FFCP PHASE1:Mm9::chr7:25155485..25155539,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:25155485..25155539,+
|short_description=p4@Kcnn4
|description=CAGE_peak_4_at_Kcnn4_5end
|association_with_transcript=29bp_to_ENSMUST00000167851_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16534 | |EntrezGene=16534 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=887 | |||
|TSSclassifier=NA | |||
|UniProt=D1MQ07 | |UniProt=D1MQ07 | ||
|association_with_transcript=29bp_to_ENSMUST00000167851_5end | |||
|cluster_id=chr7:25155485..25155539,+ | |||
|description=CAGE_peak_4_at_Kcnn4_5end | |||
|id=chr7:25155485..25155539,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.28e-09!32;CL:0002032!8.28e-09!32;CL:0000037!8.28e-09!32;CL:0000566!8.28e-09!32;CL:0000837!8.28e-09!32;CL:0002320!3.80e-08!46;CL:0000134!3.80e-08!46;CL:0002031!1.28e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.97e-07,32;CL:0002032,3.97e-07,32;CL:0000037,3.97e-07,32;CL:0000837,3.97e-07,32;CL:0002320,5.80e-07,46;CL:0000134,5.80e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.86e-13!70;UBERON:0002193!5.09e-13!48;UBERON:0002390!3.39e-12!45;UBERON:0003061!3.39e-12!45;UBERON:0002384!3.80e-08!46;UBERON:0005057!9.85e-08!51;UBERON:0004177!3.12e-07!29;UBERON:0001474!4.19e-07!22;UBERON:0004765!4.19e-07!22;UBERON:0001434!4.19e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-15,48;UBERON:0002405,2.99e-15,48;UBERON:0002390,1.87e-14,45;UBERON:0003061,1.87e-14,45;UBERON:0004177,5.81e-10,29;UBERON:0005057,5.81e-10,29;UBERON:0000077,2.39e-09,35;UBERON:0007811,4.17e-08,36;UBERON:0003929,4.31e-08,55;UBERON:0003408,8.38e-08,24;UBERON:0006562,1.66e-07,24;UBERON:0001557,1.66e-07,24;UBERON:0001042,1.66e-07,24;UBERON:0008814,1.66e-07,24;UBERON:0009145,1.66e-07,24;UBERON:0002384,5.80e-07,46;UBERON:0002370,7.19e-07,23;UBERON:0000974,7.19e-07,23;UBERON:0004807,7.19e-07,23;UBERON:0005058,7.19e-07,23;UBERON:0003351,7.19e-07,23;UBERON:0009113,7.19e-07,23;UBERON:0003295,7.19e-07,23;UBERON:0009722,7.19e-07,23;UBERON:0005562,7.19e-07,23;UBERON:0007690,7.19e-07,23 | |||
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| ||
|short_description=p4@Kcnn4 | |||
}} | }} |
Latest revision as of 09:24, 26 September 2015
Short description: | p4@Kcnn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:887 |
Association with transcript: | 29bp_to_ENSMUST00000167851_5end |
EntrezGene: | Kcnn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.97e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.97e-07 | 32 |
hematopoietic stem cell | 3.97e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.97e-07 | 32 |
connective tissue cell | 5.80e-07 | 46 |
mesenchymal cell | 5.80e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.99e-15 | 48 |
immune system | 2.99e-15 | 48 |
hematopoietic system | 1.87e-14 | 45 |
blood island | 1.87e-14 | 45 |
hemopoietic organ | 5.81e-10 | 29 |
immune organ | 5.81e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 2.39e-09 | 35 |
craniocervical region | 4.17e-08 | 36 |
gut epithelium | 4.31e-08 | 55 |
gland of gut | 8.38e-08 | 24 |
pharynx | 1.66e-07 | 24 |
upper respiratory tract | 1.66e-07 | 24 |
chordate pharynx | 1.66e-07 | 24 |
pharyngeal arch system | 1.66e-07 | 24 |
pharyngeal region of foregut | 1.66e-07 | 24 |
connective tissue | 5.80e-07 | 46 |
thymus | 7.19e-07 | 23 |
neck | 7.19e-07 | 23 |
respiratory system epithelium | 7.19e-07 | 23 |
hemolymphoid system gland | 7.19e-07 | 23 |
pharyngeal epithelium | 7.19e-07 | 23 |
thymic region | 7.19e-07 | 23 |
pharyngeal gland | 7.19e-07 | 23 |
entire pharyngeal arch endoderm | 7.19e-07 | 23 |
thymus primordium | 7.19e-07 | 23 |
early pharyngeal endoderm | 7.19e-07 | 23 |