FFCP PHASE1:Mm9::chr9:46041182..46041206,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:46041182..46041206,-
|short_description=p@chr9:46041182..46041206,-
|description=CAGE_peak_at_chr9:46041182..46041206,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=309 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:46041182..46041206,- | |||
|description=CAGE_peak_at_chr9:46041182..46041206,- | |||
|id=chr9:46041182..46041206,- | |||
|ontology_enrichment_celltype=CL:0000239!4.11e-08!6;CL:0000677!4.11e-08!6;CL:0000212!4.11e-08!6;CL:0000584!4.11e-08!6;CL:0000181!3.91e-07!5;CL:0000417!3.91e-07!5;CL:0000668!3.91e-07!5;CL:0000412!3.91e-07!5;CL:0000182!3.91e-07!5;CL:0000075!8.63e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.58e-11,6;CL:0000677,5.58e-11,6;CL:0000584,5.58e-11,6;CL:0000223,1.81e-09,20;CL:0000075,2.29e-09,7;CL:0000182,4.27e-09,5;CL:0000066,7.14e-09,25;CL:0002563,3.26e-07,9;CL:0002251,3.26e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.81e-12!43;UBERON:0005409!1.62e-09!59;UBERON:0000344!1.44e-08!15;UBERON:0002107!1.11e-07!22;UBERON:0007499!1.11e-07!22;UBERON:0006925!1.11e-07!22;UBERON:0009497!1.11e-07!22;UBERON:0000015!1.11e-07!22;UBERON:0002423!1.11e-07!22;UBERON:0006235!1.11e-07!22;UBERON:0008835!1.11e-07!22;UBERON:0003894!1.11e-07!22;UBERON:0004161!1.11e-07!22;UBERON:0008836!1.11e-07!22;UBERON:0001007!1.62e-07!128;UBERON:0001555!1.62e-07!128;UBERON:0007026!1.62e-07!128;UBERON:0002365!2.42e-07!25;UBERON:0002330!2.42e-07!25;UBERON:0004119!3.13e-07!130;UBERON:0000925!3.13e-07!130;UBERON:0006595!3.13e-07!130;UBERON:0009854!3.40e-07!23;UBERON:0009856!3.40e-07!23;UBERON:0001242!7.45e-07!13;UBERON:0000060!7.45e-07!13;UBERON:0001262!7.45e-07!13;UBERON:0004786!7.45e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.11e-25,31;UBERON:0005409,5.67e-15,47;UBERON:0004921,4.23e-12,114;UBERON:0001007,8.61e-12,116;UBERON:0001555,8.61e-12,116;UBERON:0007026,8.61e-12,116;UBERON:0004119,1.71e-11,118;UBERON:0000925,1.71e-11,118;UBERON:0006595,1.71e-11,118;UBERON:0002107,1.02e-08,22;UBERON:0007499,1.02e-08,22;UBERON:0006925,1.02e-08,22;UBERON:0009497,1.02e-08,22;UBERON:0000015,1.02e-08,22;UBERON:0002423,1.02e-08,22;UBERON:0006235,1.02e-08,22;UBERON:0008835,1.02e-08,22;UBERON:0003894,1.02e-08,22;UBERON:0004161,1.02e-08,22;UBERON:0008836,1.02e-08,22;UBERON:0009854,2.87e-08,23;UBERON:0009856,2.87e-08,23;UBERON:0002365,1.77e-07,25;UBERON:0002330,1.77e-07,25;UBERON:0003350,3.26e-07,9;UBERON:0004808,3.26e-07,9;UBERON:0001277,3.26e-07,9;UBERON:0001242,5.07e-07,13;UBERON:0001262,5.07e-07,13;UBERON:0004786,5.07e-07,13;UBERON:0003929,8.40e-07,55 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,7.25914107136392,17.0304548181758,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,9.46466264679525,2.719885334831,4.85732872474035,4.54843492213368,4.48026887097336,1.40444420131752,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,5.55346189993443,0,0,0,0.605050573870028,1.55664630691409,5.51654315726422,2.84717436926707,8.39964669092456,9.55073793441024,1.39269530428806,2.53453313254856,4.49409704327111,3.02593269824572,2.19055400579804,0,0,0,0,0,0,0,0,0,0,5.92905254174298,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0,1.79397413521912,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,1.01078884705519,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,1.42888107384922,0,0.192909220463705,0,0.294397840268795,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,1.31753132581463,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,7.25914107136392,17.0304548181758,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,9.46466264679525,2.719885334831,4.85732872474035,4.54843492213368,4.48026887097336,1.40444420131752,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,5.55346189993443,0,0,0,0.605050573870028,1.55664630691409,5.51654315726422,2.84717436926707,8.39964669092456,9.55073793441024,1.39269530428806,2.53453313254856,4.49409704327111,3.02593269824572,2.19055400579804,0,0,0,0,0,0,0,0,0,0,5.92905254174298,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0,1.79397413521912,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,1.01078884705519,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,1.42888107384922,0,0.192909220463705,0,0.294397840268795,1.02860775715625,0.354951612318675,0.476872379894642,0.436039249896986,1.31753132581463,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0,0,0 | ||
|short_description=p@chr9:46041182..46041206,- | |||
}} | }} |
Latest revision as of 05:29, 5 August 2015
Short description: | p@chr9:46041182..46041206, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46041182..46041206, - |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.58e-11 | 6 |
gut absorptive cell | 5.58e-11 | 6 |
enterocyte | 5.58e-11 | 6 |
endodermal cell | 1.81e-09 | 20 |
columnar/cuboidal epithelial cell | 2.29e-09 | 7 |
hepatocyte | 4.27e-09 | 5 |
epithelial cell | 7.14e-09 | 25 |
intestinal epithelial cell | 3.26e-07 | 9 |
epithelial cell of alimentary canal | 3.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.11e-25 | 31 |
gastrointestinal system | 5.67e-15 | 47 |
subdivision of digestive tract | 4.23e-12 | 114 |
digestive system | 8.61e-12 | 116 |
digestive tract | 8.61e-12 | 116 |
primitive gut | 8.61e-12 | 116 |
endoderm-derived structure | 1.71e-11 | 118 |
endoderm | 1.71e-11 | 118 |
presumptive endoderm | 1.71e-11 | 118 |
liver | 1.02e-08 | 22 |
epithelial sac | 1.02e-08 | 22 |
digestive gland | 1.02e-08 | 22 |
epithelium of foregut-midgut junction | 1.02e-08 | 22 |
anatomical boundary | 1.02e-08 | 22 |
hepatobiliary system | 1.02e-08 | 22 |
foregut-midgut junction | 1.02e-08 | 22 |
hepatic diverticulum | 1.02e-08 | 22 |
liver primordium | 1.02e-08 | 22 |
septum transversum | 1.02e-08 | 22 |
liver bud | 1.02e-08 | 22 |
digestive tract diverticulum | 2.87e-08 | 23 |
sac | 2.87e-08 | 23 |
exocrine gland | 1.77e-07 | 25 |
exocrine system | 1.77e-07 | 25 |
epithelium of mucosa | 3.26e-07 | 9 |
gastrointestinal system epithelium | 3.26e-07 | 9 |
intestinal epithelium | 3.26e-07 | 9 |
intestinal mucosa | 5.07e-07 | 13 |
wall of intestine | 5.07e-07 | 13 |
gastrointestinal system mucosa | 5.07e-07 | 13 |
gut epithelium | 8.40e-07 | 55 |