FFCP PHASE1:Mm9::chr9:121614414..121614440,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:121614414..121614440,-
|short_description=p2@Sec22c
|description=CAGE_peak_2_at_Sec22c_5end
|association_with_transcript=142bp_to_ENSMUST00000111560_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=215474 | |EntrezGene=215474 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=312 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BXT9 | |UniProt=Q8BXT9 | ||
|association_with_transcript=142bp_to_ENSMUST00000111560_5end | |||
|cluster_id=chr9:121614414..121614440,- | |||
|description=CAGE_peak_2_at_Sec22c_5end | |||
|id=chr9:121614414..121614440,- | |||
|ontology_enrichment_celltype=CL:0000066!1.95e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.84e-14,6;CL:0000677,4.84e-14,6;CL:0000584,4.84e-14,6;CL:0000075,6.30e-12,7;CL:0000066,5.04e-11,25;CL:0002563,4.17e-09,9;CL:0002251,4.17e-09,9;CL:0000682,6.61e-08,3;CL:0000223,7.90e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.69e-12!59;UBERON:0000160!4.09e-11!43;UBERON:0000344!1.63e-10!15;UBERON:0004923!9.10e-10!24;UBERON:0001242!5.03e-09!13;UBERON:0000060!5.03e-09!13;UBERON:0001262!5.03e-09!13;UBERON:0004786!5.03e-09!13;UBERON:0004119!3.58e-07!130;UBERON:0000925!3.58e-07!130;UBERON:0006595!3.58e-07!130;UBERON:0001007!3.82e-07!128;UBERON:0001555!3.82e-07!128;UBERON:0007026!3.82e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.02e-40,31;UBERON:0005409,2.80e-24,47;UBERON:0000344,6.99e-20,15;UBERON:0001242,3.25e-16,13;UBERON:0001262,3.25e-16,13;UBERON:0004786,3.25e-16,13;UBERON:0004923,2.00e-11,24;UBERON:0001007,9.21e-11,116;UBERON:0001555,9.21e-11,116;UBERON:0007026,9.21e-11,116;UBERON:0004119,1.82e-10,118;UBERON:0000925,1.82e-10,118;UBERON:0006595,1.82e-10,118;UBERON:0004921,4.03e-09,114;UBERON:0003350,4.17e-09,9;UBERON:0004808,4.17e-09,9;UBERON:0001277,4.17e-09,9;UBERON:0002108,4.59e-09,4;UBERON:0000485,2.60e-07,11;UBERON:0000331,7.68e-07,3;UBERON:0002116,7.68e-07,3;UBERON:0001204,7.68e-07,3;UBERON:0001168,7.68e-07,3 | |||
|phase1_expression=0.160148847104794,11.8651638597383,13.6499771816861,17.845388467103,15.0268718983904,2.18243053485457,1.86890112476421,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0,0,0,4.15980299262857,2.98232065387321,12.6331032105304,8.61523992318149,8.61884930743556,1.71021077510736,2.77233142735924,1.33038306393183,0,0,0,0,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.503587271902309,0.304130793658544,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,0.289864488701678,0,8.15965600449301,1.07940638327563,0.649776417447669,2.24013443548668,1.12355536105401,0,0,0,0,0,0,0,0,0,0.505524445014783,1.94112595522402,0,0.29688427812965,0,0,0,0,0,0,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,7.91916871146633,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,21.1468021109631,19.8337924997658,0,0,0.38660238396628,4.03367049246685,7.56085349072559,7.22857379227725,18.506633400236,27.6694243936338,14.3261069016154,15.1206918751275,15.2071987952914,10.7858329038507,7.5648317456143,9.95706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0,0.241177159752417,0,0,0.972811360650212,0,0,0,0,0,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,8.26970538138308,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.361877549568935,0,0.164140899745061,14.8655226681224,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0.276399947608848,0,0,0,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.165306911450672,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.680191150845634,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.463537303779422,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.715308569841963,0.290692833264657,0.846984423737976,0.338458431566706,1.28049581010941,1.05227884575137,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0,0 | |phase1_expression=0.160148847104794,11.8651638597383,13.6499771816861,17.845388467103,15.0268718983904,2.18243053485457,1.86890112476421,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0,0,0,4.15980299262857,2.98232065387321,12.6331032105304,8.61523992318149,8.61884930743556,1.71021077510736,2.77233142735924,1.33038306393183,0,0,0,0,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.503587271902309,0.304130793658544,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,0.289864488701678,0,8.15965600449301,1.07940638327563,0.649776417447669,2.24013443548668,1.12355536105401,0,0,0,0,0,0,0,0,0,0.505524445014783,1.94112595522402,0,0.29688427812965,0,0,0,0,0,0,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,7.91916871146633,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,21.1468021109631,19.8337924997658,0,0,0.38660238396628,4.03367049246685,7.56085349072559,7.22857379227725,18.506633400236,27.6694243936338,14.3261069016154,15.1206918751275,15.2071987952914,10.7858329038507,7.5648317456143,9.95706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0,0.241177159752417,0,0,0.972811360650212,0,0,0,0,0,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,8.26970538138308,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0.361877549568935,0,0.164140899745061,14.8655226681224,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0.276399947608848,0,0,0,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.165306911450672,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.680191150845634,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.463537303779422,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.715308569841963,0.290692833264657,0.846984423737976,0.338458431566706,1.28049581010941,1.05227884575137,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0,0 | ||
|short_description=p2@Sec22c | |||
}} | }} |
Latest revision as of 08:29, 26 September 2015
Short description: | p2@Sec22c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sec22c_5end |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | 142bp_to_ENSMUST00000111560_5end |
EntrezGene: | Sec22c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.84e-14 | 6 |
gut absorptive cell | 4.84e-14 | 6 |
enterocyte | 4.84e-14 | 6 |
columnar/cuboidal epithelial cell | 6.30e-12 | 7 |
epithelial cell | 5.04e-11 | 25 |
intestinal epithelial cell | 4.17e-09 | 9 |
epithelial cell of alimentary canal | 4.17e-09 | 9 |
M cell of gut | 6.61e-08 | 3 |
endodermal cell | 7.90e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.02e-40 | 31 |
gastrointestinal system | 2.80e-24 | 47 |
mucosa | 6.99e-20 | 15 |
intestinal mucosa | 3.25e-16 | 13 |
wall of intestine | 3.25e-16 | 13 |
gastrointestinal system mucosa | 3.25e-16 | 13 |
organ component layer | 2.00e-11 | 24 |
digestive system | 9.21e-11 | 116 |
digestive tract | 9.21e-11 | 116 |
primitive gut | 9.21e-11 | 116 |
endoderm-derived structure | 1.82e-10 | 118 |
endoderm | 1.82e-10 | 118 |
presumptive endoderm | 1.82e-10 | 118 |
subdivision of digestive tract | 4.03e-09 | 114 |
epithelium of mucosa | 4.17e-09 | 9 |
gastrointestinal system epithelium | 4.17e-09 | 9 |
intestinal epithelium | 4.17e-09 | 9 |
small intestine | 4.59e-09 | 4 |
simple columnar epithelium | 2.60e-07 | 11 |
ileal mucosa | 7.68e-07 | 3 |
ileum | 7.68e-07 | 3 |
mucosa of small intestine | 7.68e-07 | 3 |
wall of small intestine | 7.68e-07 | 3 |