FFCP PHASE1:Mm9::chr7:148890284..148890311,+: Difference between revisions
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|id=chr7:148890284..148890311,+
|short_description=p@chr7:148890284..148890311,+
|description=CAGE_peak_at_chr7:148890284..148890311,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:148890284..148890311,+ | |||
|description=CAGE_peak_at_chr7:148890284..148890311,+ | |||
|id=chr7:148890284..148890311,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.16e-07!9;CL:0002251!3.16e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.94e-13,6;CL:0000677,7.94e-13,6;CL:0000584,7.94e-13,6;CL:0002563,4.84e-11,9;CL:0002251,4.84e-11,9;CL:0000075,6.63e-11,7;CL:0000682,1.90e-07,3;CL:0000066,5.13e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.08e-15!59;UBERON:0000160!4.35e-15!43;UBERON:0000344!2.12e-12!15;UBERON:0001242!1.07e-10!13;UBERON:0000060!1.07e-10!13;UBERON:0001262!1.07e-10!13;UBERON:0004786!1.07e-10!13;UBERON:0004923!9.28e-08!24;UBERON:0003350!3.16e-07!9;UBERON:0004808!3.16e-07!9;UBERON:0001277!3.16e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.19e-47,31;UBERON:0005409,1.26e-34,47;UBERON:0000344,7.94e-24,15;UBERON:0001242,1.54e-19,13;UBERON:0001262,1.54e-19,13;UBERON:0004786,1.54e-19,13;UBERON:0004923,8.65e-14,24;UBERON:0001007,2.30e-12,116;UBERON:0001555,2.30e-12,116;UBERON:0007026,2.30e-12,116;UBERON:0004119,4.86e-12,118;UBERON:0000925,4.86e-12,118;UBERON:0006595,4.86e-12,118;UBERON:0003350,4.84e-11,9;UBERON:0004808,4.84e-11,9;UBERON:0001277,4.84e-11,9;UBERON:0002108,9.05e-11,4;UBERON:0004921,1.87e-10,114;UBERON:0000485,7.32e-09,11;UBERON:0000331,1.96e-08,3;UBERON:0002116,1.96e-08,3;UBERON:0001204,1.96e-08,3;UBERON:0001168,1.96e-08,3 | |||
|phase1_expression=0,2.79180326111489,1.36499771816861,2.11724947914781,2.50447864973174,55.9037975466593,44.3864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2778556505341,59.1875945153299,7.46501553349526,17.6612418425221,31.8897424375116,173.111335124757,48.3897849139067,61.1976209408641,0,0,0,0.866554859253824,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74133216632409,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,11.8751234907822,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0,0,0.323533699894818,0,0,102.515468669967,0,0.209446706813455,109.846533739694,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0,0.205809224758569,55.1799367582943,48.9233548327557,0,0.232236671860439,0.128867461322093,4.63872106633688,8.00560957841533,15.0278244628922,98.7020448012584,44.4687177754829,52.5290586392563,29.2466013900492,35.2884997685607,140.215827750059,489.336544916308,312.054375189593,0,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0,0,0,0,0,0,0,0,0,0.328281799490123,106.973467043155,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,1.74690050996942,0.269728692769641,0.495920734352016,0,140.113786128428,0,0,0,0,0,0.387479470433193,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.655490552289177,0.640251524048693,0.689225627467359,0.476293691283074,0.579421629724277,0.578727661391115,0,0.735994600671987,0.342869252385415,0.354951612318675,0.953744759789284,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.271608227691724,0,0.474540072496697,0.788035859004508,0.818462086339379,0.464810523557898,0,0.249810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0 | |phase1_expression=0,2.79180326111489,1.36499771816861,2.11724947914781,2.50447864973174,55.9037975466593,44.3864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2778556505341,59.1875945153299,7.46501553349526,17.6612418425221,31.8897424375116,173.111335124757,48.3897849139067,61.1976209408641,0,0,0,0.866554859253824,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74133216632409,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,11.8751234907822,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0,0,0.323533699894818,0,0,102.515468669967,0,0.209446706813455,109.846533739694,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0,0.205809224758569,55.1799367582943,48.9233548327557,0,0.232236671860439,0.128867461322093,4.63872106633688,8.00560957841533,15.0278244628922,98.7020448012584,44.4687177754829,52.5290586392563,29.2466013900492,35.2884997685607,140.215827750059,489.336544916308,312.054375189593,0,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0,0,0,0,0,0,0,0,0,0.328281799490123,106.973467043155,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,1.74690050996942,0.269728692769641,0.495920734352016,0,140.113786128428,0,0,0,0,0,0.387479470433193,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.655490552289177,0.640251524048693,0.689225627467359,0.476293691283074,0.579421629724277,0.578727661391115,0,0.735994600671987,0.342869252385415,0.354951612318675,0.953744759789284,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.271608227691724,0,0.474540072496697,0.788035859004508,0.818462086339379,0.464810523557898,0,0.249810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0 | ||
|short_description=p@chr7:148890284..148890311,+ | |||
}} | }} |
Latest revision as of 13:20, 4 August 2015
Short description: | p@chr7:148890284..148890311, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148890284..148890311, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.94e-13 | 6 |
gut absorptive cell | 7.94e-13 | 6 |
enterocyte | 7.94e-13 | 6 |
intestinal epithelial cell | 4.84e-11 | 9 |
epithelial cell of alimentary canal | 4.84e-11 | 9 |
columnar/cuboidal epithelial cell | 6.63e-11 | 7 |
M cell of gut | 1.90e-07 | 3 |
epithelial cell | 5.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.19e-47 | 31 |
gastrointestinal system | 1.26e-34 | 47 |
mucosa | 7.94e-24 | 15 |
intestinal mucosa | 1.54e-19 | 13 |
wall of intestine | 1.54e-19 | 13 |
gastrointestinal system mucosa | 1.54e-19 | 13 |
organ component layer | 8.65e-14 | 24 |
digestive system | 2.30e-12 | 116 |
digestive tract | 2.30e-12 | 116 |
primitive gut | 2.30e-12 | 116 |
endoderm-derived structure | 4.86e-12 | 118 |
endoderm | 4.86e-12 | 118 |
presumptive endoderm | 4.86e-12 | 118 |
epithelium of mucosa | 4.84e-11 | 9 |
gastrointestinal system epithelium | 4.84e-11 | 9 |
intestinal epithelium | 4.84e-11 | 9 |
small intestine | 9.05e-11 | 4 |
subdivision of digestive tract | 1.87e-10 | 114 |
simple columnar epithelium | 7.32e-09 | 11 |
ileal mucosa | 1.96e-08 | 3 |
ileum | 1.96e-08 | 3 |
mucosa of small intestine | 1.96e-08 | 3 |
wall of small intestine | 1.96e-08 | 3 |