211,20.1430689408777,8.51251085484938,8.14577636764161,1.1930122580464,1.29893002301434,1.06001872353102,1.83096445709685,0,0,0,3.68034769719064,2.78695852022608,4.04419556011827,11.0758363327488,6.99132285847364,6.67989625791711,1.04091196059682,3.04465478312141,1.38369298353635,2.41156224884196,3.99801604261396,5.78066320116507,12.1125534189843,6.2177723475562,7.96149496754887,2.58826959915855,6.40440403535141,1.93950101254089,11.1835056730873,1.46390398505774,2.93225389538837,8.68553987709211,8.38705871541442,10.1983464268879,11.0551097553566,2.99581278809645,2.28750301409313,2.1361239859187,1.91206752211504,1.79000820131231,1.87009240103604,2.10913641988085,2.74966282395854,3.98102305952298,4.54900965180614,9.04899980311838,0.520481771850815,1.14951052216736,0.360124259610698,0.60281927134286,2.65342346690179,1.15302348256365,1.59292931751539,5.69147415625834,0.431135985865684,0.756424320671277,1.05570674498369,1.53437012699302,1.11218899690239,2.43776516565517,1.85203922767149,0.59710280045548,7.72434506044558,10.808612098818,13.6398479709884,2.07125772535502,0.938104239924385,0.720248245844059,3.07768156260773,2.36117078096885,1.3884040159864,1.62773761325285,2.95100741539581,4.67061369468678,1.6455984991348,1.97000956894914,5.91802309684747,3.94739966048397,2.63460138349261,5.90508242545636,2.10289948564127,5.45394445610208,8.92130714056255,5.28901133327089,0.639864751605702,1.39342003116263,3.35055399437443,5.04208811558356,5.33707305227689,5.1360919050391,7.11793592316767,7.24675400785648,7.03738584640755,7.95825888164603,10.3330966173134,4.49409704327111,7.3486936957396,8.96135729644652,0.379335801906163,1.5994791765362,1.1270773567308,1.4255592949172,2.52138233317913,3.92760591385784,5.81776141543167,7.67572769493931,7.84993639206874,9.37818445805684,11.858105083486,2.66952169145751,1.76903095601883,1.79889689907883,2.23146133527353,4.3411888755435,3.05551022137704,4.31544206176216,7.7824908852017,3.56929837144506,7.18841032636773,7.44281895337007,9.04909252032226,7.82994521636046,7.17589654087649,9.64887042726734,5.35784251483154,0.757965647081939,0.488894929326078,0.509235257325564,0.704070744865506,2.1775813467436,2.14239276797412,3.51240566144038,1.57635144106191,2.87904096543407,4.14582398509466,2.94953966488328,4.48980952851328,4.91806799177139,15.0791283939272,12.5098307278303,11.3105782794378,8.00216564283724,1.28440471990234,1.64096361229084,0.491804836130026,3.28212205365685,1.26203287766503,1.17131623288992,0.646270193198397,1.43381278771531,1.11399337041197,1.98153571552183,0.809621403349789,3.21481443702443,1.58115111178609,2.89189184779626,3.69044221541498,2.13678724400706,2.44330439030364,3.29940245945071,11.9470624505967,1.45668381692989,2.72091201268276,1.69744571780308,1.47650946440386,3.99665692327106,4.9101375701962,5.45300594216258,2.85197902707777,3.16036757935816,5.27093042874994,3.09406629744561,2.38307724027652,0.540183282093931,0.517434735131018,0,0.709360934569094,1.07021290561242,1.64549020602121,1.522324745573,4.22409074514679,3.60114520468494,6.3953235435939,5.44124634706884,4.19807509409354,3.1362720962641,4.05865969610664,3.28281799490123,8.16146342563582,1.29797711407357,3.2465467351592,2.47664241555867,3.33350149265481,3.20226376907975,2.87057878214153,2.28778173206523,5.26933132980952,5.59805809294632,6.35719879500349,8.59203556213602,1.26534397432454,2.03319467126849,3.02414954301044,2.71814784818809,4.14888871117737,3.236744313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| ||
|short_description=p3@Znrf2 | |||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p3@Znrf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Znrf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | -96bp_to_ENSMUST00000079869, NM_199143, uc009cae.2_5end |
EntrezGene: | Znrf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.63e-10 | 118 |
endoderm | 2.63e-10 | 118 |
presumptive endoderm | 2.63e-10 | 118 |
digestive system | 3.90e-10 | 116 |
digestive tract | 3.90e-10 | 116 |
primitive gut | 3.90e-10 | 116 |
intestine | 8.23e-10 | 31 |
subdivision of digestive tract | 1.88e-09 | 114 |
mucosa | 8.28e-09 | 15 |
gastrointestinal system | 3.43e-08 | 47 |
intestinal mucosa | 5.07e-08 | 13 |
wall of intestine | 5.07e-08 | 13 |
gastrointestinal system mucosa | 5.07e-08 | 13 |
gut epithelium | 4.34e-07 | 55 |
organ component layer | 4.71e-07 | 24 |