FFCP PHASE1:Mm9::chr7:51809271..51809325,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:51809271..51809325,-
|short_description=p1@Nr1h2
|description=CAGE_peak_1_at_Nr1h2_5end
|association_with_transcript=0bp_to_ENSMUST00000073488,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22260 | |EntrezGene=22260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=718 | |||
|TSSclassifier=NA | |||
|UniProt=Q60644,Q8BP65 | |UniProt=Q60644,Q8BP65 | ||
|association_with_transcript=0bp_to_ENSMUST00000073488,ENSMUST00000107910,ENSMUST00000107911,ENSMUST00000123358,ENSMUST00000128600,ENSMUST00000132769,ENSMUST00000167197,NM_009473,uc009gpz.1,uc009gqa.1,uc009gqb.1,uc009gqc.1,uc009gqd.1_5end | |||
|cluster_id=chr7:51809271..51809325,- | |||
|description=CAGE_peak_1_at_Nr1h2_5end | |||
|id=chr7:51809271..51809325,- | |||
|ontology_enrichment_celltype=CL:0000063!4.68e-12!66;CL:0000219!4.21e-11!54;CL:0000144!1.67e-09!121;CL:0000012!1.67e-09!121;CL:0002320!2.49e-09!46;CL:0000134!2.49e-09!46;CL:0002371!2.42e-08!118;CL:0002031!7.73e-08!25;CL:0000988!2.68e-07!32;CL:0002032!2.68e-07!32;CL:0000037!2.68e-07!32;CL:0000566!2.68e-07!32;CL:0000837!2.68e-07!32;CL:0000548!3.69e-07!115;CL:0000004!3.69e-07!115;CL:0000255!3.69e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.21e-11,54;CL:0002320,2.49e-09,46;CL:0000134,2.49e-09,46;CL:0002031,7.73e-08,25;CL:0000988,2.68e-07,32;CL:0002032,2.68e-07,32;CL:0000037,2.68e-07,32;CL:0000837,2.68e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-10!51;UBERON:0002384!2.49e-09!46;UBERON:0002204!9.67e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-10,51;UBERON:0002384,2.49e-09,46;UBERON:0000160,7.88e-07,31;UBERON:0002204,9.67e-07,32 | |||
|phase1_expression=49.005547214067,108.880327183481,119.664799959448,101.930439210402,101.180937449162,64.8013989579895,62.3745750390054,93.7435328185844,106.295485224508,102.052133476389,67.459879480849,72.9915254807328,71.2195036513816,98.4353731237911,50.2995740341651,53.4534705909141,57.364074006508,71.2944493709617,69.6541322717153,66.6291753322907,62.5918615511874,67.1206830117985,59.0311523453994,91.0356885694484,82.5873411841812,84.986330689023,96.4906871396328,88.7741478665863,95.0117097281869,88.4625755457357,67.4060752392126,53.9776072440687,55.3558308826113,63.3926724061755,69.9020919798084,55.1899022590195,56.1465729721515,170.760905340658,128.920331846427,109.939986234498,154.116649864126,157.783507025401,118.464526139601,75.7898844212975,75.0189291024408,53.595651631211,148.654355426127,61.9191444120468,84.3594941700372,71.5502028593363,58.2343513961508,79.0639104007344,76.8444335744433,81.9659220472819,91.4175133667502,80.2649440432155,80.8024300627294,89.726944056275,37.8331781807448,34.9134046319542,26.6209189472595,72.5127298627943,88.0401848150028,196.628088225986,330.281365097369,272.824364139302,136.917250506911,144.850301106226,46.3492567018895,49.6821853060622,41.2236924248709,51.9884791614923,46.8241306817421,42.2593257291591,44.6639894944981,35.8495326777908,114.520516239364,63.7159817045087,64.6683505008785,34.686093673041,29.0015830219639,27.0874952689515,84.5924486974184,56.8390236131997,61.119299110724,35.9446874277875,31.1793980950035,32.247104127777,57.9305378998858,52.6733773944295,108.989047751831,49.044160987939,42.8381940235883,84.1936978954995,66.2771945796623,52.8671726774856,66.7110995625821,62.036637418413,39.2276866950332,40.6340510686891,55.6331508117888,50.047326191584,50.9610479413291,63.9960032837998,45.8961006943774,43.8312567271921,39.9364311561679,62.4585822063258,69.395352817442,80.3071972340702,31.4008441446706,54.4993206178733,55.117103844198,48.2312449768392,58.3239987393096,57.9322986029804,65.5066664496091,107.148123477655,60.1535175325915,35.2651732885352,44.1683036920787,46.0631490478461,126.746397628323,47.4304891158706,38.9570874673026,109.591076684486,94.7737634841829,55.7909539823869,75.6067851084735,57.2200242526423,41.1750542536764,20.1046963380583,44.4990259692228,38.8687495142102,58.5962285657959,36.0175604010422,40.9394242678271,57.9736483043033,88.4529654517861,59.5550452158721,29.9277018814219,43.6813998423599,40.6940413360089,33.4564695595287,40.4817169950401,41.3807316520065,39.2610225905264,52.5167842600202,39.664510699643,36.6865795525569,36.9497360744293,32.6601641317086,34.7559061531997,43.879772981793,43.831595054892,28.660934421863,48.4527099246132,48.3814065375664,62.5159698670304,30.2403627901833,37.0551174770132,30.9706745712946,44.7447550256047,33.8434478605535,36.5613057543086,37.2054311600653,41.8506506183406,33.5116532593776,29.78533283434,38.9076889867456,44.6689140597665,49.8541957120383,40.8363214441354,49.2537556850564,41.4271198671331,27.6813407300275,144.39300816392,84.8886318989977,28.3673373211861,27.8684006232526,40.4643828551373,45.9838436141221,50.2574379089407,63.1549078693696,86.3642892011011,56.9858383345078,59.5664444856639,86.3471088658595,69.9921072757641,85.387843822151,70.8932803588997,101.163766813219,44.7616246249273,30.6186013794073,41.7018621990398,32.7878637830956,37.4328300233518,38.2240218402236,45.8464894150865,61.1106012635553,51.1815852762882,59.1072415185425,53.0650202485997,41.8781215347396,44.6188918906971,40.9249044540434,50.1064499829602,51.6119121870172,48.8881635420326,50.9222163287935,53.3424896089866,31.5745625166294,56.0696005456683,58.7982697316235,44.6213872553822,46.4745135422686,42.3377895911713,65.1298753840546,83.5084419553053,27.6657461184908,32.2670653355211,30.3843703537587,42.0095544436419,55.9470899855665,59.7489538623894,55.2228223437571,51.3890569786183,65.3320834463886,51.9822545823408,65.7091892010109,58.3675238706727,72.9031255250818,110.077637275669,83.2175696242626,69.3387624956841,67.3285660983547,73.2110690344331,50.9870836676084,46.8853943777292,52.2614819313052,38.4920027687833,36.3108032195874,41.792139160163,42.0585084396492,50.1297016685387,50.1045459496233,41.6955022725141,41.5003318234063,45.8533822417967,43.378377716944,65.7182594514284,48.7899754048279,42.0248355132226,69.1224815254924,100.886305138372,31.8042633363026,29.6277085825456,32.4400737180145,54.630850182943,40.2740043806545,54.7867981516629,38.5345753246156,39.5712090007041,54.6743591228962,59.0344208019993,59.8186150839484,52.7681388918371,28.0895306688844,38.1608117159126,28.0781515891386,32.4532627565361,35.31702588521,32.2516080380157,55.1081557897425,61.2493158046284,59.9484760544611,79.1696949017313,86.0706240354526,54.4135117965202,39.6859046027266,55.1500229294491,50.883678920969,82.4890767662478,76.9515003343615,65.1018055839819,38.1815705731962,37.9648781107909,50.6711149342619,58.6418236923198,48.2721945465763,99.2674031164115,101.184900030005,108.763379384082,98.3310736555567,30.84275937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| |phase1_expression=49.005547214067,108.880327183481,119.664799959448,101.930439210402,101.180937449162,64.8013989579895,62.3745750390054,93.7435328185844,106.295485224508,102.052133476389,67.459879480849,72.9915254807328,71.2195036513816,98.4353731237911,50.2995740341651,53.4534705909141,57.364074006508,71.2944493709617,69.6541322717153,66.6291753322907,62.5918615511874,67.1206830117985,59.0311523453994,91.0356885694484,82.5873411841812,84.986330689023,96.4906871396328,88.7741478665863,95.0117097281869,88.4625755457357,67.4060752392126,53.9776072440687,55.3558308826113,63.3926724061755,69.9020919798084,55.1899022590195,56.1465729721515,170.760905340658,128.920331846427,109.939986234498,154.116649864126,157.783507025401,118.464526139601,75.7898844212975,75.0189291024408,53.595651631211,148.654355426127,61.9191444120468,84.3594941700372,71.5502028593363,58.2343513961508,79.0639104007344,76.8444335744433,81.9659220472819,91.4175133667502,80.2649440432155,80.8024300627294,89.726944056275,37.8331781807448,34.9134046319542,26.6209189472595,72.5127298627943,88.0401848150028,196.628088225986,330.281365097369,272.824364139302,136.917250506911,144.850301106226,46.3492567018895,49.6821853060622,41.2236924248709,51.9884791614923,46.8241306817421,42.2593257291591,44.6639894944981,35.8495326777908,114.520516239364,63.7159817045087,64.6683505008785,34.686093673041,29.0015830219639,27.0874952689515,84.5924486974184,56.8390236131997,61.119299110724,35.9446874277875,31.1793980950035,32.247104127777,57.9305378998858,52.6733773944295,108.989047751831,49.044160987939,42.8381940235883,84.1936978954995,66.2771945796623,52.8671726774856,66.7110995625821,62.036637418413,39.2276866950332,40.6340510686891,55.6331508117888,50.047326191584,50.9610479413291,63.9960032837998,45.8961006943774,43.8312567271921,39.9364311561679,62.4585822063258,69.395352817442,80.3071972340702,31.4008441446706,54.4993206178733,55.117103844198,48.2312449768392,58.3239987393096,57.9322986029804,65.5066664496091,107.148123477655,60.1535175325915,35.2651732885352,44.1683036920787,46.0631490478461,126.746397628323,47.4304891158706,38.9570874673026,109.591076684486,94.7737634841829,55.7909539823869,75.6067851084735,57.2200242526423,41.1750542536764,20.1046963380583,44.4990259692228,38.8687495142102,58.5962285657959,36.0175604010422,40.9394242678271,57.9736483043033,88.4529654517861,59.5550452158721,29.9277018814219,43.6813998423599,40.6940413360089,33.4564695595287,40.4817169950401,41.3807316520065,39.2610225905264,52.5167842600202,39.664510699643,36.6865795525569,36.9497360744293,32.6601641317086,34.7559061531997,43.879772981793,43.831595054892,28.660934421863,48.4527099246132,48.3814065375664,62.5159698670304,30.2403627901833,37.0551174770132,30.9706745712946,44.7447550256047,33.8434478605535,36.5613057543086,37.2054311600653,41.8506506183406,33.5116532593776,29.78533283434,38.9076889867456,44.6689140597665,49.8541957120383,40.8363214441354,49.2537556850564,41.4271198671331,27.6813407300275,144.39300816392,84.8886318989977,28.3673373211861,27.8684006232526,40.4643828551373,45.9838436141221,50.2574379089407,63.1549078693696,86.3642892011011,56.9858383345078,59.5664444856639,86.3471088658595,69.9921072757641,85.387843822151,70.8932803588997,101.163766813219,44.7616246249273,30.6186013794073,41.7018621990398,32.7878637830956,37.4328300233518,38.2240218402236,45.8464894150865,61.1106012635553,51.1815852762882,59.1072415185425,53.0650202485997,41.8781215347396,44.6188918906971,40.9249044540434,50.1064499829602,51.6119121870172,48.8881635420326,50.9222163287935,53.3424896089866,31.5745625166294,56.0696005456683,58.7982697316235,44.6213872553822,46.4745135422686,42.3377895911713,65.1298753840546,83.5084419553053,27.6657461184908,32.2670653355211,30.3843703537587,42.0095544436419,55.9470899855665,59.7489538623894,55.2228223437571,51.3890569786183,65.3320834463886,51.9822545823408,65.7091892010109,58.3675238706727,72.9031255250818,110.077637275669,83.2175696242626,69.3387624956841,67.3285660983547,73.2110690344331,50.9870836676084,46.8853943777292,52.2614819313052,38.4920027687833,36.3108032195874,41.792139160163,42.0585084396492,50.1297016685387,50.1045459496233,41.6955022725141,41.5003318234063,45.8533822417967,43.378377716944,65.7182594514284,48.7899754048279,42.0248355132226,69.1224815254924,100.886305138372,31.8042633363026,29.6277085825456,32.4400737180145,54.630850182943,40.2740043806545,54.7867981516629,38.5345753246156,39.5712090007041,54.6743591228962,59.0344208019993,59.8186150839484,52.7681388918371,28.0895306688844,38.1608117159126,28.0781515891386,32.4532627565361,35.31702588521,32.2516080380157,55.1081557897425,61.2493158046284,59.9484760544611,79.1696949017313,86.0706240354526,54.4135117965202,39.6859046027266,55.1500229294491,50.883678920969,82.4890767662478,76.9515003343615,65.1018055839819,38.1815705731962,37.9648781107909,50.6711149342619,58.6418236923198,48.2721945465763,99.2674031164115,101.184900030005,108.763379384082,98.3310736555567,30.84275937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| ||
|short_description=p1@Nr1h2 | |||
}} | }} |
Latest revision as of 20:09, 26 September 2015
Short description: | p1@Nr1h2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nr1h2_5end |
Coexpression cluster: | MCL_coexpression_mm9:718 |
Association with transcript: | 0bp_to_ENSMUST00000073488, ENSMUST00000107910, ENSMUST00000107911, ENSMUST00000123358, ENSMUST00000128600, ENSMUST00000132769, ENSMUST00000167197, NM_009473, uc009gpz.1, uc009gqa.1, uc009gqb.1, uc009gqc.1, uc009gqd.1_5end |
EntrezGene: | Nr1h2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.21e-11 | 54 |
connective tissue cell | 2.49e-09 | 46 |
mesenchymal cell | 2.49e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 7.73e-08 | 25 |
hematopoietic cell | 2.68e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.68e-07 | 32 |
hematopoietic stem cell | 2.68e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.68e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-10 | 51 |
connective tissue | 2.49e-09 | 46 |
intestine | 7.88e-07 | 31 |
musculoskeletal system | 9.67e-07 | 32 |