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FFCP PHASE1:Mm9::chr6:83085822..83085868,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:83085822..83085868,+ |short_description=p1@Rtkn |description=CAGE_peak_1_at_Rtkn_5end |association_with_transcript=16bp_to_ENSMUST00000065512_5end |Entrez...")
 
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{{FFCP
{{FFCP
|id=chr6:83085822..83085868,+
|DHSsupport=NA
|short_description=p1@Rtkn
|DPIdataset=NA
|description=CAGE_peak_1_at_Rtkn_5end
|association_with_transcript=16bp_to_ENSMUST00000065512_5end
|EntrezGene=20166
|EntrezGene=20166
|HGNC=
|HGNC=
|MCL_coexpression_id=2301
|TSSclassifier=NA
|UniProt=Q8C6B2
|UniProt=Q8C6B2
|association_with_transcript=16bp_to_ENSMUST00000065512_5end
|cluster_id=chr6:83085822..83085868,+
|description=CAGE_peak_1_at_Rtkn_5end
|id=chr6:83085822..83085868,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,8.69e-07,9;CL:0002251,8.69e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!2.20e-12!128;UBERON:0001555!2.20e-12!128;UBERON:0007026!2.20e-12!128;UBERON:0000160!3.22e-12!43;UBERON:0004119!8.10e-12!130;UBERON:0000925!8.10e-12!130;UBERON:0006595!8.10e-12!130;UBERON:0004921!1.45e-11!126;UBERON:0004185!1.45e-11!126;UBERON:0005409!3.06e-09!59;UBERON:0000344!1.13e-08!15;UBERON:0001242!9.60e-08!13;UBERON:0000060!9.60e-08!13;UBERON:0001262!9.60e-08!13;UBERON:0004786!9.60e-08!13;UBERON:0005178!2.20e-07!17;UBERON:0005181!2.20e-07!17;UBERON:0002224!2.20e-07!17;UBERON:0000915!2.20e-07!17;UBERON:0008947!2.20e-07!17;UBERON:0003258!2.20e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.04e-12,31;UBERON:0001007,1.08e-11,116;UBERON:0001555,1.08e-11,116;UBERON:0007026,1.08e-11,116;UBERON:0004119,4.50e-11,118;UBERON:0000925,4.50e-11,118;UBERON:0006595,4.50e-11,118;UBERON:0004921,7.09e-11,114;UBERON:0000344,6.16e-09,15;UBERON:0005409,8.15e-09,47;UBERON:0001242,5.65e-08,13;UBERON:0001262,5.65e-08,13;UBERON:0004786,5.65e-08,13;UBERON:0005178,1.33e-07,17;UBERON:0005181,1.33e-07,17;UBERON:0002224,1.33e-07,17;UBERON:0000915,1.33e-07,17;UBERON:0008947,1.33e-07,17;UBERON:0003258,1.33e-07,17;UBERON:0003350,8.69e-07,9;UBERON:0004808,8.69e-07,9;UBERON:0001277,8.69e-07,9
|phase1_expression=2.24208385946712,21.6364752736404,12.739978702907,12.7034968748869,9.01612313903425,9.9048770428015,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.78590909317247,0,0,9.75953779039781,9.1763712426868,13.2073351746455,10.3382879078178,10.7735616342945,8.17100703662408,4.28451220591882,4.6563407237614,0.635030673459631,0,0,15.0202842270663,17.1221684719247,14.7001936508906,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.881277725829041,0.709638518536602,0.183546752161682,3.9119567217402,0.65407546914134,0.878744730937887,1.94429899074283,2.93971485413261,4.31257693094915,0,0,0,1.80081605225163,1.43266719969378,1.54701627683233,0,0,0,2.03306719241479,2.66788438833342,0,0,0,1.49800055259202,0.384218305321555,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0,0,3.55913108665965,2.72057616384428,6.66688324013859,0.860423876981386,1.3599426674155,0,1.29955283489534,2.24013443548668,1.40444420131752,0,0,0.35333957451034,4.78867627240714,0,0,0,15.154372870785,14.9482320630308,16.6823066854878,1.1418387971906,0.517875767294343,0.445326417194474,1.21439728736295,0.913396434936424,1.15307748628029,0.452167921657868,1.17588707135705,0.502666365318702,4.94389935468748,0.578397427679647,0,2.42650274921114,0.662524555381181,1.45462575940567,7.45567044872489,0,1.67557365450764,17.1156226989756,0.11981512450592,0,0,1.3481157546434,2.28750301409313,0,0.695297280769106,2.04572365864264,2.49345653471472,3.0825839982874,3.7680564624617,2.98576729464223,5.05445516867349,2.10441855886474,1.04096354370163,1.83921683546778,1.98068342785884,1.50704817835715,1.49680298132921,0.384341160854549,0.843315521037559,1.29351685369508,2.58681591519411,4.34943984385984,3.69497360744293,7.01426343768239,11.9560317167007,9.05455632957633,11.7295817752528,0.796137067273973,0,0,0,0.414251545071004,1.87620847984877,0.900310307305074,1.65721314909647,1.18058539048442,1.85120535464854,1.39520366850245,1.60964040839772,0.700592054203017,1.15191894939436,1.14917224855367,1.37816976227955,1.46199987425332,0.878200461164203,2.14730270016595,1.05144974282064,0.205809224758569,11.5646574044329,15.073682299822,1.2797295032114,1.85789337488351,2.31961430379768,3.63030344322017,4.00280478920767,3.80451252225118,13.7613427847908,6.42325923423642,7.54005626400809,5.96869416123452,4.48417400373976,12.5834717211591,11.4553166433588,14.3381716743144,1.13800740571849,2.85621281524322,4.50830942692322,3.46207257337034,4.84881217919064,7.85521182771568,7.20896523216533,11.0707610984702,8.47793130343424,9.50158162197864,5.63259991465583,1.50160595144485,3.14494392181125,4.49724224769707,3.24576194221605,7.23531479257251,8.40265310878685,10.9324532231308,3.56697498905078,2.19649130550465,5.75072826109418,4.83783231969054,6.24075346229121,5.55673531483646,1.97337154874103,5.30687873499704,6.46636165583116,3.03186258832776,2.44447464663039,2.03694102930226,3.98973422090454,11.0554129911598,10.7119638398706,16.5863600679129,8.51229778173431,5.75808193086815,9.40783135079174,9.5040722535128,10.1884139300878,14.3202567995696,0,0,0.491764273019036,6.34654516500885,0.963303539926752,5.62616095642575,0.163934945376675,2.01976741763498,0.315508219416257,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,0.283076530788832,2.02405350837447,1.16902343164525,0.395287777946524,0.321321316421807,0.567760340833074,2.84904965867608,3.90928702448583,2.3095817216155,1.32745138339963,3.39892890616974,3.02323556964751,2.26326095707078,3.2483208216885,3.99665692327106,4.13485269069154,3.63533729477506,2.13898427030833,4.10847785316561,4.21674434299995,4.12542172992747,1.36175842301515,1.8006109403131,1.68166288917581,1.07168517515796,1.24138163549592,2.31879462882692,1.81003922662333,2.43571959291679,0.23467170806371,1.0591603543191,0.882113592219848,18.7970328353287,11.7869031488011,11.5197686612778,15.757149408414,16.2499490747611,9.91034844541493,1.66882771809459,0,1.03193433981611,0.925972636848558,0.188368457004691,0,0.228778173206523,1.01987057996313,0.69975726161829,1.38199973804424,0,3.32152793260192,3.04979200690273,5.94029374519907,5.64538399239065,4.36725127492355,2.96701562046606,4.21532624199213,1.30877970992015,7.64728342421578,8.07741107013003,0,0.897099276263873,2.97825282822776,3.11121901350476,2.84151611651008,2.87225413334323,1.64300134104056,2.21347454234715,2.41176492179135,0.483168241652012,0,0.632022241256357,6.48720688928525,4.10843828659309,2.85825810551149,2.8644271306797,1.19208812868759,1.32214994471966,1.03382669022204,1.81739609906666,0.762068066549998,0.705783295957884,1.16949456887703,1.05833025804362,1.05189211963412,9.74940649545409,0.443971906748129,0,0,1.15913756419314,7.3196165425961,2.19781949120718,17.1494703263253,2.00628841614145,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0.93408612825759,2.79317411380722,2.90247129782028,4.13281419016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|phase1_expression=2.24208385946712,21.6364752736404,12.739978702907,12.7034968748869,9.01612313903425,9.9048770428015,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.78590909317247,0,0,9.75953779039781,9.1763712426868,13.2073351746455,10.3382879078178,10.7735616342945,8.17100703662408,4.28451220591882,4.6563407237614,0.635030673459631,0,0,15.0202842270663,17.1221684719247,14.7001936508906,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.881277725829041,0.709638518536602,0.183546752161682,3.9119567217402,0.65407546914134,0.878744730937887,1.94429899074283,2.93971485413261,4.31257693094915,0,0,0,1.80081605225163,1.43266719969378,1.54701627683233,0,0,0,2.03306719241479,2.66788438833342,0,0,0,1.49800055259202,0.384218305321555,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0,0,3.55913108665965,2.72057616384428,6.66688324013859,0.860423876981386,1.3599426674155,0,1.29955283489534,2.24013443548668,1.40444420131752,0,0,0.35333957451034,4.78867627240714,0,0,0,15.154372870785,14.9482320630308,16.6823066854878,1.1418387971906,0.517875767294343,0.445326417194474,1.21439728736295,0.913396434936424,1.15307748628029,0.452167921657868,1.17588707135705,0.502666365318702,4.94389935468748,0.578397427679647,0,2.42650274921114,0.662524555381181,1.45462575940567,7.45567044872489,0,1.67557365450764,17.1156226989756,0.11981512450592,0,0,1.3481157546434,2.28750301409313,0,0.695297280769106,2.04572365864264,2.49345653471472,3.0825839982874,3.7680564624617,2.98576729464223,5.05445516867349,2.10441855886474,1.04096354370163,1.83921683546778,1.98068342785884,1.50704817835715,1.49680298132921,0.384341160854549,0.843315521037559,1.29351685369508,2.58681591519411,4.34943984385984,3.69497360744293,7.01426343768239,11.9560317167007,9.05455632957633,11.7295817752528,0.796137067273973,0,0,0,0.414251545071004,1.87620847984877,0.900310307305074,1.65721314909647,1.18058539048442,1.85120535464854,1.39520366850245,1.60964040839772,0.700592054203017,1.15191894939436,1.14917224855367,1.37816976227955,1.46199987425332,0.878200461164203,2.14730270016595,1.05144974282064,0.205809224758569,11.5646574044329,15.073682299822,1.2797295032114,1.85789337488351,2.31961430379768,3.63030344322017,4.00280478920767,3.80451252225118,13.7613427847908,6.42325923423642,7.54005626400809,5.96869416123452,4.48417400373976,12.5834717211591,11.4553166433588,14.3381716743144,1.13800740571849,2.85621281524322,4.50830942692322,3.46207257337034,4.84881217919064,7.85521182771568,7.20896523216533,11.0707610984702,8.47793130343424,9.50158162197864,5.63259991465583,1.50160595144485,3.14494392181125,4.49724224769707,3.24576194221605,7.23531479257251,8.40265310878685,10.9324532231308,3.56697498905078,2.19649130550465,5.75072826109418,4.83783231969054,6.24075346229121,5.55673531483646,1.97337154874103,5.30687873499704,6.46636165583116,3.03186258832776,2.44447464663039,2.03694102930226,3.98973422090454,11.0554129911598,10.7119638398706,16.5863600679129,8.51229778173431,5.75808193086815,9.40783135079174,9.5040722535128,10.1884139300878,14.3202567995696,0,0,0.491764273019036,6.34654516500885,0.963303539926752,5.62616095642575,0.163934945376675,2.01976741763498,0.315508219416257,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,0.283076530788832,2.02405350837447,1.16902343164525,0.395287777946524,0.321321316421807,0.567760340833074,2.84904965867608,3.90928702448583,2.3095817216155,1.32745138339963,3.39892890616974,3.02323556964751,2.26326095707078,3.2483208216885,3.99665692327106,4.13485269069154,3.63533729477506,2.13898427030833,4.10847785316561,4.21674434299995,4.12542172992747,1.36175842301515,1.8006109403131,1.68166288917581,1.07168517515796,1.24138163549592,2.31879462882692,1.81003922662333,2.43571959291679,0.23467170806371,1.0591603543191,0.882113592219848,18.7970328353287,11.7869031488011,11.5197686612778,15.757149408414,16.2499490747611,9.91034844541493,1.66882771809459,0,1.03193433981611,0.925972636848558,0.188368457004691,0,0.228778173206523,1.01987057996313,0.69975726161829,1.38199973804424,0,3.32152793260192,3.04979200690273,5.94029374519907,5.64538399239065,4.36725127492355,2.96701562046606,4.21532624199213,1.30877970992015,7.64728342421578,8.07741107013003,0,0.897099276263873,2.97825282822776,3.11121901350476,2.84151611651008,2.87225413334323,1.64300134104056,2.21347454234715,2.41176492179135,0.483168241652012,0,0.632022241256357,6.48720688928525,4.10843828659309,2.85825810551149,2.8644271306797,1.19208812868759,1.32214994471966,1.03382669022204,1.81739609906666,0.762068066549998,0.705783295957884,1.16949456887703,1.05833025804362,1.05189211963412,9.74940649545409,0.443971906748129,0,0,1.15913756419314,7.3196165425961,2.19781949120718,17.1494703263253,2.00628841614145,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0.93408612825759,2.79317411380722,2.90247129782028,4.13281419016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|short_description=p1@Rtkn
}}
}}

Latest revision as of 18:56, 1 October 2015

Short description:p1@Rtkn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtkn_5end
Coexpression cluster:MCL_coexpression_mm9:2301
Association with transcript: 16bp_to_ENSMUST00000065512_5end
EntrezGene:Rtkn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtkn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H717.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E311.46
intestine, neonate N30.CNhs11131.1384-42G114.34
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D57.21
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H19.50
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E58.51
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H214.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C318.80
skin, neonate N00.CNhs11124.650-25G411.79
skin, neonate N03.CNhs11215.662-22H311.52
skin, neonate N06.CNhs11097.693-20I515.76
skin, neonate N10.CNhs11108.762-6C416.25
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D45.94
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I17.65
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D517.15
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell8.69e-079
epithelial cell of alimentary canal8.69e-079
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